FC876655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: NGA4_ARATH (B3 domain-containing transcription factor NGA4 OS=Arabidopsis thaliana GN=NGA4 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.633e-29 Identity = 65/105 (61.90%), Postives = 76/105 (72.38%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD---------RQLYIDWKAR 297 SDVGKLNRLVIPKQHAE FPL+ G +L+F+D GK+WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF+R D + ++IDW+ R Sbjct: 38 SDVGKLNRLVIPKQHAENFFPLEDNQN--GTVLDFQDKNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDNAQPERRRKIMFIDWRPR 140
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: Y8577_ORYSJ (Putative B3 domain-containing protein Os08g0157700 OS=Oryza sativa subsp. japonica GN=Os08g0157700 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.100e-25 Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWK 291 SDVGKLNRLV+PKQHAE+ FP + T L FED G WRFRYSYW SSQSYV+TKGWSRFV+ L AGD VSF R+ G + +ID++ Sbjct: 78 SDVGKLNRLVVPKQHAERFFPAAAAGTQ----LCFEDRAGTPWRFRYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADG--RYFIDYR 165
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: Y6078_ORYSJ (B3 domain-containing protein Os06g0107800 OS=Oryza sativa subsp. japonica GN=Os06g0107800 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.211e-24 Identity = 59/106 (55.66%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSK--GLLLNFEDVTG--KVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVEN 315 SDVGKLNRLV+PK +AEK+FPL + + G +L FED G WRFRYSYW+SSQSYV+TKGWSR+V++K L AGD VSF R+ +L+ID + R V + Sbjct: 44 SDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSFCRA---GARLFIDCRKRAASVSS 146
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: RAVL3_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana GN=At1g51120 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.928e-18 Identity = 62/166 (37.35%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGS-----TSKGLL---LNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPV--QMMRLFGVNIFKIPGNGLVGVDKIGCNINNNNDGKRLREMELLSLECSK 477 SDVGKLNRLVIPK++A K+ P S TS+G+ + F D + W+FRY YW SSQS+V T+GW+ FVKEKNLK DI+ F+ T V N V+ + Q +++ GNG V +++ ++ +D EM+ +L SK Sbjct: 185 SDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFY----------------TCDVPNNVKTLEGQSKTFLMIDVHHFSGNGFVVPEEVNKTVHEISD----EEMKTETLFTSK 330
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: RAVL2_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana GN=At1g50680 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.194e-17 Identity = 44/91 (48.35%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSK-----------GLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFH 249 SDVGKLNRLVIPK++A K+ P S S+ + + F D + W+FRY YW SSQS+V T+GW+ FVKEKNLK D+++F+ Sbjct: 164 SDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFY 254 The following BLAST results are available for this feature:
BLAST of FC876655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876655 ID=FC876655; Name=FC876655; organism=Citrus clementina; type=EST; length=768bpback to top |