FC876665

Overview
NameFC876665
Unique NameFC876665
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length833
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12499 contig Ccv1_Contig12499:552..1384. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.682e-22
Identity = 77/251 (30.68%), Postives = 125/251 (49.80%), Query Frame = 3
Query:   15 KKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKL---FKGKDGELS-VIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEP---------GYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKT--QTSLLTAVVSAGVATLTCYPLDTIRRQMQM---KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRII 713
            KK  G ++     AK+EG+  +W+GN   VIR  P  A+  FA++   KL   FK ++G      G LA+G  AG  S    Y LD  R RLA +           +  ++ V    L+ +G +  Y G  P+++GI  Y  + F +FD +K  +       +   + LL  VV+ G +T + YPLDT+RR+M M   +   Y   ID    IV  +GV  L++G   N L+++  + + ++ +D ++ I+
Sbjct:   54 KKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALN-FAFKDKIKLMFGFKKEEGYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKSSKKGGARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPLVLTGSLDGSFLASFLLGWVVTTGASTCS-YPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGV-ISMYDQLQMIL 301          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: CMC2_MOUSE (Calcium-binding mitochondrial carrier protein Aralar2 OS=Mus musculus GN=Slc25a13 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.197e-22
Identity = 65/225 (28.89%), Postives = 114/225 (50.67%), Query Frame = 3
Query:   51 IAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQV-ALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGV-ATLTCYPLDTIRRQMQMKG----TPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKR 707
            + + EG  G ++G LPQ++ V P  A++L   +  +  F  KDG + ++  + AG CAG +    T PL+++++RL V     T  +V AL+++R+ GF   Y G     +   P+ A+ F  +  VK +   +  Q +  SLL A   AG+ A     P D I+ ++Q+      T Y  V D F  I+  +G   L++G      ++ P   + L T+++++R
Sbjct:  382 VLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMHKDGSVPLLAEIFAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALSVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYNGVTDCFRKILREEGPKALWKGVAARVFRSSPQFGVTLLTYELLQR 606          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.197e-22
Identity = 74/240 (30.83%), Postives = 110/240 (45.83%), Query Frame = 3
Query:   27 GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLF---KGKDGELS-VIGRLAAGACAGMTSTFVTYPLDVLRLRLA---------VEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKA-LPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQM---KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFD 695
            G I+       +EG+   W+GN   VIR  P  A+     + +KK+F   K  DG    + G LA+G  AG TS    Y LD  R RLA          E  +  +  V    +  +G +  Y G GP++ GI  Y  + F ++D +K   L    +     S          A +  YPLDTIRR+M M   +   YKS  DA + IV ++GV  L++G   N L+ +  + + L+ +D
Sbjct:   59 GIIDCFKRTTADEGVMALWRGNTANVIRYFPTQALNFAFRDKFKKMFGYKKDVDGYWKWMAGNLASGGAAGATSLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTIASDGIAGLYRGFGPSVAGIVVYRGLYFGLYDSIKPVLLVGDLKNNFLASFALGWCVTTAAGIASYPLDTIRRRMMMTSGEAVKYKSSFDAASQIVAKEGVKSLFKGAGANILRGVAGAGV-LSIYD 297          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: TPC1_ASPOR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus oryzae GN=tpc1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 72/240 (30.00%), Postives = 113/240 (47.08%), Query Frame = 3
