FC876815

Overview
NameFC876815
Unique NameFC876815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length666
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: MPAC2_CARBE (Major pollen allergen Car b 1 isoform 2 OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.128e-30
Identity = 71/159 (44.65%), Postives = 98/159 (61.64%), Query Frame = -2
Query:  162 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 632
            MGVF    E TS +P  +LFK F+L  + L+PKV PQ V +VE + G+GGPG+IKK  F EG   KY K RV+ +D  N  YNYT IEG+  GD     ++ VS+E K+V  P GGS   +  KF+ K   E+  E++KG  E  + + +A+E+Y LA+
Sbjct:    1 MGVFNYEAETTSVIPAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNGGPGTIKKITFSEGSPVKYVKERVEEIDHTNFKYNYTVIEGDVLGD----KLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEEMKGAKEMAEKLLRAVESYLLAH 155          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: MPAC1_CORAV (Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16 OS=Corylus avellana PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 4.287e-30
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = -2
Query:  162 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGE--GDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALAN 632
            MGVF   VE  S +P  +LFK +VL  D L+PKV PQ + +VE + G+GGPG+IK   F EG  +KY K RVD +D  N  Y+YT IEG+  GD     ++ V +E K+V  P GGS   +  KF+ K   EI  E++KG  E  + + +A+E Y LA+
Sbjct:    1 MGVFNYEVETPSVIPAARLFKSYVLDGDKLIPKVAPQAITSVENVEGNGGPGTIKNITFGEGSRYKYVKERVDEVDNTNFTYSYTVIEGDVLGD----KLEKVCHELKIVAAPGGGSILKISSKFHAKGDHEINAEEMKGAKEMAEKLLRAVETYLLAH 155          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: DRR4_PEA (Disease resistance response protein DRRG49-C OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.629e-29
Identity = 67/159 (42.14%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  156 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 632
            MGVF    E TS + P  L K  V   D L PKV+   +K++E++ G+GGPG+IKK  FVE  + KY  H+V+ +D  N   NY+ + G G  +  T++ +S+E+K+   P+GGS + + +K+Y K  A   EE++K G  K +GIFKALE Y +ANP+
Sbjct:    1 MGVFNFEEEATSIVAPATLHKALVTDADILTPKVI-DAIKSIEIVEGNGGPGTIKKLTFVEDGETKYVLHKVELVDDANWANNYSIVGGVGLPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAIPSEEEIKNGKAKGEGIFKALEGYCVANPD 156          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: PR1_PHAVU (Pathogenesis-related protein 1 OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.844e-28
Identity = 62/158 (39.24%), Postives = 98/158 (62.03%), Query Frame = -2
Query:  159 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANP 632
            MGVFT   + TS + P  L+K      DT+ PK LP   K+VE++ G+GGPG+IKK +FVE  + K+  H+++++D+ N  Y+Y+ + G   A   T + ++++SK+   P+GGS   + I ++ K  A   E+++K G  K   +FKA+EAY LANP
Sbjct:    1 MGVFTFEDQTTSPVAPATLYKAVAKDADTIFPKALPDSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGGV--ALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELKAGKAKSDSLFKAVEAYLLANP 156          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: DRR3_PEA (Disease resistance response protein Pi49 OS=Pisum sativum GN=DRR49A PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.167e-27
Identity = 64/159 (40.25%), Postives = 99/159 (62.26%), Query Frame = -2
Query:  156 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 632
            MGVF +  E TS + P  L+K  V   D L PKV+   +K++E++ G+GG G+IKK  FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E+K+   P+GGS + + +K++ K  A   EEQ+K    K  G+FKALE Y LA+P+
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADNLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDAAPSEEQLKTDKAKGDGLFKALEGYCLAHPD 156          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: DRR1_PEA (Disease resistance response protein Pi176 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.525e-27
Identity = 66/160 (41.25%), Postives = 100/160 (62.50%), Query Frame = -2
Query:  156 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGSKSTVVIKFYPK-PGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 632
            MGVF +  E TS + P  L+K  V   DTL PKV+   +K++E++ G+GG G+IKK  FVE  + K+  H+V+ +D  N  YNY+ + G G  +  T++ +S+E+K+   P+GGS + + +K+Y K   A   EEQ+K    K  G+FKALE Y LA+P+
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADTLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPD--TVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAAAPTEEQLKSDKAKGDGLFKALERYCLAHPD 157          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.686e-26
Identity = 68/160 (42.50%), Postives = 97/160 (60.62%), Query Frame = -2
Query:  156 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDG-GSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 632
