FC876731
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 2.983e-45 Identity = 91/155 (58.71%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 2.983e-45 Identity = 91/155 (58.71%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_CHICK (60S ribosomal protein L5 OS=Gallus gallus GN=RPL5 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 3.895e-45 Identity = 90/155 (58.06%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5B_XENLA (60S ribosomal protein L5-B OS=Xenopus laevis GN=rpl5-B PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 5.087e-45 Identity = 90/155 (58.06%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5A_XENLA (60S ribosomal protein L5-A OS=Xenopus laevis GN=rpl5-A PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 5.087e-45 Identity = 90/155 (58.06%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L +D YEG VE TG++Y+VE D F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQVEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_MACFA (60S ribosomal protein L5 OS=Macaca fascicularis GN=RPL5 PE=2 SV=3) HSP 1 Score: 179.104 bits (453), Expect = 8.678e-45 Identity = 90/155 (58.06%), Postives = 108/155 (69.68%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAH+LP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE TG++Y+VE D + F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_TOXCI (60S ribosomal protein L5 OS=Toxoptera citricida GN=RpL5 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.133e-44 Identity = 91/155 (58.71%), Postives = 111/155 (71.61%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RLI QDKNKY+TPKYR +VRF+N+DI Q+ + I GD ++ AAY+HELP+YG++VGLTNYAAAYCTGLL+ARR+LK L +D YEG EA GE+Y VEPAD FR LDVGL+KT+TG RVF IPHS RF G+ + Sbjct: 32 ARKRLIVQDKNKYDTPKYRLIVRFSNRDITCQVAHSRIEGDKIVCAAYSHELPKYGVKVGLTNYAAAYCTGLLVARRLLKKLGLDRLYEGLKEANGEEYYVEPADEGPNAFRCNLDVGLMKTSTGARVFGAMKGAVDGGFNIPHSVKRFPGYDAE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_RAT (60S ribosomal protein L5 OS=Rattus norvegicus GN=Rpl5 PE=1 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 1.133e-44 Identity = 90/155 (58.06%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKYNTPKYR +VR TN+DII QI A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L MD YEG VE G++Y+VE D + F LD GL +TTTGN+VF IPHS RF G+ + Sbjct: 32 ARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSE 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_THEPA (60S ribosomal protein L5 OS=Theileria parva GN=RPL5 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.933e-44 Identity = 92/155 (59.35%), Postives = 112/155 (72.26%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL+ QDKNKY++PKYR VVR TNK +I QIVS+ +VGD V A+A + EL YG++VGLTNYAAAYCTGLLLARR+L L++D ++ G VEA GE Y VE D RRPF+ALLDVG+ TTGNRVF +PHS+ RF G+S D Sbjct: 32 ARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVD 186
BLAST of FC876731 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 1.933e-44 Identity = 92/155 (59.35%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 13 ARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADT-RRPFRALLDVGLIKTTTGNRVFXXXXXXXXXXXXIPHSDXRFAGFSKD 474 AR RL QDKNKYNTPKYR +VR +NKDI QI A I GD V+ AAY+HELP+YG++VGLTNYAAAYCTGLL+ARRVL L +D Y G E TGE+++VEP D FR LDVGL +TTTG RVF IPHS RF G+S + Sbjct: 32 ARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAE 186 The following BLAST results are available for this feature:
BLAST of FC876731 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876731 ID=FC876731; Name=FC876731; organism=Citrus clementina; type=EST; length=476bpback to top |