Query:   27 GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGEL--SVIGRLAAGACAGMTSTFVTYPLDVLRLRLA---VEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLT-CYPLDTIRRQMQMKG-----------TPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFD 695
            G +  I  I +EEGI G WKGN+P  +  + Y A+Q  AY T  +     D            AGA AG  +T  TYPLD+LR R A    E  Y ++     ++ + EG   F+ G   A+  I PY+ + F  ++ ++  +   +     +    A V A V   T  +PLD +R+++Q++G             Y+ V +  A IV   G+ GLYRG   +  K  P S++ + T++
Sbjct:   65 GTLPTIRSIVREEGITGLWKGNIPAELMYVCYGAIQFAAYRTTTQALSQLDPYRLPPPAESFVAGATAGGLATASTYPLDLLRTRFAAQGTERVYTSLYASVRDIAQNEGPKGFFRGCSAAVGQIVPYMGLFFATYESLRPVMSGLHDLPFGSGDAAAGVVASVLAKTGVFPLDLVRKRLQVQGPTRSKYVHRNIPEYQGVYNTMAMIVRTQGMRGLYRGLTVSLFKAAPASAVTMWTYE 304          

HSP 2 Score: 68.1662 bits (165), Expect = 6.629e-11
Identity = 48/189 (25.40%), Postives = 87/189 (46.03%), Query Frame = 3
Query:  210 AGACAGMTSTFVTYPLDVLRLRLAVE---------------PGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALP--EKYR-QKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTP--YKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRIIA 716
            AG  AG+ S F   PLDV+++RL ++               P Y+       +++REEG +  + G  PA +    Y A+ F  +    +AL   + YR      S +    + G+AT + YPLD +R +   +GT   Y S+  +   I + +G  G +RG      + +P   +   T++ ++ +++
Sbjct:   20 AGGIAGLVSRFCVAPLDVVKIRLQLQIHSLSDPTSHQNIKGPVYKGTLPTIRSIVREEGITGLWKGNIPAELMYVCYGAIQFAAYRTTTQALSQLDPYRLPPPAESFVAGATAGGLATASTYPLDLLRTRFAAQGTERVYTSLYASVRDIAQNEGPKGFFRGCSAAVGQIVPYMGLFFATYESLRPVMS 208          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: CMC2_HUMAN (Calcium-binding mitochondrial carrier protein Aralar2 OS=Homo sapiens GN=SLC25A13 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.869e-22
Identity = 66/225 (29.33%), Postives = 114/225 (50.67%), Query Frame = 3
Query:   51 IAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQV-ALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGV-ATLTCYPLDTIRRQMQMKG----TPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKR 707
            + + EG  G ++G LPQ++ V P  A++L   +  +  F  KDG + +   + AG CAG +    T PL+++++RL V     T  +V AL+++R+ GF   Y G     +   P+ A+ F  +  VK +   +  Q +  SLL A   AG+ A     P D I+ ++Q+      T Y  VID F  I+  +G   L++G      ++ P   + L T+++++R
Sbjct:  381 VLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDKFMHKDGSVPLAAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALSVVRDLGFFGIYKGAKACFLRDIPFSAIYFPCYAHVKASFANEDGQVSPGSLLLAGAIAGMPAASLVTPADVIKTRLQVAARAGQTTYSGVIDCFRKILREEGPKALWKGAGARVFRSSPQFGVTLLTYELLQR 605          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: YIKC_SCHPO (Uncharacterized mitochondrial carrier PB17E12.12c OS=Schizosaccharomyces pombe GN=SPAPB17E12.12c PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 69/261 (26.44%), Postives = 113/261 (43.30%), Query Frame = 3
Query:   15 KKAIGFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKK--LFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQVALN---------------------MLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTP-----YKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKRII 713
            K+       +  I   EG+ G+++GN    +R  PY AVQ   +   K+  L       L    RL  GA AG  S   TYPLD+ R RL++E    T   +A+N                     +  E G+ + Y+GL   L+ + PY+++ F  F+  K+             L     +  +     +P D +RR+ Q+   P     YK++  A   I + +G+ G +RG+  N LK +P  SI   T++ V +++
