FC876820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_THENV (3-isopropylmalate dehydratase large subunit OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=leuC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.097e-26 Identity = 73/201 (36.32%), Postives = 107/201 (53.23%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 E T YL+ + + Y+P S E ++ Y ++ +LEPLVA P+S DN ARE + V++D+V+IGSCT G+ DF AA+V + K +PA+ V+ L + +AGC TCG CLGG + V V+T+NRNF G +GH + +YLA+P TAA +AL + DP+ +L Sbjct: 228 EVTADYLQRERGVSYKPP-SLEPGRYVDRYEVELQRLEPLVAAPYSVDNVKAAREVEGVEVDQVFIGSCTNGRLSDFEVAARVLKRG--RAKARCIAIPASYAVFRRAMELGY--------IDVLTKAGC-VVTYGTCGPCLGG---HFGVAGPGEVVVTTSNRNFKGRVGHPDSKVYLANPATAAAAALEGKIVDPRPYL 413
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_ARCB4 (3-isopropylmalate dehydratase large subunit OS=Arcobacter butzleri (strain RM4018) GN=leuC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.097e-26 Identity = 69/182 (37.91%), Postives = 101/182 (55.49%), Query Frame = 2 Query: 59 YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPK 598 YSDE A++ D++KLEP++A P+ P N ++++ D +K+D+V+IGSCT G+ DF AA++ V L P TQK+ + L +AG ++PTCGACLGG + + VC+STTNRNF G MG + IYLA+ AA SA++ Y+ DP+ Sbjct: 255 YSDEDANYCQVIEIDVAKLEPVIAYPYLPSNGHSVSQAVSDNIKVDQVFIGSCTNGRLSDFKIAAEILAGQKVARHVRLILTPGTQKILREATKLGY--------IDTLVDAGA-VVSNPTCGACLGGYMGI---LGDNEVCISTTNRNFVGRMGSRSSKIYLANSAVAAASAISGYITDPR 424
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_SULSY (3-isopropylmalate dehydratase large subunit OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=leuC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.432e-26 Identity = 71/199 (35.68%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T ++ +T+ ++ SD A + EY FD SK+EP+VA P P N E ID+V+IGSCT G+ D AA + + +V ++PA+ +++ + +I +AGC S TCG CLGG A E VC+ST+NRNF G MGH + +YL+SP AA SA+ + P E Sbjct: 232 EKTVDWVRKRTNREFKLYKSDPDAKYCCEYEFDASKIEPVVACPSLPSNVKPVSEVAGTHIDQVFIGSCTNGRLSDLRIAAAILKSKKVHPEVRCIVIPASDQIYKQAL--------HEGIIEILADAGCLISTS-TCGPCLGGHMGILA---EGEVCLSTSNRNFVGRMGHPKSQVYLSSPAVAAASAVLGRIAHPDE 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CAMFF (3-isopropylmalate dehydratase large subunit OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=leuC PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.432e-26 Identity = 81/204 (39.71%), Postives = 111/204 (54.41%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC--KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPK 598 + T ++LE K +L +P YSDE A++ R D+SKL+P++A P P N E D+KID+V+IGSCT G+ D AA++ GK+V T L+ PATQK+ + + IF EAG ++PTCGACLGG CVSTTNRNF G MG + +YLA+ AA SA+ + DP+ Sbjct: 231 DITKEFLESK-NLRSKPKFHYSDEGANYEQVLRIDVSKLDPVIAYPFLPSNGKSINEALKDDLKIDQVFIGSCTNGRLSDLRIAARIL--KGKRVAKHTRLIITPATQKIALAAQK--------EGLMDIFVEAGA-VVSNPTCGACLGGYMGILGAGER---CVSTTNRNFVGRMGDRTSEVYLANSAVAAASAIAGKIADPR 419
