FC876805

Overview
NameFC876805
Unique NameFC876805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: FYN_XIPHE (Proto-oncogene tyrosine-protein kinase Fyn OS=Xiphophorus helleri GN=fyn PE=2 SV=3)

HSP 1 Score: 132.494 bits (332), Expect = 1.924e-30
Identity = 78/208 (37.50%), Postives = 114/208 (54.81%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPF 612
            + F +E  ++  L+H  +V+      +  ++ IVTEY   GS+  FL   + RA+ L   V  A  VA GMAY+  + +IHRDL+S N+L+  +   KIADFG+AR+ ++    T   G     +W APE   +  +T K DV+SFGI+L EL+T G +P+  M         V +G R   P DC   L E+M +CW  +PE RP F
Sbjct:  309 ESFLEEAQIMKKLRHDKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDNLVCKIADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPASLHELMLQCWKKDPEERPTF 513          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 132.109 bits (331), Expect = 2.513e-30
Identity = 69/210 (32.86%), Postives = 116/210 (55.24%), Query Frame = 1
Query:    4 QFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEI 621
            +F  E  ++  L H N+VR +G C     + I+TE+   G++ ++L R     +P  + V+ A  +A GM+Y+    FIHRDL + N L+S    +KIADFG+AR  ++ +  T   G     +W APE +    ++ K DV++FG++LWE+ T G+ P+  +  +   + ++  G R   P  C P +  +M +CW+ +P  RP F +I
Sbjct:  351 EFLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPIILVQMASQIASGMSYLEARHFIHRDLAARNCLVSEHNIVKIADFGLARF-MKEDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGV-ELSNVYGLLENGFRMDGPQGCPPSVYRLMLQCWNWSPSDRPRFRDI 558          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: LIMK1_CHICK (LIM domain kinase 1 OS=Gallus gallus GN=LIMK1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 83/226 (36.73%), Postives = 118/226 (52.21%), Query Frame = 1
Query:    7 FQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPE----------------TGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVHAAFAVVNKG-VRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRML 633
            F +EV ++  L+H N+++FIG   K      +TEY KGG++R  L +  +   P    V  A D+A GMAY+H +  IHRDL S N L+  +KS+ +ADFG+AR+ V  E   PE                 G   WMAPEMI  R Y +KVD++SFGIVL E+I  +    +       F +  +G +    P  C P    I   C D +PE RP F+++ + L
Sbjct:  388 FLKEVKVMRCLEHPNVLKFIGVLYKEKRLNFITEYIKGGTLRG-LIKSMDSHYPWSQRVSFAKDIAAGMAYLHSMNIIHRDLNSHNCLVRENKSVVVADFGLARLMVD-EKNQPEHLQNLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDIFSFGIVLCEIIGRVSADPDYLPRTTDFGLNVRGFLERYCPPACPPSFFPIAACCCDLDPEKRPSFSKLEQWL 611          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: FYN_RAT (Proto-oncogene tyrosine-protein kinase Fyn OS=Rattus norvegicus GN=Fyn PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPF 612
            + F +E  ++  LKH  +V+      +  ++ IVTEY   GS+  FL   + RA+ L   V  A  VA GMAY+  + +IHRDL+S N+L+      KIADFG+AR+ ++    T   G     +W APE   +  +T K DV+SFGI+L EL+T G +P+  M         V +G R   P DC   L E+M  CW  +PE RP F
Sbjct:  309 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 513          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: FYN_PIG (Proto-oncogene tyrosine-protein kinase Fyn OS=Sus scrofa GN=FYN PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPF 612