Sbjct:   54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNLENHERLLFGAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQHEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADLTAFQKLFLGGFTGIIGQTLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKML 314          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: TPC1_DEBHA (Mitochondrial thiamine pyrophosphate carrier 1 OS=Debaryomyces hansenii GN=TPC1 PE=3 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 72/239 (30.13%), Postives = 115/239 (48.12%), Query Frame = 3
Query:   27 GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKL---FKGKDGELSVIGR----LAAGACAGMTSTFVTYPLDVLRLRLAV--EPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQ-TSLLTAVVSAGVATLTCYPLDTIRRQMQM----KGTPYKSV--IDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFD 695
            G  +    I K EG+K  WKGN+P  I  + Y A+Q  +Y    K    F+  +  L  I      L AG+ +G+ STF TYP D+LR RLA   E  + +MS    ++    G   F  GL P L+ +A    + F  ++L ++     Y+            ++   A    +PLDT+R+++QM    +     S+  I     I++ +G+ G Y+GF  + LK+ P S+I L T++
Sbjct:   63 GASKTFVSICKNEGVKALWKGNVPAEILYILYGAIQFTSYSALSKALSEFEKNNRNLFTISNSTHSLIAGSGSGLASTFFTYPFDLLRTRLAANSEAHFLSMSSTIKSIYEMHGIGGFCKGLTPGLLSVASSTGLMFWSYELARE-FSNNYKDVIPFLEGFCGFIAGATAKGLTFPLDTLRKRIQMLSKTRDIDQNSIKAIQLCKTILKNEGIFGFYKGFSISILKSAPTSAISLFTYE 300          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: TPC1_CANGA (Mitochondrial thiamine pyrophosphate carrier 1 OS=Candida glabrata GN=TPC1 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 73/245 (29.80%), Postives = 124/245 (50.61%), Query Frame = 3
Query:   51 IAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRL---AAGACAGMTSTFVTYPLDVLRLRLAVEPGYQ--TMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVK------KALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQMKGTP-------------YKSVID-AFAGI----VERDGVTGLYRGFVPNALKTLPNSSIRLTTFDI 698
            I K EGI+G+WKGN+P  I  + Y   Q  +Y TY   F     +L++  +L     G+ AGMTS+  +YP DVLR R A     Q   +    + +   EG   F+ G G ++I I    A+ F +++ +K        L ++    T  + L   +S   + L  +PLDT+RR++Q++ +P             YKS  +  F G+    V+++G   LYRG   + +K++P+++I L ++++
Sbjct:   58 ILKREGIRGFWKGNVPGSIMYIIYGGAQFGSY-TYIGSFLRGGLDLNISPQLYSCLVGSLAGMTSSLASYPFDVLRTRFAANSQGQLIKLRDEIMAIWSHEGLMGFFSGCGSSMINIGLNTAIMFGVYESIKIFTEERSKLSDRRDPFTLLNELAGPISGFTSKLATFPLDTVRRRIQIRNSPNEERHDREFTKDIYKSYKNRRFLGVGISMVQQEGPLSLYRGVTMSLIKSVPSTAISLWSYEL 301          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: ADT1_MAIZE (ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3)

HSP 1 Score: 105.145 bits (261), Expect = 4.893e-22
Identity = 69/234 (29.49%), Postives = 108/234 (46.15%), Query Frame = 3
Query:   27 GFIEAITLIAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLF---KGKDGELS-VIGRLAAGACAGMTSTFVTYPLDVLRLRLA---------VEPGYQTMSQVALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKK-ALPEKYRQKTQTSLLTAVVSAGVATLTCYPLDTIRRQMQM---KGTPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSI 677
            G ++      K+EG    W+GN   VIR  P  A+     + +K+LF   K +DG      G LA+G  AG +S F  Y LD  R RLA          E  +  +  V    L+ +G +  Y G   + +GI  Y  + F ++D +K   L    +     S     +    A L  YP+DT+RR+M M   +   YKS +DAF  I++++G   L++G   N L+ +  + +
