FC876732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSP 240 RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ +++ +++ + V ++ SP Sbjct: 43 RQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERVQGPTTTTTI-SHAPRGVSESMNSP 121
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.278e-12 Identity = 32/61 (52.46%), Postives = 37/61 (60.66%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 183 RQRPWGKWAAEIRDP + RVWLGTF+T RG KAK+NFP++ P Sbjct: 81 RQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPP 141
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 9.002e-12 Identity = 32/54 (59.26%), Postives = 34/54 (62.96%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 162 RQRPWGKWAAEIRDP K RVWLGTF T RG KAK+NFP+ Sbjct: 65 RQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.176e-11 Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPK------ACLSPVQPSLNQNFNYLNNSDQDYYNNVS----ILEEKPQVNQYGYMGS-FPDDGELGFKPFVPTADDTPVYFNSDQGSNSFDCSDFGWG 480 RQRPWGKWAAEIRDP++ VRVWLGTF+T +RG A++NFP P + K V CL L F+ + + ++ + VS +++++P N + F DD GF + + ++ G N F FG G Sbjct: 91 RQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFP--PPPVTENVEEASTEVKGVSDFIIGGGECLRSPVSVLESPFSGESTAVKEEFVGVSTAEIVVKKEPSFNGSDFSAPLFSDDDVFGFSTSMSESFGGDLF-----GDNLFADMSFGSG 254
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.536e-11 Identity = 39/101 (38.61%), Postives = 48/101 (47.52%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA-------AAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNN 282 RQRPWG+WAAEIRDPT+G RVWLGT++T ++G A NFP T A SV KS LSP + +F +N Sbjct: 102 RQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGGDKSENDVALSPTSVLCDNDFAPFDN 202
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.421e-11 Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQD-YYNNVSILEEKPQVNQYGYMGSFP 366 RQRPWGKWAAEIRDP K VR+WLGT+NT +RG A NF TP A + S K + + S+ + + +S D + VS+L V+++ + S P Sbjct: 126 RQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF-SVTPTTATEKKAPPPSPVKKKKKKNNKSKKSVTASSSISRSSSNDCLCSPVSVLRSPFAVDEFSGISSSP 247
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 44/108 (40.74%), Postives = 54/108 (50.00%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKA-CLSPVQP--SLNQNFNYLNNSDQDYYNNVSI 315 R+RPWG++AAEIRDP R WLGTF+T RG KA+ NF T P+ +++KS P A C P P S QNF Y + Q YN SI Sbjct: 61 RRRPWGRYAAEIRDPMSKERRWLGTFDTAEQAACAYDSAARAFRGAKARTNFTYPTAVIMPEPRFSFSNKKSSPSARCPLPSLPLDSSTQNF-YGAPAAQRIYNTQSI 167
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana GN=ERF12 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11 Identity = 43/119 (36.13%), Postives = 59/119 (49.58%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------DETPAAAPKSSVKANSQ----KSVPKACLSPVQPSLNQNFNY---------LNNSDQDY 297 R+RPWG++AAEIRDP K RVWLGTF+T +RG KAK NFP + P+A ++ AN+Q + + A PV PS + + + LN+ DY Sbjct: 16 RKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFPSPLSLDLNHLPSAPSAATAAANNQPHQHQQLWFAAPPPVPPSSDHHHQHHRIFLRTGVLNDKTSDY 134
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.953e-11 Identity = 36/80 (45.00%), Postives = 43/80 (53.75%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------DETPAAAPKSSVKANSQKSV 219 RQRPWGK+AAEIRDP + RVWLGTF T RG +AK+NFP +P AA KA++ SV Sbjct: 140 RQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASV 219 The following BLAST results are available for this feature:
BLAST of FC876732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876732 ID=FC876732; Name=FC876732; organism=Citrus clementina; type=EST; length=769bpback to top |