FC876749

Overview
NameFC876749
Unique NameFC876749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24
Identity = 61/152 (40.13%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG---ATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            AR F+Y+ +N G+ +E  YPY  V   C+       A  + F  V P  E+AL++AVA + P+S+ ++     FQ YK GI F   C ++   H V +VG+G   A  +  KYWL+KNSWG +WG  GY++I +D       CGIAT  SYP
Sbjct:  184 ARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKD---KNNHCGIATAASYP 332          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 58/148 (39.19%), Postives = 83/148 (56.08%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYK-EVQGTCEDAQVKVA--AKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCS-HAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F++I +N GI ++  Y Y  E    C+  ++K      I+  E V  NDE +L +AVA QP+S+ I  S  +   YK G++   C      H V IVG+G + D   YWLI+NSWG +WGE GY+R+ R+   P G C +A  P YP+
Sbjct:  201 FEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMI--SAANMSDYKSGVYKGACSNLWGDHNVLIVGYGTSSDEGDYWLIRNSWGPEWGEGGYLRLQRNFHEPTGKCAVAVAPVYPI 346          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 61/145 (42.07%), Postives = 85/145 (58.62%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNR-GCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII N GI +EA YPYK + G C     K AA  S + ++    E AL +AVA + PVS+ I+ S   F  Y+ G++    C    +H V +VG+G   +G  YWL+KNSWG  +G+ GY+R+ R+       CGIA+ PSYP
Sbjct:  189 FQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGNL-NGKDYWLVKNSWGLNFGDQGYIRMARN---SGNHCGIASYPSYP 329          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24
Identity = 62/145 (42.76%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIF-NRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII N GI +EA YPYK + G C+      AA  S + ++    E+AL +AVA + PVS+ I+ S   F  YK G++ +  C    +H V +VG+G   DG  YWL+KNSWG  +G+ GY+R+ R+       CGIA  PSYP
Sbjct:  189 FQYIIDNNGIDSEASYPYKAMDGKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGNL-DGKDYWLVKNSWGLHFGDQGYIRMARN---SGNHCGIANYPSYP 329          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.717e-24
Identity = 62/147 (42.18%), Postives = 87/147 (59.18%), Query Frame = 2
Query:   20 YIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNRGCGTQC--SHAVAIVGFGAT---EDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            Y+++N G+ +EA YPY+E  G+C  +     A I+ FE V P +E AL+ AVA + P+S+ I+     F  YK GI+     + C  +H++ +VG+G T    DG KYWL+KNS G +WG  GYM+I RD       CGIAT   YP
Sbjct:  189 YVMENGGLESEATYPYEEKDGSCRYSPENSTANITGFEFV-PKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTGRESDGRKYWLVKNSMGTQWGNKGYMKISRD---KGNHCGIATYALYP 331          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 3.830e-23
Identity = 59/150 (39.33%), Postives = 88/150 (58.67%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGF---GATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+YI +N G+ +E  YPY+   G+C+       A  + F D+ P  E+AL++AVA + P+S+ ++ S P  Q Y  GI +   C ++   H V +VG+   G   +  KYWL+KNSWG +WG  GY++I +D D     CG+AT  SYPV
Sbjct:  187 FQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRD---NHCGLATAASYPV 332          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23
Identity = 60/153 (39.22%), Postives = 87/153 (56.86%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNRGCGTQC-----SHAVAIVGFG---ATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+Y+  N G+ATE  YPY+     C       AA + +F  + P  E+AL++AVA + P+S+ ++ S   FQ Y  GI+      QC     +HAV +VG+G      DG  +WL+KNSWGE+WG  GYM++ +D       CGIAT  +YP+
Sbjct:  187 FQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDFVQI-PGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYE---PQCKRVHLNHAVLVVGYGFEGEESDGNSFWLVKNSWGEEWGMKGYMKLAKDW---SNHCGIATYSTYPI 332          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.002e-23
Identity = 57/145 (39.31%), Postives = 86/145 (59.31%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIF-NRGCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII N+GI +EA YPYK     C+      AA  S + ++    E  L +AVA + PV + ++ S P F  Y+ G++ +  C  + +H V ++G+G   +G +YWL+KNSWG  +GE GY+R+ R+       CGIA+ PSYP
Sbjct:  188 FQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGDL-NGKEYWLVKNSWGSNFGEQGYIRMARN---KGNHCGIASYPSYP 328          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.533e-23
Identity = 57/146 (39.04%), Postives = 86/146 (58.90%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YI +N G+ +E  YPY+    +C       AAK + F D+ P  E+AL++AVA + P+S+ I+     FQ YK GI+ +  C ++   H V +VG+G      K+W++KNSWG +WG  GY+++ +D       CGIAT  SYP
Sbjct:   74 FQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDI-PQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTNNKFWIVKNSWGPEWGNKGYVKMAKD---QNNHCGIATAASYP 215          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.533e-23
Identity = 61/153 (39.87%), Postives = 87/153 (56.86%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNRGCGTQC-----SHAVAIVGFG---ATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+Y+  N G+ATE  YPY      C       AA + +F  + P  E+AL++AVA + P+S+ ++ S   FQ Y  GI+      QC     +HAV +VG+G      DG  YWL+KNSWGE+WG  GY++I +D +     CGIAT  +YP+
Sbjct:  187 FQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDFVQI-PGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYE---PQCKRVHLNHAVLVVGYGFEGEESDGNSYWLVKNSWGEEWGMKGYIKIAKDWN---NHCGIATLATYPI 332          
The following BLAST results are available for this feature:
BLAST of FC876749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATL2_HUMAN3.464e-2440.13Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CPR2_ARATH5.909e-2439.19Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATS_CANFA5.909e-2442.07Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATS_BOVIN7.717e-2442.76Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATM_MOUSE7.717e-2442.18Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATL1_MOUSE3.830e-2339.33Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
TEST2_RAT5.002e-2339.22Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATS_SAIBB5.002e-2339.31Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATL1_SHEEP6.533e-2339.04Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
TEST2_MOUSE8.533e-2339.87Testin-2 OS=Mus musculus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AD10RM1 EHR Citrus clementina cDNA clone KN0AAN3AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876749 ID=FC876749; Name=FC876749; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
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