FC876572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL4_ORYSJ (COBRA-like protein 4 OS=Oryza sativa subsp. japonica GN=BC1L9 PE=2 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 3.556e-94 Identity = 153/268 (57.09%), Postives = 203/268 (75.75%), Query Frame = 1 Query: 13 KKEVIWSMMGGQTTKQGDCSKYK--GNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYNEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSL 807 +KEVIWSM G Q +QGDCS K N+PH CKK PTVVDLLPG P + QIANCCK G +S+++QDP + +SFQ+ VG +G +N+TVRVPKNF+L APGPGYTC A + KP++F++ D RR TQ +MTWNV CTYSQFLAQK P+CCVSLSSF N+ V CPTC+CGC+N + +G C+ P L S+++ PG+ +P++QCTSHMCP++++WH+ L E++RVKIT+TN NY MN++ WNLVVQ+ ++TQ+ F YKS+ Sbjct: 79 QKEVIWSMYGAQAIEQGDCSMSKEGSNVPHSCKKHPTVVDLLPGAPIDLQIANCCKAGSLSAFSQDPANSAASFQIIVGHSGNSNETVRVPKNFSLMAPGPGYTCSRAMIVKPSRFLSPDGRRATQVLMTWNVICTYSQFLAQKVPSCCVSLSSFDNDKTVDCPTCSCGCRNEKSTTGKCVKKNAPDLQSIIHGPGRWTWQPLLQCTSHMCPVKINWHLMLKDKEHYRVKITVTNLNYRMNFTEWNLVVQYHPILDITQISGFNYKSI 346
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL6_ARATH (COBRA-like protein 6 OS=Arabidopsis thaliana GN=COBL6 PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 2.923e-80 Identity = 138/270 (51.11%), Postives = 180/270 (66.67%), Query Frame = 1 Query: 16 KEVIWSMMGGQTTKQGDCSKY--KGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP-KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYNEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPY 816 +EVIW M G +TT+QG+CS + GN+PHCC + PT+VDLLPG N Q+ANCC+GGV++S +QD +S+F ++VG++ + +P NF + PG Y+C A PTKF T RR TQA+ TW C YSQF + +P CCVSLS+FY + IV CPTC+CGC S C+ + P + P + P+V+C+ HMCPIR+HWHVK+NY EYWRVKIT TNFN NY+ WNLVV HPN ++ Q+FSF YKSLTPY Sbjct: 88 QEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPG--YSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCS-----SSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPY 350
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL7_ORYSJ (COBRA-like protein 7 OS=Oryza sativa subsp. japonica GN=BC1LP1 PE=3 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 9.106e-74 Identity = 135/278 (48.56%), Postives = 175/278 (62.95%), Query Frame = 1 Query: 4 RGAKKEVIWSMMGGQTTKQGDCSKYKGNI-PHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTT-----NKTVRVPKNFTLKAPGPGYTCGPA-KVGKPTKFITSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYNEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPY 816 R A E+IW M G + T+QGDC + +G PHCC+K P +VDL PGTPYN Q+++CC+GGV+SS Q+ T+ ++FQ+ VG ++ +P F + PG Y+C A KV + R +TW VTCTYSQF+ +PTCCVSLSSFYN TIV CP C+CGC + T + P L + G+ P+ +CT HMCP+RVHWHVK++Y EYWRVK+TITN+N NYS WNLVVQHPN +LTQLFSF Y+ L Y Sbjct: 70 RWAGNEIIWGMTGAEATEQGDCHRIRGATRPHCCEKQPVIVDLPPGTPYNNQVSSCCRGGVLSSLTQNNRTSTAAFQMVVGGFRRATYHDGDRGPALPSRFGVGVPG--YSCSNATKVNATSSERFLLPRARAPCAVTWQVTCTYSQFMEAASPTCCVSLSSFYNSTIVPCPRCSCGCPRSPTAPQCISEGEKPELPA---GDGEAVAPVFRCTDHMCPVRVHWHVKISYREYWRVKVTITNYNQVKNYSDWNLVVQHPNLRSLTQLFSFNYQPLIEY 342
