FC876749

Overview
NameFC876749
Unique NameFC876749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length655
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.115e-21
Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+ KN+GI +E  YPY     +C       AAK   + ++   +E+AL +AVA + P+S+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + R+       CGIA   S+P
Sbjct:  187 FQYVQKNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGI-QKGNKHWIIKNSWGENWGNKGYILMARN---KNNACGIANLASFP 328          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 7.986e-21
Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGTQ---CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY  V G C      V  K+ +  ++    E  L  AV + +PVS+  +     F+ YK G++    CGT     +HAV  VG+G  E+G+ YWLIKNSWG  WG+ GY +    ++  + +CGIAT  SYP+
Sbjct:  215 SQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVIN-GFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGV-ENGVPYWLIKNSWGADWGDNGYFK----MEMGKNMCGIATCASYPI 360          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 56/146 (38.36%), Postives = 84/146 (57.53%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+ +N+GI +E  YPY     +C       AAK   + ++   +E+AL +AVA + PVS+ I+ S   FQ Y  G++ +  C +   +HAV  VG+G  + G K+W+IKNSWGE WG  GY+ + R+       CGIA   S+P
Sbjct:  186 FQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYGI-QKGNKHWIIKNSWGESWGNKGYILMARN---KNNACGIANLASFP 327          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.779e-20
Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIF-NRGCGTQ-CSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+ +N GI +E  YPY     +C       AAK   + ++   +E+AL +AVA + P+S+ I+ S   FQ Y  G++ +  C     +HAV +VG+G T+ G K+W+IKNSWGE WG  GY  + R+       CGI    S+P
Sbjct:  186 FQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYG-TQKGSKHWIIKNSWGESWGNKGYALLARN---KNNACGITNMASFP 327          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.324e-20
Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 2
Query:    8 RGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNR-GCGT-QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            R   Y+  N G+ TE+ YPY+    TC      + A  + +  +    E AL  A   + P+S+ I+ S   FQSY  G++    C + Q  HAV  VG+G+ E G  +WL+KNSW   WGE+GY+++ R+       CGIAT   YP
Sbjct:  177 RAIMYVRDNGGVDTESSYPYEARDNTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGS-EGGQDFWLVKNSWATSWGESGYIKMARN---RNNNCGIATDACYP 320          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.324e-20
Identity = 55/152 (36.18%), Postives = 91/152 (59.87%), Query Frame = 2
Query:    2 SARGFKYIIKNQGIATEADYPYKEVQGTCE-DAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGIFNRGC--GTQCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            +  GF+Y+ K+ G+ ++ADYPY   +  C+ + + +   +++ ++ V  + E +L +AV  + P+S  + G     +SY GGIF+     G    H V +VG+G  E+G KYW+IKN+WG  WGE+GY+R++RD D     CG+    SYP+
Sbjct:  179 AVNGFEYV-KDNGLESDADYPYSGKEDKCKANDKSRSVVELTGYKKVTAS-ETSLKEAVGTIGPISAVVFGK--PMKSYGGGIFDDSSCLGDNLHHGVNVVGYGI-ENGQKYWIIKNTWGADWGESGYIRLIRDTDHS---CGVEKMASYPI 322          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.035e-20
Identity = 58/150 (38.67%), Postives = 88/150 (58.67%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPY--KEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVA-MQPVSICIEGSGPDFQSYKGGI-FNRGCGTQ-CSHAVAIVGFG--ATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            F+Y+  N G+ +E  YPY  ++ + TC       AA  + F D+ P  E+AL++AVA + P+S+ I+     FQ YK GI F+  C ++   H V +VG+G   T+   K+W++KNSWG +WG  GY+++ +D       CGIAT  SYP
