FC876819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: BLH11_ARATH (BEL1-like homeodomain protein 11 OS=Arabidopsis thaliana GN=BLH11 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 3.562e-30 Identity = 64/144 (44.44%), Postives = 93/144 (64.58%), Query Frame = 2 Query: 11 SALASKAMSRHFKCLRDGIVGQIQATKKAMGEKDPVAPGTSIGETPRLKIIDQALRQQRAFQQMSMMES---HPWRPQRGLPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV*EMYLEQ 433 + LA +AM+RHF L + I+ Q+ + ++ P +L + D + Q++ +++ H W+P RGLPE SV++LRAWLF+HFLHPYP++ +K +LA QTGLS++QVSNWFINA VRLW PM+ EMY E+ Sbjct: 130 TGLALQAMTRHFGSLEEAIISQLNSVRRRFIISHQDVPKIISSGLSQLSLFDGNTTSS-SLQRLGLVQGPQRHAWKPIRGLPETSVAILRAWLFQHFLHPYPNEAEKLVLASQTGLSKNQVSNWFINARVRLWKPMIEEMYREE 272
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: BLH8_ARATH (BEL1-like homeodomain protein 8 OS=Arabidopsis thaliana GN=BLH8 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.768e-29 Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 2 Query: 14 ALASKAMSRHFKCLRDGIVGQIQATKKAMGEKDPVAPGTSIGETPRLKIIDQALRQQRAFQQMSM----MESHPWRPQRGLPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV*EMYLEQTKEQDNNMASSYCATDLDDNSGRPDRTQNPPADQKPT 544 +LA K SR FK LR I ++ ++ +S G ++ ++QR+ ++ + H WRPQRGLPER+V+VLRAWLF HFLHPYP+D DK +LA QTGLSR+QVSNWFINA VRLW PMV E++ +TK N S + S RP+ +P +Q T Sbjct: 366 SLALKRTSRSFKALRTAIAEHVKQ----------ISSHSSNGNNN-----NRFQKRQRSLIGNNVGFESQQQHIWRPQRGLPERAVAVLRAWLFDHFLHPYPTDSDKQMLATQTGLSRNQVSNWFINARVRLWKPMVEEIHTLETKAIKNADTSHNI-----EPSNRPNTVSSPSHEQTLT 526
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: ATH1_ARATH (Homeobox protein ATH1 OS=Arabidopsis thaliana GN=ATH1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.334e-28 Identity = 57/92 (61.96%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 179 QQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV*EMYLEQTKEQDNN 454 Q QQ+ WRPQRGLPE+SVSVLR W+F++FLHPYP D +KH+LA ++GL+RSQVSNWFINA VRLW PM+ EMY E K + NN Sbjct: 358 QHCLLQQLKRKNHQIWRPQRGLPEKSVSVLRNWMFQNFLHPYPKDSEKHLLAIRSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKLNN 449
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: PKNX2_MOUSE (Homeobox protein PKNOX2 OS=Mus musculus GN=Pknox2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 113 PVAPGTSIGETPRLKIIDQALRQQRAFQQMSMM-----ESHPWRPQRG-LPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV 412 PV TS G+ I A++ Q + + E + +RG LP+ + +++R+WLF+H +HPYP++ +K +A QT L+ QV+NWFINA R+ PM+ Sbjct: 246 PVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPML 351
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: PKNX2_HUMAN (Homeobox protein PKNOX2 OS=Homo sapiens GN=PKNOX2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.273e-11 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 113 PVAPGTSIGETPRLKIIDQALRQQRAFQQMSMM-----ESHPWRPQRG-LPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV 412 PV TS G+ I A++ Q + + E + +RG LP+ + +++R+WLF+H +HPYP++ +K +A QT L+ QV+NWFINA R+ PM+ Sbjct: 246 PVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPML 351
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: PKNX2_PONAB (Homeobox protein PKNOX2 OS=Pongo abelii GN=PKNOX2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 37/106 (34.91%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 113 PVAPGTSIGETPRLKIIDQALRQQRAFQQMSMM-----ESHPWRPQRG-LPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV 412 PV TS G+ I A++ Q + + E + +RG LP+ + +++R+WLF+H +HPYP++ +K +A QT L+ QV+NWF+NA R+ PM+ Sbjct: 246 PVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFVNARRRILQPML 351
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: PKNX1_MOUSE (Homeobox protein PKNOX1 OS=Mus musculus GN=Pknox1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 46/149 (30.87%), Postives = 72/149 (48.32%), Query Frame = 2 Query: 143 TPRLKIIDQAL-----RQQRAFQQMSM--------MESHPWRPQRG-LPERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV*EMYLEQTKEQDNNMASSYCATDLDDNSGRPDRTQNPPADQKPTQ 547 TP+ +++ QAL R Q + Q+ + E + +RG LP+ + +V+R+WLF+H HPYP++ +K +A QT L+ QV+NWFINA R+ PM LD + +T+ PA +P Q Sbjct: 219 TPQGQVVTQALSPGTIRIQNSQLQLQLNQDLSTLHQEDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRILQPM------------------------LDSSCSETPKTKKKPAQNRPVQ 343
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: HTH_DROME (Homeobox protein homothorax OS=Drosophila melanogaster GN=hth PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 233 QRGL-PERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV 412 +RG+ P+ + ++LRAWLF+H HPYPS+ K LA+ TGL+ QV+NWFINA R+ PM+ Sbjct: 368 KRGIFPKVATNILRAWLFQHLTHPYPSEDQKKQLAQDTGLTILQVNNWFINARRRIVQPMI 428
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: MEIS2_MOUSE (Homeobox protein Meis2 OS=Mus musculus GN=Meis2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 233 QRGL-PERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV 412 +RG+ P+ + +++RAWLF+H HPYPS+ K LA+ TGL+ QV+NWFINA R+ PM+ Sbjct: 279 KRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMI 339
BLAST of FC876819 vs. ExPASy Swiss-Prot
Match: MEIS2_HUMAN (Homeobox protein Meis2 OS=Homo sapiens GN=MEIS2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 233 QRGL-PERSVSVLRAWLFKHFLHPYPSDVDKHILARQTGLSRSQVSNWFINAIVRLWNPMV 412 +RG+ P+ + +++RAWLF+H HPYPS+ K LA+ TGL+ QV+NWFINA R+ PM+ Sbjct: 279 KRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMI 339 The following BLAST results are available for this feature:
BLAST of FC876819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876819 ID=FC876819; Name=FC876819; organism=Citrus clementina; type=EST; length=603bpback to top |