FC876599

Overview
NameFC876599
Unique NameFC876599
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig922 contig Ccv1_Contig922:71..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18
Identity = 57/175 (32.57%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQ-HSHLWQQPLNKLFQLFSAGKLK 578
            GLTA   L E  G   G+ VLV+AAAG  G    Q+AKL G  VV   G + K   LK++G D   NYK    ++   K+  P G+D  +++VGG+  N  L  +  +G++ + G IS Y       P   P   E I+ K   + GF + +    + ++ L  L +    GK++
Sbjct:  126 GLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSP---ESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQ 297          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_RABIT (Prostaglandin reductase 1 OS=Oryctolagus cuniculus GN=PTGR1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.290e-17
Identity = 58/175 (33.14%), Postives = 86/175 (49.14%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGF-FLVQHSHLWQQPLNKLFQLFSAGKLK 578
            G+TA   L E  G  SG  VLV AAAG  G    Q+AK+ G  VV   G E K   LK++G D   NYK  + ++   K+  P G+D  +++VGG+  N  ++ +  +GR+ + G IS Y       P   P   E +L +   + GF F      + Q+ L +L      GK++
Sbjct:  126 GITAYFGLLEICGAKSGDTVLVNAAAGAVGAVVGQIAKIKGCRVVGAAGSEEKVDYLKKIGFDFAFNYKTVKSLEETLKKAAPDGYDCYFDNVGGEFSNTVIRQMKKFGRVAICGAISMYNSTGQLPPGPSP---ESVLYQEIRMEGFIFNRWKGEVGQKALKELLTWVLEGKIQ 297          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: YFMJ_BACSU (Putative NADP-dependent oxidoreductase yfmJ OS=Bacillus subtilis GN=yfmJ PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.200e-17
Identity = 58/175 (33.14%), Postives = 87/175 (49.71%), Query Frame = 3
Query:   60 SGLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKL 575
            +GLTA   L   G P  G+ V+V+ AAG  G    Q+AK+ G  VV   G + K   LK EL  D  INYK A+DI+   +   P G D+ +++VGG + +  +  L  + R+ V G IS Y  E        P +  K++     + GF +  +S  + +   +L +   AGKL
Sbjct:  129 TGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAISSYNAESEADDMG-PRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLKAGKL 302          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.902e-17
Identity = 55/178 (30.90%), Postives = 92/178 (51.69%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKV 581
            GLT+ I +++ G     S K ++V+ AAG  G  A Q+  L G + VV  CG   K  LL  ELG D  INYK +++    +E  P G D+ +++VGG++ +  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLK+
Sbjct:  137 GLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYRDKFEPGILQLSQWFKEGKLKI 314          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 55/178 (30.90%), Postives = 91/178 (51.12%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKV 581
            GLT+ I +++ G     S + ++V+ AAG  G  A Q+  L G + VV  CG + K   L  ELG D  +NYK  ++    +E  P G D+ +++VGGD+ N  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLKV
Sbjct:  137 GLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKV 314          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16
Identity = 54/178 (30.34%), Postives = 90/178 (50.56%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKV 581
            GLT+ I +++ G     S + ++V+ AAG  G  A Q+  L G + VV  CG   K   L  ELG D  +NYK  ++    +E  P G D+ +++VGGD+ N  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLK+
Sbjct:  137 GLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSELGFDAAVNYKTGNVAEQLREACPDGVDVYFDNVGGDISNAVISQMNQNSHIILCGQISQYNKDVPYPPPLPPAVEAIQKERNITRERFMVLNYKDRFEPGILQLSQWFKEGKLKI 314          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16
Identity = 54/178 (30.34%), Postives = 91/178 (51.12%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKV 581
            GLT+ I +++ G     S K ++V+ AAG  G  A Q+    G + VV  CG   K  LL  ELG D  INYK +++    +E  P G D+ +++VGG++ +  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLK+
