FC876749

Overview
NameFC876749
Unique NameFC876749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 73/145 (50.34%), Postives = 95/145 (65.52%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCE-DAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F +II N GI TE DYPYK     C+ + +      I ++EDV PN E +L +AVA QPVS+ IE  G  FQ Y  GIF   CGT   H VA VG+G TE+G  YW+++NSWG+ WGE+GY+R+ R++ A  G CGIA +PSYP+
Sbjct:  201 FDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGKCGTALDHGVAAVGYG-TENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPL 344          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 72/147 (48.98%), Postives = 102/147 (69.39%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAK---ISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            +++I+KN G+ T+ DYPYK V G C D ++K   K   I  +E++  NDE AL++AVA QPV+  I+ S  +FQ Y+ G+F+  CGT  +H V +VG+G TE+G  YWL+KNS G  WGEAGYM++ R++  P GLCGIA + SYP+
Sbjct:  208 YEFIMKNGGLGTDNDYPYKAVNGVC-DGRLKENNKNVMIDGYENLPANDESALMKAVAHQPVTAVIDSSSREFQLYESGVFDGSCGTNLNHGVVVVGYG-TENGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLCGIAMRASYPL 352          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 8.789e-36
Identity = 71/143 (49.65%), Postives = 97/143 (67.83%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII N GI T+ +YPY  VQG+C+  +++V + I+ F+ V  N+E AL  AVA QPVS+ +E +G  FQ Y  GIF   CGT  +H V IVG+G T+ G  YW+++NSWG+ WG  GY+ + R+V +  GLCGIA  PSYP
Sbjct:   72 FQYIITNGGIDTQQNYPYSAVQGSCKPYRLRVVS-INGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTAQNHGVVIVGYG-TQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYP 212          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 149.058 bits (375), Expect = 1.958e-35
Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 2
Query:   11 GFKYIIKNQGIATEADYPYKEVQGTCE-DAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            GF++II N GI TE +YPY    G C  D Q +    I  +E+V  N+E AL  AV  QPVS+ ++ +G  F+ Y  GIF   CGT   HAV IVG+G TE G+ YW++KNSW   WGE GYMRILR+V    G CGIAT PSYPV
Sbjct:  199 GFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKQYSSGIFTGPCGTAVDHAVTIVGYG-TEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG-AGTCGIATMPSYPV 342          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35
Identity = 64/145 (44.14%), Postives = 99/145 (68.28%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            + + +II N+G+A+ A YPYK  +GTC+   V  +A I+ +  V+ N+E+ ++ AV+ QP++  ++ SG +FQ YK G+F   CGT+ +HA+ I+G+G    G K+W+++NSWG  WGE GY+R+ RDV +  GLCGIA  P YP
Sbjct:  191 KAYSFIISNKGVASAAIYPYKAAKGTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDASG-NFQHYKRGVFTGPCGTRLNHAIVIIGYGQDSSGKKFWIVRNSWGAGWGEGGYIRLARDVSSSFGLCGIAMDPLYP 334          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35
Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 2
Query:   11 GFKYIIKNQGIATEADYPYKEVQGTCE-DAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            GF++II N GI TE +YPY    G C  D Q +    I  +E+V  N+E AL  AV  QPVS+ ++ +G  F+ Y  GIF   CGT   HAV IVG+G TE G+ YW++KNSW   WGE GYMRILR+V    G CGIAT PSYPV
Sbjct:  199 GFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAVTYQPVSVALDAAGDAFKHYSSGIFTGPCGTAIDHAVTIVGYG-TEGGIDYWIVKNSWDTTWGEEGYMRILRNVGG-AGTCGIATMPSYPV 342          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 69/144 (47.92%), Postives = 95/144 (65.97%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCE-DAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YI+KN G+  E DYPY   +GTCE          I+  +DV  NDE++LL+A+A QP+S+ I+ SG +FQ Y GG+F+  CG    H VA VG+G+++ G  Y ++KNSWG KWGE GY+R+ R+   PEGLCGI    S+P
Sbjct:  210 FEYIVKNGGLRKEEDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGRCGVDLDHGVAAVGYGSSK-GSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMASFP 352          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.362e-35
Identity = 68/147 (46.26%), Postives = 102/147 (69.39%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAK---ISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            +++I+ N G+ T+ DYPYK + G CE  ++K   K   I  +E++  NDE AL++AVA QPV+  ++ S  +FQ Y+ G+F+  CGT  +H V +VG+G TE+G  YW++KNS G+ WGEAGYM++ R++  P GLCGIA + SYP+
Sbjct:  215 YEFIMNNGGLGTDNDYPYKALNGVCE-GRLKEDNKNVMIDGYENLPANDEAALMKAVAHQPVTAVVDSSSREFQLYESGVFDGTCGTNLNHGVVVVGYG-TENGRDYWIVKNSRGDTWGEAGYMKMARNIANPRGLCGIAMRASYPL 359          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 62/145 (42.76%), Postives = 94/145 (64.83%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            + + +II N G+ TE +YPY   QGTC       +A I+ +  V+ NDE++++ AV+ QP++  I+ S  +FQ Y GG+F+  CGT  +HA+ I+G+G    G KYW+++NSWG  WGE GY+R+ R V +  G+CGIA  P +P
Sbjct:  191 KAYDFIISNNGVTTEENYPYLAYQGTCNANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDAS-ENFQYYNGGVFSGPCGTSLNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGIAMAPLFP 334          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34
Identity = 69/145 (47.59%), Postives = 93/145 (64.14%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDA-QVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I+KN G+ TE DYPY    G C    +      I  +EDV   DE AL +AV+ QPVS+ I+  G  FQ Y+ GIF   CGT   HAV  VG+G +E+G+ YW+++NSWG +WGE GY+R+ R+V +  G CGIA + SYPV
Sbjct:  172 FQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGKCGTNMDHAVVAVGYG-SENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315          
The following BLAST results are available for this feature:
BLAST of FC876749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
ORYA_ORYSJ3.021e-3650.34Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CPR3_ARATH3.021e-3648.98Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
ERVB_TABDI8.789e-3649.65Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
ACTN_ACTCH1.958e-3552.05Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
ANAN_ANACO2.557e-3544.14Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
ACTN_ACTDE2.557e-3552.05Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
XCP2_ARATH3.340e-3547.92Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CPR4_ARATH4.362e-3546.26Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
BROM1_ANACO9.717e-3542.76Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP4_BRANA3.693e-3447.59Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AD10RM1 EHR Citrus clementina cDNA clone KN0AAN3AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876749 ID=FC876749; Name=FC876749; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
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