FC876603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_CANGA (40S ribosomal protein S23 OS=Candida glabrata GN=RPS23 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.514e-39 Identity = 77/96 (80.21%), Postives = 89/96 (92.71%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + L K+GI++KQPNSAI+KC RVQLIKNGKK+ AFVP+DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 50 KGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_NEUCR (40S ribosomal protein S23 OS=Neurospora crassa GN=rps-23 PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.977e-39 Identity = 76/96 (79.17%), Postives = 88/96 (91.67%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + L K+G++AKQPNSAI+KC RVQLIKNGKK+ AFVP+DGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 50 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_ASPFU (40S ribosomal protein S23 OS=Aspergillus fumigatus GN=rps23 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.373e-39 Identity = 76/96 (79.17%), Postives = 88/96 (91.67%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + L K+G++AKQPNSAI+KC +VQLIKNGKK+ AFVP+DGCLN+I+ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 50 KGIVLEKVGVEAKQPNSAIRKCVKVQLIKNGKKVTAFVPNDGCLNFIDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_CIOIN (40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39 Identity = 77/96 (80.21%), Postives = 86/96 (89.58%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + L KIG++AKQPNSAI+KC RVQLIKNGKKI AFVP+DGCLNYIEENDEVL+AGFGR GHAVGDIPGVRFK+VKV+ VSL ALF KKE+PRS Sbjct: 48 KGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNYIEENDEVLVAGFGRSGHAVGDIPGVRFKIVKVANVSLHALFTGKKERPRS 143
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.754e-39 Identity = 74/96 (77.08%), Postives = 87/96 (90.62%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + L KIG++AKQPNSAI+KC RVQLIKNGKKI AFVP+DGCLN++EENDEVL++GFGR GHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 48 KGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143 HSP 2 Score: 78.1814 bits (191), Expect = 4.905e-14 Identity = 36/60 (60.00%), Postives = 44/60 (73.33%), Query Frame = 1 Query: 106 MGKTRGMGTGRKLKRHRKRQRWADKSYKKSHLGKEWK-KPFAGSSHAKGIVLEENRYQGK 282 MGK +G+ T RKLK HR+ QRW DK YKK+H+G WK PF G+SHAKGIVLE+ + K Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 4.123e-37 Identity = 72/96 (75.00%), Postives = 85/96 (88.54%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + + KIG++AKQPNSAI+KC RVQLIKNGKK+ AFVP DGCLN+++ENDEVL++GFGRKG A GDIPGVRFKVVKV+GV L ALF EKKEKPR+ Sbjct: 48 KGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_GILMI (40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.123e-37 Identity = 72/96 (75.00%), Postives = 86/96 (89.58%), Query Frame = 2 Query: 245 KALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 532 K + L K+G++AKQPNSAI+KC RVQLIKNGKKI AFVP+DGCLN+ EENDEVL+AGFGRK HAVGDIPGVRFKVV+++ VSLLAL+K KE+P+S Sbjct: 48 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFXEENDEVLVAGFGRKXHAVGDIPGVRFKVVEMANVSLLALYKGXKERPKS 143 HSP 2 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 106 MGKTRGMGTGRKLKRHRKRQRWADKSYKKSHLGKEWK-KPFAGSSHAKGIVLEENRYQGK 282 MGK RG+ T RKL+ HR+ Q+W DK YKK+HLG K PF +SHAKGIVLE+ + K Sbjct: 1 MGKCRGLRTARKLRNHRREQKWHDKQYKKAHLGTALKANPFGSASHAKGIVLEKVGVEAK 60
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35 Identity = 76/122 (62.30%), Postives = 87/122 (71.31%), Query Frame = 2 Query: 158 KDKGGLINHTRNPTLAKNGRNHLLALPMQKALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 523 KD+ N L RN + K L KIGI++KQPNSA++KC RV L KN KKIAAFVP DGCLN++ ENDEVL+AG GR+GHAVGDIPGVRFKVV V G+SLLALFK KKEK Sbjct: 20 KDQRWADNDFNKRLLGSRWRNPFMGASHAKGLVTEKIGIESKQPNSAVRKCVRVLLRKNSKKIAAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK 141 HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 32/59 (54.24%), Postives = 40/59 (67.80%), Query Frame = 1 Query: 106 MGKTRGMGTGRKLKRHRKRQRWADKSYKKSHLGKEWKKPFAGSSHAKGIVLEENRYQGK 282 +GK RG+ GRKL RHRK QRWAD + K LG W+ PF G+SHAKG+V E+ + K Sbjct: 3 VGKPRGIRAGRKLARHRKDQRWADNDFNKRLLGSRWRNPFMGASHAKGLVTEKIGIESK 61
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.506e-34 Identity = 66/92 (71.74%), Postives = 82/92 (89.13%), Query Frame = 2 Query: 251 LFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 526 + + ++GI+AKQPNSAI+KC RVQL KNGKKI AFVP+DGCLNYI+END+VL+AG GR GH+VGDIPGVRFKVVKVS VSL+A+++ K+KP Sbjct: 50 IVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIYRGIKDKP 141
BLAST of FC876603 vs. ExPASy Swiss-Prot
Match: RS23_ENCCU (40S ribosomal protein S23 OS=Encephalitozoon cuniculi GN=RPS23 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30 Identity = 64/97 (65.98%), Postives = 74/97 (76.29%), Query Frame = 2 Query: 236 PMQKALFLRKIGIKAKQPNSAIKKCARVQLIKNGKKIAAFVPDDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 526 P KA+ L KIG++AKQPNSAI+K R QLI GKKI AFVP DG + YIE NDEV + GFG+KG +VGDIPG+RFKV KV VSL A+F KKEKP Sbjct: 42 PQAKAIVLEKIGVEAKQPNSAIRKAVRCQLIATGKKITAFVPYDGSVTYIESNDEVTVEGFGKKGRSVGDIPGIRFKVCKVQNVSLHAIFTGKKEKP 138 The following BLAST results are available for this feature:
BLAST of FC876603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876603 ID=FC876603; Name=FC876603; organism=Citrus clementina; type=EST; length=709bpback to top |