FC876749

Overview
NameFC876749
Unique NameFC876749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.235e-22
Identity = 57/152 (37.50%), Postives = 86/152 (56.58%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG----CGTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI+ N+GI  E  YPY    G C+    K  A + N  ++  NDE A+++AVA+  PVS   E +  DF  YK G+++         + +HAV  VG+G  ++G+ YW++KNSWG  WG  GY  I R     + +CG+A   SYP+
Sbjct:  185 SQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVT-EDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLIERG----KNMCGLAACASYPI 330          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.531e-22
Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNR-GCG-TQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F YI  N GI TEA YPY+   G+C      VAA  S   ++    E  L QAV  + P+S+ I+ +   FQ Y  G++    C  +   HAV  VG+G+ E G  +WL+KNSW   WG+AGY+++ R+       CGIAT  SYP+
Sbjct:  180 FDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGS-EGGQDFWLVKNSWATSWGDAGYIKMSRN---RNNNCGIATVASYPL 322          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.531e-22
Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNRGCGTQC-----SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            +   K+I +N G+  E+DYPYK V GTC+  +VK  A ++    V    E  L   +A   PV++ ++ S P FQ YK G       T+C     +H V  VG+G+  +G KYW+I+NSWG  WG+AGY  + RD      +CGI    +YP
Sbjct:  159 SNSLKFIQENNGLGLESDYPYKAVAGTCK--KVKNVATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSD--TKCRSRMMNHCVTAVGYGSNSNG-KYWIIRNSWGTSWGDAGYFLLARD---SNNMCGIGRDSNYP 302          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.223e-22
Identity = 56/148 (37.84%), Postives = 83/148 (56.08%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQ-PVSICIEGSGPDFQSYKGGIFNRG-CGTQCSHAVAIVGFGAT---EDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y++ N G+  EA YPY+  +G C       +AKI+ F  V P  E  L+ AVA + P++  +      F+ Y+ G+++   C +  +HAV +VG+G      DG  YWLIKNSWG++WG  GYM+I +D       C IA+   YP
Sbjct:  198 FQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKD---RNNHCAIASLAQYP 341          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG------------------ATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            F+YII N GI TE+ YPYK   G CE       A +S+++ V    E +L  AV + PVS+ I+ S   FQ Y  GI +   C ++   H V  VG+G                  +     +YW++KNSWG  WG  GY+ + R+ D     CGIA+  S+PV
Sbjct:  183 FEYIINNNGIDTESSYPYKAENGKCEYKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRD---NNCGIASSASFPV 343          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22
Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG--ATE-DGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+  N G+ +E  YPY+  + +C+       A  + F D+ P  E+AL++AVA + P+S+ I+     F  YK GI F   C ++   H V +VG+G  +TE D  KYWL+KNSWGE+WG  GY+++ +D       CGIA+  SYP
Sbjct:  187 FQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDI-PKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKD---RRNHCGIASAASYP 331          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N GI TE  YPYK V G C       A ++ +  ++  N E  L  AV + +PVS+  +     F+ YK G++    CGT     +HAV  VG+G  E+G+ YWLIKNSWG  WG+ GY +    ++  + +C IAT  SYPV
Sbjct:  214 SQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVID-GFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFK----MEMGKNMCAIATCASYPV 359          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.609e-21
Identity = 59/146 (40.41%), Postives = 86/146 (58.90%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCG-TQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F YI  N GI TE+ YPY+    +C      + A  +   +V+ + E+AL +AV+ + P+S+ I+ S   FQ Y  G++  + C  T   H V  VG+G TE    YWL+KNSWG  WG+AGY+++ R+ D     CGIA++PSYP
Sbjct:  179 FDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQ-HTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYG-TESTKDYWLVKNSWGSSWGDAGYIKMSRNRD---NNCGIASEPSYP 319          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21
Identity = 58/150 (38.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            + YI++N GIA E+DYPY     TC  + VK  AKI ++  V  N+E  L  A++   V + I+ S   FQ YK G +     TQC       +H V  VG+G   DG + W+++NSWG  WGE GY+ ++ + +     CG+AT P YP
Sbjct:  170 YNYIMEN-GIAKESDYPYTGSDSTCR-SDVKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYT---DTQCKNNYFALNHEVCAVGYGVV-DGKECWIVRNSWGTGWGEKGYINMVIEGNT----CGVATDPLYP 309          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+ KN+GI +E  YPY   + +C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + R+       CGIA   S+P
Sbjct:  186 FQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 327          
The following BLAST results are available for this feature:
BLAST of FC876749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATH_RAT4.235e-2237.50Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CYSP2_HOMAM5.531e-2240.14Digestive cysteine proteinase 2 OS=Homarus america... [more]
ACP1_ENTHI5.531e-2238.16Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATQ_RAT7.223e-2237.84Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CYSP5_DICDI9.434e-2235.98Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CATL1_HUMAN9.434e-2239.60Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
ALEU_HORVU9.434e-2239.47Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP3_HOMAM1.609e-2140.41Digestive cysteine proteinase 3 OS=Homarus america... [more]
CPP1_ENTHI2.745e-2138.67Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
CATK_MACMU2.745e-2139.04Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3AD10RM1 EHR Citrus clementina cDNA clone KN0AAN3AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876749 ID=FC876749; Name=FC876749; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
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