            MGV + ++E  S+L   KLFK FVL   TL+ K LP V+K+VE++ GDGG G+IK  +F EG      KH V+ LDK+N  Y Y+ ++GE  A +P +  +SY  K+   P G GS       F+ K G+ I E+++K G E+   + KA+EAY  ANP+
Sbjct:    1 MGVISYDMEIKSSLSAAKLFKAFVLDVGTLINKALPNVIKSVEILQGDGGAGTIKLVHFGEGGPVPSVKHHVEELDKDNMSYKYSIVDGE--ALMPGLQSISYVIKI--EPSGHGSVCKHNTTFHFKAGSNINEDEIKAGKERAAEMIKAVEAYVQANPD 156          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: SAM22_SOYBN (Stress-induced protein SAM22 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.875e-26
Identity = 61/160 (38.12%), Postives = 100/160 (62.50%), Query Frame = -2
Query:  156 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPN 632
            MGVFT   E  S + P  L+K  V   D ++PK L    K+VE + G+GGPG+IKK  F+E  + K+  H+++++D+ N  Y+Y+ +   G A +P T + ++++SK+V  P+GGS   + +K+  K  AE  ++++K G  K   +FKA+EAY LA+P+
Sbjct:    1 MGVFTFEDEINSPVAPATLYKALVTDADNVIPKALDSF-KSVENVEGNGGPGTIKKITFLEDGETKFVLHKIESIDEANLGYSYSVV---GGAALPDTAEKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPNQDELKTGKAKADALFKAIEAYLLAHPD 156          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: PR2_PHAVU (Pathogenesis-related protein 2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26
Identity = 62/159 (38.99%), Postives = 98/159 (61.64%), Query Frame = -2
Query:  159 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIP-TIDHVSYESKVVGTPDGGSKSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANP 632
            M VFT   + TS + P  L+K  V   DT++PK +    K+VE++ G+GGPG+IKK +FVE  + K+  H+++ +D+ N  Y+Y+ +   G A +P T + +S +SK+   P+GGS   + IK++ K  A   E+++K G  K   +FK +EAY LANP
Sbjct:    1 MAVFTFEDQTTSPVAPATLYKALVKDADTIVPKAVDSF-KSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIEEIDEANLGYSYSIV---GGAALPDTAEKISIDSKLSDGPNGGSVVKLSIKYHSKGDAPPNEDELKAGKAKSDALFKVIEAYLLANP 155          
BLAST of FC876815 vs. ExPASy Swiss-Prot
Match: PR2_PETCR (Pathogenesis-related protein 2 OS=Petroselinum crispum GN=PR2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.366e-26
Identity = 69/162 (42.59%), Postives = 99/162 (61.11%), Query Frame = -2
Query:  153 MGVFTLNVEDTSTLPPEKLFKLFVLQFDTLLPKVLPQVVKNVELISGDGGPGSIKKFNFVEGVDWKYFKHRVDALDKENKIYNYTAIEGEGDANIPTIDHVSYESKVVGTPDGGS--KSTVVIKFYPKPGAEIKEEQVKGGLEKEKGIFKALEAYALANPNA 632
            MG  T +VE  S++P + ++K F+L  D ++PKVLPQ +K++E+ISGDGG G+IKK    E   +   K R+D +D E   Y+Y+ I  EGD  +  I+ ++ +  VV T DGG   K+T +  + P   A I EE VK   E+   +FKA+EAY LANP A
Sbjct:    1 MGAVTTDVEVASSVPAQTIYKGFLLDMDNIIPKVLPQAIKSIEIISGDGGAGTIKKVTLGEVSQFTVVKQRIDEIDAEALKYSYSII--EGDLLLGIIESITSKFTVVPT-DGGCIVKNTTI--YTPIGDAVIPEENVKEATEQSGMVFKAIEAYLLANPGA 157          
The following BLAST results are available for this feature:
BLAST of FC876815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
MPAC2_CARBE1.128e-3044.65Major pollen allergen Car b 1 isoform 2 OS=Carpinu... [more]
MPAC1_CORAV4.287e-3044.03Major pollen allergen Cor a 1 isoforms 5, 6, 11 an... [more]
DRR4_PEA1.629e-2942.14Disease resistance response protein DRRG49-C OS=Pi... [more]
PR1_PHAVU6.844e-2839.24Pathogenesis-related protein 1 OS=Phaseolus vulgar... [more]
DRR3_PEA1.167e-2740.25Disease resistance response protein Pi49 OS=Pisum ... [more]
DRR1_PEA1.525e-2741.25Disease resistance response protein Pi176 OS=Pisum... [more]
IPRT1_CATRO1.686e-2642.50Probable intracellular pathogenesis-related protei... [more]
SAM22_SOYBN2.875e-2638.13Stress-induced protein SAM22 OS=Glycine max PE=1 S... [more]
PR2_PHAVU6.405e-2638.99Pathogenesis-related protein 2 OS=Phaseolus vulgar... [more]
PR2_PETCR8.366e-2642.59Pathogenesis-related protein 2 OS=Petroselinum cri... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CC01RM1 EHR Citrus clementina cDNA clone KN0AAN1CC01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876815 ID=FC876815; Name=FC876815; organism=Citrus clementina; type=EST; length=666bp
TTTTTTTTTTTATTTACCCAAAAGCCAATTATATAAATTGGCATATTTGA
AAACAAAAAGACACGACATACGGAAGCCATAAACATGATTATTCATAATG
TTGCAACAAAGGCGACCCAAGTGCGGTGAAGTGTTGACGTAAAAGCTTAT
ACGGCATTGGGGTTTGCCAAGGCATAGGCTTCCAGAGCCTTAAAAATTCC
CTTCTCCTTTTCCAAGCCTCCCTTAACCTGCTCTTCCTTAATCTCGGCAC
CTGGTTTGGGATAGAACTTGATAACAACGGTGCTCTTGCTTCCTCCGTCA
GGGGTGCCCACAACCTTACTCTCATAAGAAACATGATCAATAGTAGGGAT
GTTAGCATCACCCTCACCTTCAATTGCCGTGTAATTGTATATCTTGTTCT
CTTTGTCCAATGCATCAACCCTATGCTTAAAGTACTTCCAATCAACACCT
TCAACAAAGTTAAACTTCTTGATGCTTCCAGGGCCTCCATCCCCTGAAAT
CAATTCAACGTTCTTTACAACCTGAGGCAGGACTTTGGGCAGAAGGGTGT
CGAACTGAAGGACAAAAAGTTTGAACAACTTTTCAGGGGGGAGAGTGCTT
GTATCCTCTACATTCAACGTGAAAACACCCATGATTGTCTAAAAGTTAAA
CAAAGAAAGAAGATGA
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