Sbjct:  187 FRYVKDNGGLDSEESYPYLGRDTE-TCNYKPECSAANDTGFVDL-PQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKD---QNNHCGIATAASYP 331          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 3.964e-20
Identity = 56/155 (36.13%), Postives = 88/155 (56.77%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI+ N+GI  E  YPY+   G C+    K    + +  ++   DE+A+++AVA+  PVS   E +  DF  Y+ GI++    T C       +HAV  VG+G  ++G+ YW++KNSWG +WG  GY  I R     + +CG+A   SYP+
Sbjct:  187 SQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVT-QDFMMYRTGIYS---STSCHKTPDKVNHAVLAVGYG-EKNGIPYWIVKNSWGPQWGMNGYFLIERG----KNMCGLAACASYPI 332          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 56/152 (36.84%), Postives = 85/152 (55.92%), Query Frame = 2
Query:    5 ARGFKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAM-QPVSICIEGSGPDFQSYKGGIFNRG-CGT---QCSHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYPV 445
            ++ F+YI  N G+ TE  YPY    G C+ +   +  ++ +  ++    E  L  AV + +PVS+  E    +F+ YK G+F    CG      +HAV  VG+G  ED + YWLIKNSWG +WG+ GY +    ++  + +CG+AT  SYPV
Sbjct:  211 SQAFEYIKYNGGLDTEEAYPYTGKDGGCKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVH-EFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGV-EDDVPYWLIKNSWGGEWGDNGYFK----MEMGKNMCGVATCSSYPV 356          
BLAST of FC876749 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 55/150 (36.67%), Postives = 83/150 (55.33%), Query Frame = 2
Query:   14 FKYIIKNQGIATEADYPYKEVQGTCEDAQVKVAAKISNFEDVKPNDEQALLQAVAMQPVSICIEGSGPDFQSYKGGIFNRGCGTQC-------SHAVAIVGFGATEDGMKYWLIKNSWGEKWGEAGYMRILRDVDAPEGLCGIATKPSYP 442
            + YII++ G+A E+DYPY     TC+   VK  AKI+ +  V  N+E  L  A++   V + I+ S   FQ YK G +     T+C       +H V  VG+G   DG + W+++NSWG  WG+ GY+ ++ + +     CG+AT P YP
Sbjct:  170 YDYIIEH-GVAKESDYPYTGSDSTCK-TNVKSFAKITGYTKVPRNNEAELKAALSQGLVDVSIDASSAKFQLYKSGAYT---DTKCKNNYFALNHEVCAVGYGVV-DGKECWIVRNSWGTGWGDKGYINMVIEGNT----CGVATDPLYP 309          
The following BLAST results are available for this feature:
BLAST of FC876749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATK_CANFA6.115e-2138.36Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
ORYC_ORYSJ7.986e-2138.16Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CATK_RABIT1.043e-2038.36Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_MOUSE1.779e-2037.67Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CYSP1_HOMAM2.324e-2036.49Digestive cysteine proteinase 1 OS=Homarus america... [more]
CATLL_PHACE2.324e-2036.18Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATL1_CANFA3.035e-2038.67Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATH_HUMAN3.964e-2036.13Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
ALEUL_ARATH8.830e-2036.84Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CPP2_ENTHI1.153e-1936.67Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAN3AD10RM1 EHR Citrus clementina cDNA clone KN0AAN3AD10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876749 ID=FC876749; Name=FC876749; organism=Citrus clementina; type=EST; length=655bp
TTCGGCACGAGGCTTTAAATATATTATAAAAAACCAGGGTATTGCCACAG
AAGCGGATTATCCATACAAGGAAGTCCAAGGAACTTGTGAAGACGCACAG
GTCAAGGTAGCTGCTAAAATTAGTAACTTTGAAGATGTAAAACCCAATGA
TGAGCAGGCTTTACTCCAAGCTGTAGCCATGCAGCCAGTATCAATTTGCA
TTGAAGGAAGTGGACCAGACTTCCAGAGCTACAAAGGCGGTATTTTTAAC
CGAGGATGTGGAACTCAGTGTTCTCATGCTGTTGCTATCGTTGGATTTGG
GGCAACTGAAGATGGAATGAAGTATTGGTTAATTAAGAATTCATGGGGGG
AGAAATGGGGTGAGGCCGGCTACATGAGGATTCTCAGAGATGTTGATGCA
CCTGAAGGTCTTTGTGGCATTGCCACTAAACCTTCCTACCCAGTTGCATG
AGTAGCAGTATTTTATATTATATTATTATTAGCCGCCTCTTAATAATGAT
GTCTTCAAGCCTACACATGCATTAGCCTCGAAAGGCTTATACGAACCGTA
TGAATCGTATGATTCTTTGGTTTTATCTATGTTGAGTATTTCATAAGTTG
TAATTGAACGCCAATATTTGGTATTAGTTAATGTTAAATCTCTCATTTAA
GTAAA
back to top