Sbjct:  137 GLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKI 314          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 56/175 (32.00%), Postives = 84/175 (48.00%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKA-EDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQ-HSHLWQQPLNKLFQLFSAGKLK 578
            GLTA   L +  G   G+ V+V AAAG  G    Q+AKL G  VV   G + K   LK+ G D   NYK  E ++   K+  P+G+D  +++VGG+  N     +  +GR+ + G IS Y       P   P   E ++       GF + +    + Q+ L  L +  S GK++
Sbjct:  126 GLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLKKYGFDVAFNYKTIESLEETLKKASPEGYDCYFDNVGGEFSNAVTSQMKKFGRIAICGAISTYNRTGPPPPGPPP---EVVIYNELCFQGFIVTRWQGEVRQKALRDLLKWVSEGKIQ 297          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_HUMAN (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 7.078e-16
Identity = 47/120 (39.17%), Postives = 66/120 (55.00%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQY 416
            GLTA   L E  G   G+ V+V AAAG  G    Q+AKL G  VV   G + K   L++LG D V NYK  E ++   K+  P G+D  +++VGG+  N  +  +  +GR+ + G IS Y
Sbjct:  126 GLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTY 245          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.513e-15
Identity = 70/211 (33.18%), Postives = 103/211 (48.82%), Query Frame = 3
Query:   15 LPVARPDPEVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKE-EFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHS----HLWQQPLNKLFQLFSAGKLKVSLDPRRFVGLDAVADA 629
            +P +    +  A+  S  TA I L+ +A    G+ VLVTAAAG  G  +V LA       V     + K  +++E+G    I+Y  E+IK   KE     G ++I E+VGGD+F  CLK +A  G +I +G  S   GE    P+N       +L K+ +  G +   HS     L ++ ++K  + F  GKLK       F GLD V +A
Sbjct:  146 IPSSLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFGAKVIGASRKEKLVIVQEIGATATIDYTRENIKDKVKELTDGHGANVIMEAVGGDVFKQCLKCIAWNGYIIPVGFAS---GEIPQIPANI------LLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPYISASF-GLDKVNEA 346          
The following BLAST results are available for this feature:
BLAST of FC876599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PTGR1_CAVPO9.877e-1832.57Prostaglandin reductase 1 OS=Cavia porcellus GN=Pt... [more]
PTGR1_RABIT1.290e-1733.14Prostaglandin reductase 1 OS=Oryctolagus cuniculus... [more]
YFMJ_BACSU2.200e-1733.14Putative NADP-dependent oxidoreductase yfmJ OS=Bac... [more]
PTGR2_PONAB4.902e-1730.90Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2... [more]
PTGR2_MOUSE8.362e-1730.90Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2... [more]
PTGR2_RAT1.426e-1630.34Prostaglandin reductase 2 OS=Rattus norvegicus GN=... [more]
PTGR2_HUMAN1.426e-1630.34Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2... [more]
PTGR1_PIG2.433e-1632.00Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 P... [more]
PTGR1_HUMAN7.078e-1639.17Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1... [more]
QORL2_NEMVE3.513e-1533.18Quinone oxidoreductase-like protein 2 homolog OS=N... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DC11RM1 EHR Citrus clementina cDNA clone KN0AAN2DC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876599 ID=FC876599; Name=FC876599; organism=Citrus clementina; type=EST; length=630bp
GCACGAGGCACATTCTTCCTGTGGCAAGACCAGATCCAGAAGTTGTTGCC
ATGCTTACTTCAGGGCTTACAGCTTCAATTGCTCTGGAACAGGCAGGACC
GGCATCTGGAAAAAAGGTGCTTGTTACAGCTGCTGCTGGGGGGACTGGGC
AATTTGCAGTCCAGCTCGCAAAATTAGCAGGAAATACTGTGGTTGCTACT
TGTGGAGGTGAGCATAAGGCCCAGCTTTTGAAAGAACTGGGAGTTGATCG
AGTCATAAACTACAAAGCTGAAGACATTAAAACTGTGTTCAAGGAGGAGT
TTCCCAAAGGTTTTGACATCATTTATGAATCTGTTGGTGGTGACATGTTT
AATCTTTGCTTGAAGGCTTTGGCAGTTTATGGACGGCTTATCGTGATTGG
AATGATTTCCCAGTATCAAGGAGAACATGGATGGCAGCCATCGAATTACC
CTGGATTGTGTGAAAAGATTTTAGCAAAAAGCCAAACTGTGGCTGGCTTT
TTCTTGGTACAACACAGTCACCTGTGGCAGCAACCTCTGAACAAACTCTT
TCAACTGTTCTCTGCAGGAAAGCTCAAGGTATCCCTGGACCCGAGAAGGT
TTGTGGGTCTCGATGCTGTTGCAGATGCTG
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