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL5_ARATH (COBRA-like protein 5 OS=Arabidopsis thaliana GN=COBL5 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.515e-44 Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = 1 Query: 4 RGAKKEVIWSMMGGQTTKQGDCSKYKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVISSWAQDPTTALSSFQLSVGAAGTTNKTVRVPKNFTLKAPGPGYTCGPAKVGKPTKFITSDKRRVTQAMMTWNVTCTY 417 RG KKEVIW+M+G +TT QG CS +KGNIP C + PTVVDLLPGTP+NQQIANCCK GV+ ++ S+FQLSVG+AG + KT R+P NF AP Y CGP+K +PT+F T+DKRR+T A+MTWN+TC + Sbjct: 69 RGTKKEVIWNMLGAKTTGQGGCSMFKGNIPQSCVRKPTVVDLLPGTPFNQQIANCCKSGVLKPGSE------SAFQLSVGSAGNSVKTARMPANFMFTAPKQQYICGPSKNVRPTRFTTADKRRITAALMTWNITCVF 200
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL7_ARATH (COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.944e-21 Identity = 70/245 (28.57%), Postives = 110/245 (44.90%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQ----IANCCKGGVISSWAQDPTTALSSFQLSVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN------GTESGSCINPKTPHLASVVN----------TPGKPNRPMVQCTSHMCPIRVHWHVKLNYNEYWRVKITITNFNYAMNYSLWNLVVQHPN 762 C + PTV+DL P T YN I CC+ G I + DP+ + S FQ+ V + P+N+ + P Y CGP P++F+ S A +W V C +Q +P CCVS S+++N++IV C TCACGC +N + S + P+ L N +P + C + C + ++WH+ +Y W ++T+ N+ ++ W VQ N Sbjct: 299 CARRPTVIDL-PPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQ-PKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDN-CGVSINWHLATDYRGGWTARVTVFNWG-ETDFVDWFTAVQMKN 539
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL9_ARATH (COBRA-like protein 9 OS=Arabidopsis thaliana GN=COBL9 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.571e-20 Identity = 63/239 (26.36%), Postives = 103/239 (43.10%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALSSFQLSVGAAGT--TNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFITSDKRRVTQAMM-TWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINP--------------KTPHLASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYNEYWRVKITITNFNYAMNYSLWNLVVQ 753 C++ P ++DL P + + N CC+ G I DP+ ++S F + V + P+N+ +K P Y+CGP PT + ++ +W + C +Q + P CCVS S+F+N++I+ C TCACGC + + S P L N P C + ++WH+ +Y W V+ITI N+ +++ W L VQ Sbjct: 298 CERRPIIIDLPPTKKDDSTLGNIPSCCRNGTILPRIMDPSKSVSVFTMQVAKMPPDFNRSALFPPQNWRIKGTLNPDYSCGPPVRVTPTFYPDPSGMPTNKSSFASWQIVCNITQAKTE-IPKCCVSFSAFFNDSIIPCNTCACGCVSETRRTCSAETPSLLIPPDALLLPFENRTALTLAWNALKHKTLPNPMPCGDNCGVSINWHMASDYRGGWTVRITIFNWG-EIDFPNWFLAVQ 534
