FC876749

Overview
NameFC876749
Unique NameFC876749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.533e-23
Identity = 58/158 (36.71%), Postives = 91/158 (57.59%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDE-------QALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQCS------HAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            + F++++++ GIAT+ DYPY+  +G C+  +++    I  +E +  +DE       QA L A+  QP+S+ I+    DF  Y GGI++   G  C+      H V +VG+G+  DG+ YW+ KNSWG  WGE GY+ I R+     G+CG+    SYP
Sbjct:  204 QSFEWVLEHGGIATDDDYPYRAKEGRCKANKIQDKVTIDGYETLIMSDESTESETEQAFLSAILEQPISVSIDAK--DFHLYTGGIYD---GENCTSPYGINHFVLLVGYGSA-DGVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYP 355          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.533e-23
Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKV---AAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNR-GCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            + F+Y+  N GI +E  YPY       ED + K    AA  + F D+    E+AL++AVA + PVS+ I+     FQ Y+ GI+    C ++   H V +VG+G  E G KYW++KNSWGEKWG+ GY+ + +D    +  CGIAT  SYP+
Sbjct:   72 QAFQYVQDNGGIDSEESYPYTAKDD--EDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGF-EGGKKYWIVKNSWGEKWGDKGYIYMAKD---RKNHCGIATAASYPL 217          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.455e-22
Identity = 61/145 (42.07%), Postives = 83/145 (57.24%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNR-GCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII N GI  +A YPYK     C       AA  S +  +   DE AL +AVA + PVS+ I+ S   F  YK G+++   C    +H V +VG+G T DG  YWL+KNSWG  +G+ GY+R+ R+    +  CGIA+  SYP
Sbjct:  198 FQYIIDNGGIEADASYPYKATDEKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYG-TLDGKDYWLVKNSWGLNFGDQGYIRMARN---NKNHCGIASYCSYP 338          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.455e-22
Identity = 57/145 (39.31%), Postives = 85/145 (58.62%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNR-GCGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+YII N+GI ++A YPYK +   C+      AA  S + ++    E  L +AVA + PVS+ ++   P F  Y+ G++    C    +H V +VG+G   +G +YWL+KNSWG  +GE GY+R+ R+       CGIA+ PSYP
Sbjct:  189 FQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARN---KGNHCGIASFPSYP 329          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.455e-22
Identity = 57/150 (38.00%), Postives = 88/150 (58.67%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGF---GATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+YI +N G+ +E  YPY+   G+C+       A  + F D+ P  E+AL++AVA + P+S+ ++ S P  Q Y  GI +   C ++   H V +VG+   G   +  KYWL+KNSWG++WG  GY++I +D       CG+AT  SYP+
Sbjct:  187 FQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVDI-PQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGYIKIAKD---RNNHCGLATAASYPI 332          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.483e-22
Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG--ATE-DGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+  N G+ +E  YPY+  + +C+       A  + F D+ P  E+AL++AVA + P+S+ I+     F  YK GI F   C ++   H V +VG+G  +TE D  KYWL+KNSWGE+WG  GY+++ +D       CGIA+  SYP
Sbjct:  187 FQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKD---RRNHCGIASAASYP 331          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.483e-22
Identity = 58/152 (38.16%), Postives = 89/152 (58.55%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIF-NRGC---GTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI+ N+GI  E  YPY     +C     K  A + N  ++  NDE A+++AVA+  PVS   E +  DF  YK G++ ++ C     + +HAV  VG+G  ++G+ YW++KNSWG +WGE GY  I R     + +CG+A   SYP+
Sbjct:  185 SQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVT-EDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLIERG----KNMCGLAACASYPI 330          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY+ V G C+     V  K+ +  ++    E  L  AV + +PVS+  E     F+ YK G++    CGT     +HAV  VG+G  EDG+ YWLIKNSWG  WG+ GY +    ++  + +CG+AT  SYP+
Sbjct:  213 SQAFEYIKYNGGLDTEESYPYQGVNGICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVI-TGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDEGYFK----MEMGKNMCGVATCASYPI 358          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22
Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNR-GCGTQ-CSHAVAIVGF---GATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y++ N G+ +EA YPY+   G C        A+I+ F  + P  E  L+ AVA + P++  I+ S   F++YKGGI++   C +   +H V +VG+   G   DG  YWLIKNSWG++WG  GYM++ +D       CGIA+   YP
Sbjct:  188 FQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKAEITGFVSL-PQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKD---KNNHCGIASYAHYP 332          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.235e-22
Identity = 58/146 (39.73%), Postives = 90/146 (61.64%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+  N+GI +E  YPY     +C  +    AAK   + ++  ++E+AL +AVA + PVS+ I+ S P FQ Y  G++ + GC  +  +HAV  VG+GA + G K+W+IKNSWG +WG  GY+ + R++   +  CGIA   S+P
Sbjct:  191 FEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGA-QKGTKHWIIKNSWGTEWGNKGYVLLARNM---KQTCGIANLASFP 332          
The following BLAST results are available for this feature:
BLAST of FC876749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
P34_SOYBN8.533e-2336.71P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CATL1_CHICK8.533e-2340.79Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATS_MOUSE1.455e-2242.07Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATS_HUMAN1.455e-2239.31Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATL1_RAT1.455e-2238.00Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CATL1_CERAE2.483e-2239.60Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATH_MOUSE2.483e-2238.16Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP2_MAIZE3.242e-2238.82Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
CATR_MOUSE3.242e-2238.93Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATK_CHICK4.235e-2239.73Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AD10RM1 EHR Citrus clementina cDNA clone KN0AAN3AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876749 ID=FC876749; Name=FC876749; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
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