            + F +E  ++  LKH  +V+      +  ++ IVTEY   GS+  FL   + RA+ L   V  A  VA GMAY+  + +IHRDL+S N+L+      KIADFG+AR+ ++    T   G     +W APE   +  +T K DV+SFGI+L EL+T G +P+  M         V +G R   P DC   L E+M  CW  +PE RP F
Sbjct:  309 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 513          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: FYN_MOUSE (Proto-oncogene tyrosine-protein kinase Fyn OS=Mus musculus GN=Fyn PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPF 612
            + F +E  ++  LKH  +V+      +  ++ IVTEY   GS+  FL   + RA+ L   V  A  VA GMAY+  + +IHRDL+S N+L+      KIADFG+AR+ ++    T   G     +W APE   +  +T K DV+SFGI+L EL+T G +P+  M         V +G R   P DC   L E+M  CW  +PE RP F
Sbjct:  309 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 513          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: FYN_HUMAN (Proto-oncogene tyrosine-protein kinase Fyn OS=Homo sapiens GN=FYN PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPF 612
            + F +E  ++  LKH  +V+      +  ++ IVTEY   GS+  FL   + RA+ L   V  A  VA GMAY+  + +IHRDL+S N+L+      KIADFG+AR+ ++    T   G     +W APE   +  +T K DV+SFGI+L EL+T G +P+  M         V +G R   P DC   L E+M  CW  +PE RP F
Sbjct:  309 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 513          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: FYN_BOVIN (Proto-oncogene tyrosine-protein kinase Fyn OS=Bos taurus GN=FYN PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.282e-30
Identity = 79/208 (37.98%), Postives = 112/208 (53.85%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLGFIHRDLKSDNLLISADKSIKIADFGVARIEVQTEGMTPETGT---YRWMAPEMIQHRPYTQKVDVYSFGIVLWELIT-GLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPF 612
            + F +E  ++  LKH  +V+      +  ++ IVTEY   GS+  FL   + RA+ L   V  A  VA GMAY+  + +IHRDL+S N+L+      KIADFG+AR+ ++    T   G     +W APE   +  +T K DV+SFGI+L EL+T G +P+  M         V +G R   P DC   L E+M  CW  +PE RP F
Sbjct:  309 ESFLEEAQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-REVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTF 513          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: M3K7_DROME (Mitogen-activated protein kinase kinase kinase 7 OS=Drosophila melanogaster GN=Tak1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 73/215 (33.95%), Postives = 119/215 (55.35%), Query Frame = 1
Query:    1 QQFQQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG---FIHRDLKSDNLLIS-ADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVHAAFAVVNKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRML 633
            +  ++EV  L+ +KH NI+   G    +    ++ E+A+GGS+  FL  +   A  L  A+  A   A G+AY+H +     IHRD+K  NLL++   +++KI DFG   +  ++  MT   G+  WMAPE+ +   YT+K D++S+ IVLWE+++   PF+ +   +     + KG RP +   C   + ++MT CW T PE RP    IV ++
Sbjct:   55 KDIEKEVKQLSRVKHPNIIALHGISSYQQATYLIMEFAEGGSLHNFLHGKVKPAYSLAHAMSWARQCAEGLAYLHAMTPKPLIHRDVKPLNLLLTNKGRNLKICDFGT--VADKSTMMTNNRGSAAWMAPEVFEGSKYTEKCDIFSWAIVLWEVLSRKQPFKGIDNAYTIQWKIYKGERPPLLTTCPKRIEDLMTACWKTVPEDRPSMQYIVGVM 267          