Sbjct:  133 GIVDCFKRTIKDEGFSSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKGGGERQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSIKPVVLTGNLQDNFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKKEGPKSLFKGAGANILRAIAGAGV 366          
BLAST of FC876665 vs. ExPASy Swiss-Prot
Match: CMC1_MOUSE (Calcium-binding mitochondrial carrier protein Aralar1 OS=Mus musculus GN=Slc25a12 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.391e-22
Identity = 63/225 (28.00%), Postives = 114/225 (50.67%), Query Frame = 3
Query:   51 IAKEEGIKGYWKGNLPQVIRVLPYSAVQLFAYETYKKLFKGKDGELSVIGRLAAGACAGMTSTFVTYPLDVLRLRLAVEPGYQTMSQV-ALNMLREEGFSSFYHGLGPALIGIAPYIAVNFCIFDLVKKALPEKYRQKTQTSLLTAVVSAGV-ATLTCYPLDTIRRQMQMKG----TPYKSVIDAFAGIVERDGVTGLYRGFVPNALKTLPNSSIRLTTFDIVKR 707
            + + EG  G ++G +PQ+I V P  A++L   +  +  F  +DG + +   + AG CAG +    T PL+++++RL V     T  +V ALN+L++ G    Y G     +   P+ A+ F ++   K  L ++  +    +LLTA   AGV A     P D I+ ++Q+      T Y  V+D F  I+  +G +  ++G      ++ P   + L T+++++R
Sbjct:  379 VLRYEGFFGLYRGLIPQLIGVAPEKAIKLTVNDFVRDKFTKRDGSIPLPAEILAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLQDLGLFGLYKGAKACFLRDIPFSAIYFPVYAHCKLLLADENGRVGGINLLTAGALAGVPAASLVTPADVIKTRLQVAARAGQTTYSGVVDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQR 603          
The following BLAST results are available for this feature:
BLAST of FC876665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
ADT3_YEAST1.682e-2230.68ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
CMC2_MOUSE2.197e-2228.89Calcium-binding mitochondrial carrier protein Aral... [more]
ADT_NEUCR2.197e-2230.83ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
TPC1_ASPOR2.869e-2230.00Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
CMC2_HUMAN2.869e-2229.33Calcium-binding mitochondrial carrier protein Aral... [more]
YIKC_SCHPO4.893e-2226.44Uncharacterized mitochondrial carrier PB17E12.12c ... [more]
TPC1_DEBHA4.893e-2230.13Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_CANGA4.893e-2229.80Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
ADT1_MAIZE4.893e-2229.49ADP,ATP carrier protein 1, mitochondrial OS=Zea ma... [more]
CMC1_MOUSE6.391e-2228.00Calcium-binding mitochondrial carrier protein Aral... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DH10RM1 EHR Citrus clementina cDNA clone KN0AAN2DH10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876665 ID=FC876665; Name=FC876665; organism=Citrus clementina; type=EST; length=833bp
GCACGAGGAGTGCCAAGAAGGCAATTGGTTTCATCGAGGCCATCACATTG
ATAGCTAAGGAAGAAGGAATAAAAGGGTACTGGAAAGGCAACCTCCCTCA
GGTGATACGGGTCTTACCTTATAGTGCTGTCCAGCTATTTGCGTATGAAA
CTTACAAGAAACTCTTTAAGGGTAAGGATGGTGAGCTCTCTGTTATTGGA
AGGCTTGCAGCAGGTGCTTGTGCTGGAATGACTTCCACTTTTGTAACATA
TCCTTTAGATGTCCTGAGATTGCGCTTGGCAGTTGAACCAGGCTATCAAA
CCATGTCTCAGGTTGCCTTAAACATGTTACGGGAAGAAGGATTCTCATCC
TTTTACCATGGTCTTGGACCTGCTCTTATTGGAATAGCACCATATATTGC
TGTGAACTTTTGCATTTTTGATTTGGTGAAGAAAGCTTTGCCTGAGAAAT
ATCGACAGAAGACTCAAACATCTCTACTAACAGCTGTGGTGTCAGCGGGT
GTTGCCACACTCACATGCTATCCATTAGACACAATCAGAAGACAAATGCA
AATGAAGGGTACACCTTATAAGTCAGTTATAGATGCCTTTGCTGGTATTG
TGGAACGTGATGGGGTCACTGGGTTGTACAGGGGTTTCGTGCCTAATGCA
TTGAAAACCCTGCCAAACAGCAGCATTAGGCTTACCACCTTTGACATTGT
TAAACGTATAATTGCGGCAAGTGAGAAAGAGTTCCAAAGAATCACAGAGG
AAAATCGCAAGAAACCAAACCACAATGCGAAGATTGAATGATCCTGATTC
TTCACATCGCTAAGTATGAACTGCTTATTTTCT
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