FC876671
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: PJA2_RAT (E3 ubiquitin-protein ligase Praja2 OS=Rattus norvegicus GN=Pja2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 619 PPASK S++ +P V E + A+G E C +C EY ++A E+PC H FH C+ WL G+CPVCR P Sbjct: 605 PPASKESIDGLPETLVLE-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 678
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: PJA2_PONAB (E3 ubiquitin-protein ligase Praja2 OS=Pongo abelii GN=PJA2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 619 PPASK S++ +P V E + A+G E C +C EY ++A E+PC H FH C+ WL G+CPVCR P Sbjct: 606 PPASKESIDGLPETLVLE-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 679
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: PJA2_MOUSE (E3 ubiquitin-protein ligase Praja2 OS=Mus musculus GN=Pja2 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 619 PPASK S++ +P V E + A+G E C +C EY ++A E+PC H FH C+ WL G+CPVCR P Sbjct: 605 PPASKESIDGLPETLVLE-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 678
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: PJA2_HUMAN (E3 ubiquitin-protein ligase Praja2 OS=Homo sapiens GN=PJA2 PE=1 SV=4) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGGE--CVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKMP 619 PPASK S++ +P V E + A+G E C +C EY ++A E+PC H FH C+ WL G+CPVCR P Sbjct: 606 PPASKESIDGLPETLVLE-DHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 679
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: RN181_DROME (E3 ubiquitin-protein ligase CG7694 OS=Drosophila melanogaster GN=CG7694 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.205e-11 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 401 PPASKASVEAMPSIKVGESEEEALGG--ECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCRYKM----PVEEEESGNKRDE 655 P ASK ++ +P ++ +S+E GG EC VC E E G+ R +PCKH+FH CI WL SCP+CRY++ PV EE ++DE Sbjct: 44 PEASKRAILELPVHEIVKSDE---GGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEELRRFRQDE 131
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: RNF38_MOUSE (RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 410 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 +KA +E +PS + S ++ CVVC+ ++E ++ R +PC H+FHA C++KWL +CP+CR Sbjct: 442 TKADIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICR 507
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: RNF38_HUMAN (RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4) HSP 1 Score: 68.5514 bits (166), Expect = 3.507e-11 Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 410 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 +KA +E +PS + + ++ CVVC+ ++E ++ R +PC H+FHA C++KWL +CP+CR Sbjct: 439 TKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 24/66 (36.36%), Postives = 40/66 (60.61%), Query Frame = 2 Query: 410 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 +KA +E +PS + ++ CVVC ++E ++ R +PC H+FH C++KWL +CP+CR Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: RNF44_DANRE (RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.580e-11 Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 2 Query: 410 SKASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMPCKHKFHANCIEKWLGIQGSCPVCR 607 +KA +E +PS + ++ CVVC ++E ++ R +PC H+FHA C++KWL +CP+CR Sbjct: 372 TKADIEQLPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 437
BLAST of FC876671 vs. ExPASy Swiss-Prot
Match: ATL5C_ARATH (RING-H2 finger protein ATL5C OS=Arabidopsis thaliana GN=ATL5C PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11 Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 2 Query: 413 KASVEAMPSIKVGESEEEALGGECVVCLEEYEVGEVAREMP-CKHKFHANCIEKWLGIQGSCPVCRYKMPVEE 628 ++ +E++P + G G EC VCL +E EV R +P CKH FH C++ WL +CP+CRY++ E+ Sbjct: 123 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPED 195 The following BLAST results are available for this feature:
BLAST of FC876671 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876671 ID=FC876671; Name=FC876671; organism=Citrus clementina; type=EST; length=673bpback to top |