FC876599
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.588e-15 Identity = 53/178 (29.78%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKV 581 GLT+ I +++ G S + ++V+ AAG G A Q+ +L G + VV CG K L ELG D INYK ++ + P G D+ +++VGGD+ + + + +I+ G ISQY + + P P + ++ T F ++ + ++ + +L Q F GKLK+ Sbjct: 137 GLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKEGNVAEQLHKLCPAGVDVYFDNVGGDISDTVISQMNQNSHIILCGQISQYNKDVPYPPPLPPAIEAIQKERNITRERFLVLNYKDKFEFGILQLSQWFKEGKLKI 314
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: YNCB_ECOLI (Putative NADP-dependent oxidoreductase yncB OS=Escherichia coli (strain K12) GN=yncB PE=3 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15 Identity = 54/153 (35.29%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 63 GLTASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKE-LGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQG-EHGWQPSNYPGLCEKILAKSQTVAGFFLVQ 512 G TA + L G P G+ ++V AA G G Q+ KL G VV GG K + E LG D +++ A+D + PKG DI YE+VGG +F+ L L R+ V G++S Y E P P L +L K + GF + Q Sbjct: 134 GFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQ 286
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: VAT1_MOUSE (Synaptic vesicle membrane protein VAT-1 homolog OS=Mus musculus GN=Vat1 PE=2 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 58/206 (28.16%), Postives = 89/206 (43.20%), Query Frame = 3 Query: 12 ILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQG---------EHGWQPSNYPGLCEKILAKSQTVAGF---FLVQHSHLWQQPLNKLFQLFSAGKLKVSLD 590 ++P A E A+L + +TA + L G G VLV AAGG G A+QL + N V K ++LKE GV I+Y D K+ PKG DI+ + +GG L G+++ GM + G W + L ++L ++ V GF +L L + +L L++ G +K +D Sbjct: 169 LMPEAMTFEEAAALLVNYITAYMVLFDFGNLRPGHSVLVHMAAGGVGMAALQLCRTVENVTVFGTASASKHEVLKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYHLLKPMGKVVTYGMANLLTGPKRNLMAMARTWWNQFSVTAL--QLLQANRAVCGFHLGYLDGEVELVNSVVTRLVALYNQGHIKPRID 372
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: VAT1_HUMAN (Synaptic vesicle membrane protein VAT-1 homolog OS=Homo sapiens GN=VAT1 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.099e-12 Identity = 59/206 (28.64%), Postives = 88/206 (42.72%), Query Frame = 3 Query: 12 ILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQG---------EHGWQPSNYPGLCEKILAKSQTVAGF---FLVQHSHLWQQPLNKLFQLFSAGKLKVSLD 590 ++P A E A+L + +TA + L G G VLV AAGG G AVQL + N V K + LKE GV I+Y D K+ PKG DI+ + +GG L G+++ GM + G W + L ++L ++ V GF +L L + +L L++ G +K +D Sbjct: 156 LIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMAAVQLCRTVENVTVFGTASASKHEALKENGVTHPIDYHTTDYVDEIKKISPKGVDIVMDPLGGSDTAKGYNLLKPMGKVVTYGMANLLTGPKRNLMALARTWWNQFSVTAL--QLLQANRAVCGFHLGYLDGEVELVSGVVARLLALYNQGHIKPHID 359
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.381e-11 Identity = 52/138 (37.68%), Postives = 71/138 (51.45%), Query Frame = 3 Query: 15 LPVARPDP----EVVAMLTSGLTASIALEQAG----PASGKK--VLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVI 398 L V RP E A+ +GLTA AL +GKK +LVTAA+GG G +AVQLAKLA V ATCG + + +K LG D V++YK + K K +D + G F++ L+ G++I I Sbjct: 115 LTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLANAHVTATCGARN-IEFVKSLGADEVLDYKTPE-GAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDI 250
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.019e-11 Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 3 Query: 39 EVVAMLTSGLTASIALE-QAGPASGKKVLVTAAAGGTGQFAVQLA-KLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIK-TVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIG 401 E A+ S TA ALE +A G+ VLVTAAAG TG + +A + V+A G + K QL + G +NY +K V K G +++ + VGGD+F L++LA GR++V+G Sbjct: 139 EAAALPVSYGTAIFALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSSVNYSRGSLKEAVGKLVGSGGVNVVIDMVGGDIFLEALRSLAYEGRIVVVG 262 The following BLAST results are available for this feature:
BLAST of FC876599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876599 ID=FC876599; Name=FC876599; organism=Citrus clementina; type=EST; length=630bpback to top |