BLAST of FC876805 vs. ExPASy Swiss-Prot
Match: M3K7L_DROME (Putative mitogen-activated protein kinase kinase kinase 7-like OS=Drosophila melanogaster GN=Takl1 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 75/217 (34.56%), Postives = 120/217 (55.30%), Query Frame = 1
Query:   10 QQEVMMLATLKHLNIVRFIGACRKRMVWCIVTEYAKGGSVRQFLTRRQNRAVPLKLAVKQALDVARGMAYVHGLG--FIHRDLKSDNLLI-SADKSIKIADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDVYSFGIVLWELITGLLPFQNMTAVHAAFAVV------NKGVRPVIPNDCLPVLSEIMTRCWDTNPEVRPPFTEIVRML 633
            ++E+  L+ + H N++R IG         ++ EY + GS+  +L         ++ AV+ AL  A+ +AY+H L    +HRD+K  N+L+ +  + +KI DFG+A     +   T   GT R+MAPE I+H  YT K DVYSFGI+LWEL+T  LP+ ++   ++ +A++       K     + +DC   + ++M  C D NPE RP   EI + L
Sbjct:   52 EREITHLSEIDHENVIRVIGRASNGKKDYLLMEYLEEGSLHNYLYGDDKWEYTVEQAVRWALQCAKALAYLHSLDRPIVHRDIKPQNMLLYNQHEDLKICDFGLATD--MSNNKTDMQGTLRYMAPEAIKHLKYTAKCDVYSFGIMLWELMTRQLPYSHLENPNSQYAIMKAISSGEKLPMEAVRSDCPEGIKQLMECCMDINPEKRPSMKEIEKFL 266          
The following BLAST results are available for this feature:
BLAST of FC876805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FYN_XIPHE1.924e-3037.50Proto-oncogene tyrosine-protein kinase Fyn OS=Xiph... [more]
ABL1_CAEEL2.513e-3032.86Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
LIMK1_CHICK3.282e-3036.73LIM domain kinase 1 OS=Gallus gallus GN=LIMK1 PE=1... [more]
FYN_RAT3.282e-3037.98Proto-oncogene tyrosine-protein kinase Fyn OS=Ratt... [more]
FYN_PIG3.282e-3037.98Proto-oncogene tyrosine-protein kinase Fyn OS=Sus ... [more]
FYN_MOUSE3.282e-3037.98Proto-oncogene tyrosine-protein kinase Fyn OS=Mus ... [more]
FYN_HUMAN3.282e-3037.98Proto-oncogene tyrosine-protein kinase Fyn OS=Homo... [more]
FYN_BOVIN3.282e-3037.98Proto-oncogene tyrosine-protein kinase Fyn OS=Bos ... [more]
M3K7_DROME4.287e-3033.95Mitogen-activated protein kinase kinase kinase 7 O... [more]
M3K7L_DROME4.287e-3034.56Putative mitogen-activated protein kinase kinase k... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CA05RM1 EHR Citrus clementina cDNA clone KN0AAN1CA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876805 ID=FC876805; Name=FC876805; organism=Citrus clementina; type=EST; length=663bp
CAGCAATTTCAGCAGGAAGTCATGATGCTTGCTACATTGAAGCATCTAAA
CATTGTGCGGTTCATAGGAGCATGTCGGAAAAGGATGGTTTGGTGCATTG
TGACGGAGTATGCAAAAGGAGGGTCAGTTAGGCAGTTTCTGACAAGGAGG
CAGAATAGGGCTGTGCCGCTAAAATTGGCGGTTAAGCAGGCACTGGATGT
GGCAAGGGGGATGGCATATGTGCATGGTCTTGGGTTTATCCACAGGGATC
TAAAGTCAGATAACCTTCTAATCTCTGCAGATAAATCTATCAAAATTGCT
GATTTTGGTGTAGCAAGAATTGAAGTGCAGACGGAGGGGATGACCCCAGA
GACAGGGACGTATCGTTGGATGGCTCCAGAGATGATTCAACATAGGCCTT
ACACACAAAAAGTGGATGTCTATAGCTTTGGGATTGTCCTTTGGGAGCTA
ATAACAGGTTTGCTTCCGTTCCAAAACATGACAGCAGTGCATGCAGCATT
TGCTGTGGTGAATAAAGGTGTAAGGCCAGTGATCCCAAATGACTGTCTCC
CTGTGCTTAGCGAGATCATGACTCGCTGCTGGGACACCAACCCGGAAGTT
CGTCCACCCTTCACTGAGATCGTGAGAATGCTATAGAATGCTGAAACTGA
GATCATGACAACT
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