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: CBL10_ARATH (COBRA-like protein 10 OS=Arabidopsis thaliana GN=COBL10 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.371e-19 Identity = 69/227 (30.40%), Postives = 99/227 (43.61%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQIAN---CCKGGVISSWAQDPTTALSSFQLSV-GAAGTTNKTVRVPKNFTLKAPG---PGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTE-----SGSCINPKTPHLASVVNTPGK----------PNRPMVQCTSHMCPIRVHWHVKLNYNEYWRVKITITNF 711 C++ P + DL P + CCK G + DP+ + S FQL V N+T P K G P Y CGP P++F S VT A+ +W V C ++ AQ + CCVS S+FYN + V C TCACGC + T+ S + P L N K P + C + C + ++WHV +Y W ++T+ N+ Sbjct: 311 CQRKPAISDLPPEKKEDNMTGKLPFCCKNGTLLPPIMDPSKSRSMFQLQVFKLPPDLNRTALYPPQHW-KIDGVLNPQYKCGPPVRVDPSQFPDPSGLLAVTYAISSWQVVCNITKPKAQAS-RCCVSFSAFYNNSAVPCNTCACGCNDIDTDTCNANSNPLLLPPDALLVPFDNRTLKAKAWAKQNHMPVPKKLPCPDN-CGVSINWHVSTDYKNGWTARLTVFNW 534
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: COBL8_ARATH (COBRA-like protein 8 OS=Arabidopsis thaliana GN=COBL8 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 61/229 (26.64%), Postives = 105/229 (45.85%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQ----QIANCCKGGVISSWAQDPTTALSSFQLSVGAA--GTTNKTVRVPKNFTLKAP-GPGYTCGPAKVGKPTKFI-TSDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPK----TPHLASVVNTPGK----------PNRPM---VQCTSHMCPIRVHWHVKLNYNEYWRVKITITNF 711 C + P ++DL P T YN +I CC+ G I + DP + S FQ+ V ++ P+++ +K P Y CGP ++F TS A +W V C +Q P CCVS SS++N++++ C TCACG ++ + +C P+ A ++ + NR + + C + C + ++WH+ +Y W ++T+ N+ Sbjct: 292 CARRPHIIDL-PLTKYNDTNVGRIPYCCRNGTILPRSMDPEKSKSVFQIEVYKMPPDLNISSITPPQSWQIKGNLNPDYKCGPPLRVSSSQFPDTSGLPSNKSAFASWQVVCNITQ---PTPPKCCVSFSSYFNDSVIPCKTCACGGCSSDRVARTCSTTSPALPLPYQALLIPFDNRTKLTNAWAVLKNRKVPDPLPCGDN-CGVSINWHLATDYRGGWTARVTLFNW 515
BLAST of FC876572 vs. ExPASy Swiss-Prot
Match: CBL11_ARATH (COBRA-like protein 11 OS=Arabidopsis thaliana GN=COBL11 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16 Identity = 65/230 (28.26%), Postives = 102/230 (44.35%), Query Frame = 1 Query: 100 CKKDPTVVDLLPGTPYNQQIAN----CCKGGVISSWAQDPTTALSSFQLSV-GAAGTTNKTVRVP-KNFTLKA-PGPGYTCGPAKVGKPTKFIT-SDKRRVTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKP--NRPM----------------VQCTSHMCPIRVHWHVKLNYNEYWRVKITITNF 711 C+K P + DL P + + CCK G + DP+ + + FQL V N+T P +N+ + P Y CGP T F S + T A+ +W V C ++ Q CCVS S+FYN++ + C TCACGC++ T++ N L +T P NR + + C + C I ++WH+ +Y W ++T+ N+ Sbjct: 301 CQKKPIIKDL-PAERKDDNVTGKLPFCCKNGTLLPTHMDPSKSKAIFQLQVYKVPPDQNRTAFFPPRNWKIDGIVNPTYKCGPPIRVDATPFPDPSGLQATTYAIASWQVICNITKPKPQAA-RCCVSFSAFYNDSAIPCNTCACGCKDIDTDT---CNANARQLLLPTDTLLVPFDNRTLKAKVWAKQKHMAYPKKLPCPDN-CGISLNWHLNSDYGNGWSARVTLFNW 524 The following BLAST results are available for this feature:
BLAST of FC876572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876572 ID=FC876572; Name=FC876572; organism=Citrus clementina; type=EST; length=816bpback to top |