FC876581
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_DANRE (Zinc finger CCCH domain-containing protein 15 OS=Danio rerio GN=zc3h15 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.016e-47 Identity = 105/223 (47.09%), Postives = 138/223 (61.88%), Query Frame = 2 Query: 65 MPPKQQS------KAELAKKQKIVEDKTFGLKNKNKSKNVQKYV-----------QNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD-----KETMEDWDQETLEKVVESKNKEYQQNK-PTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+ + K + KK+KI+EDKTFGLKNK +K QK++ QN +Q + +++K LN+LFK V+ KV GVDPKS+LC F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ K T IVCKYFL+A+E +YGWFWVCP GG + YRHAL G V Sbjct: 1 MPPKKPAPAAANKKTQEKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTQQVKFGQQNARQIAAAESEKTK-----KKDDKKKELSELNELFKPVVAAQKVSKGVDPKSVLCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSLYVDGRDDELLEKDTMENWDEKKLEEVVNKKHGEAEKKKAKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHALPVGFV 217
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: TMA46_YEAST (Translation machinery-associated protein 46 OS=Saccharomyces cerevisiae GN=TMA46 PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 6.583e-47 Identity = 94/203 (46.31%), Postives = 126/203 (62.07%), Query Frame = 2 Query: 65 MPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR---DKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+ +A+ A K+K DKTFG+KNKN+S VQKY++ ++ PK ++ ++ LF V+ +V GVDPKS++C +K G C KG KCKFSHDLNV R+ EK D+Y D R + +TM++WD+E L KV+ SK+ TD VCKYF+EAVE +YGWFW+CPNGG YRH+L G V Sbjct: 1 MPPKKGKQAQAAGKKKDNVDKTFGMKNKNRSTKVQKYIKQVQSQSDPKKEEMRLKKLEEKKRREAEEAERRALFN-PVADQRVRAGVDPKSMVCALFKLGNCNKGAKCKFSHDLNVGRRMEKKDLYQDTRSEKENDTMDNWDEEKLRKVILSKHG--NPKTTTDKVCKYFIEAVENGKYGWFWICPNGGDKCMYRHSLPEGFV 200
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.766e-45 Identity = 100/207 (48.31%), Postives = 127/207 (61.35%), Query Frame = 2 Query: 62 KMPPKQQSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQ-----PKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKET-MEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 K PP K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ P+ D K L +FK +Q KV G DPKS++C F+K G C KG KCKFSHDL+ + K EK IY D RD++ M +WD L++VVE K+ +Q TDI+CK+FLEAVEK +YGWFW CPNGGK YRHAL G V Sbjct: 5 KAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMAL--IFKPVQTQ-KVEKGTDPKSVVCAFFKQGTCTKGDKCKFSHDLSQENKVEKRSIYVDMRDEDDPMTNWDDAKLKEVVEKKSSGEKQRPTTDIICKFFLEAVEKSKYGWFWECPNGGK-CIYRHALPAGYV 206
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.994e-44 Identity = 95/209 (45.45%), Postives = 126/209 (60.29%), Query Frame = 2 Query: 65 MPPKQ-----QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKI--AVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKET--MEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+ K E KK+K++EDKTFGLKNK +K QK++Q +++ VQ + L ++ I V KV G DPKS++C F+K G C KG KCKFSHDL+++ K EK +Y D RD E M +WD L++VV+ K+ E ++ T+I+CK+FLEAVEK +YGWFW CPNG K YRHAL PG V Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQAGGHHPRQDGDKKKDEKEKKLADLREMASIFKPVQTQKVDKGTDPKSVVCAFFKQGLCTKGDKCKFSHDLSLENKVEKRSMYVDMRDNEDDLMTNWDDAKLKEVVDKKHSEEKRRPTTEIICKFFLEAVEKSKYGWFWECPNGEK-CIYRHALPPGYV 207
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEEL (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3) HSP 1 Score: 177.563 bits (449), Expect = 5.216e-44 Identity = 96/207 (46.38%), Postives = 123/207 (59.42%), Query Frame = 2 Query: 65 MPPKQQS---KAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR----DKETMEDWDQETLEKVVESKNKEYQQNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPKQQ K+E +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+D R D+ET E+WD + L +VV KNK DIVCKYFLEAVE +YGWFW CPNGG+ YRH L G V Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNKN-QKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADSREVEKDEETNENWDSDKLNEVVNKKNKNKHM---IDIVCKYFLEAVENNKYGWFWECPNGGEKCQYRHCLPEGYV 203
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEBR (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.569e-40 Identity = 94/214 (43.93%), Postives = 120/214 (56.07%), Query Frame = 2 Query: 65 MPPKQ--QSKAELAKKQKIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNKEYQ------------QNKPTDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPKQ KAE +K+K++EDKTFGLKNK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+DK T E+WD+E L++VV KNK K + VCKYFLEAVE +YGWFW CPNGG YRH L G V Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQVRNNNTRMDLVRQQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADK----TNENWDKEKLDEVVNKKNKGGHVIDIVRDFLMIFALKNQEKVCKYFLEAVENNKYGWFWECPNGGDKCQYRHCLPEGYV 209
BLAST of FC876581 vs. ExPASy Swiss-Prot
Match: MEP33_SCHPO (mRNA export protein 33 OS=Schizosaccharomyces pombe GN=mep33 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.087e-15 Identity = 66/211 (31.28%), Postives = 92/211 (43.60%), Query Frame = 2 Query: 65 MPPKQQSKAE-----LAKKQ--KIVEDKTFGLKNKNKSKNVQKYVQNLKQNVQPKPDQ-SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNKEYQQNKP---TDIVCKYFLEAVEKKQYGWFWVCPNGGKDWHYRHALSPGNV 664 MPPK+ +K + AKK K D TFGLKNKN+S VQ ++ ++QN + +K ++A +P P++ L + ++ +KID+YSD RD++T LEK +P TDIVCK+FLEA E +YGW W CPNG Y+HAL G V Sbjct: 1 MPPKKAAKGKGDPGKAAKKDPTKKAADATFGLKNKNRSTKVQAKIRQIEQNAAASGSKDAKRQEALRKRREEEKRAAEAAKAEVAALFNAIPKKQTPQNFLTRKEEV------------------KESQKIDLYSDVRDQQT-----DLPLEK------------RPWINTDIVCKFFLEACETGKYGWLWQCPNGNMTCIYKHALPYGYV 176 The following BLAST results are available for this feature:
BLAST of FC876581 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876581 ID=FC876581; Name=FC876581; organism=Citrus clementina; type=EST; length=664bpback to top |