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_PYRIL (3-isopropylmalate dehydratase large subunit OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=leuC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.871e-26 Identity = 73/199 (36.68%), Postives = 107/199 (53.77%), Query Frame = 2 Query: 11 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 T YL+ + + Y+P + ++ +Y ++SKLEPLVA P+S DN RE + V++D+V+IGSCT G+ DF AA++ +VK +PA+ ++ L I +AGC TCG CLGG + V VST+NRNF G MGH + +YLA+P TAA +AL + DP+ +L Sbjct: 230 TVDYLQRERGVSYKPP-DLQPGRYVDKYVVELSKLEPLVAAPYSVDNVKAVREVEGVEVDQVFIGSCTNGRLSDFEIAARILRRG--RVKSRCIAIPASYTIFRKALELGY--------IDILTKAGC-VVTYGTCGPCLGG---HFGVAGPGEVVVSTSNRNFKGRMGHPDSKVYLANPATAAAAALEGKIVDPRPYL 413
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_NITSB (3-isopropylmalate dehydratase large subunit OS=Nitratiruptor sp. (strain SB155-2) GN=leuC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.871e-26 Identity = 82/205 (40.00%), Postives = 111/205 (54.15%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECK-DVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLV--PATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +L DK L EP YSDE A + D++ LEP++A PH P N R ++ K D+K+D+V+IGSCT G+ D AA++ G+KV T ++ PATQK+ + + I +AG ++PTCGACLGG A CVSTTNRNF G MG + IYLA+ AA SA+ + DP+E Sbjct: 231 EVTKAFLADKP-LAREPKIHYSDEDAEYEQVIEIDVNNLEPVIAFPHLPSNGRPISEAAKMDLKVDQVFIGSCTNGRLSDIAIAAEIL--KGRKVARHTRMIVTPATQKILKEAEK--------RGYIDILIDAGA-VVSNPTCGACLGGYMGILADNER---CVSTTNRNFVGRMGARTSEIYLANSAVAAASAVAGKIADPRE 420
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_METS5 (3-isopropylmalate dehydratase large subunit OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=leuC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.443e-26 Identity = 73/197 (37.06%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 11 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 T Y++ E V D A +L E+ ++ KLEPLVA P+S DN ARE V +D+VYIGSCT G+ DF A+++ GKKVK +P++ ++ + + AGC TCG CLGG + V VST++RNF G MG E +YL+ P AA SA T Y+ DP++ Sbjct: 231 TKDYIKTMRGKEVELVTPDPGAKYLDEHTIELDKLEPLVAAPYSVDNVKTAREESKVPVDQVYIGSCTNGRLSDFRIASEIL--KGKKVKTRCIAIPSSYTMFKQAMEMGY--------IEDLVNAGC-VVTYGTCGPCLGG---HFGVAGPGEVIVSTSSRNFRGRMGSNEAKVYLSGPSVAAASAATGYITDPRD 413
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_SULSO (3-isopropylmalate dehydratase large subunit OS=Sulfolobus solfataricus GN=leuC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.191e-26 Identity = 71/198 (35.86%), Postives = 102/198 (51.52%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPK 598 + T +Y+++ E V D A ++ EY + ++EPLVA PHS DN + E + +D+VYIGSCT G+ DF AAK+ GKKVK +PA+ +++ + + Q +AGC TCG CLGG + VST++RNF G MG E +YL+ P AA SAL + DP+ Sbjct: 231 QETKRYIKEMRGYEPELVTPDNGAKYVDEYTIQLDEMEPLVAAPHSVDNVKVVNELEGTPVDQVYIGSCTNGRLSDFEIAAKIM--KGKKVKSRCIAIPASYRMFKEALE--------RGYIQTLVDAGCIVTYG-TCGPCLGG---HFGIAGPGENIVSTSSRNFKGRMGSNEAKVYLSGPAVAAISALEGKITDPR 414
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CLOD6 (3-isopropylmalate dehydratase large subunit OS=Clostridium difficile (strain 630) GN=leuC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.191e-26 Identity = 75/185 (40.54%), Postives = 99/185 (53.51%), Query Frame = 2 Query: 62 SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALAREC-KDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 +DE A + Y D++KL+ VA PH P+N E KD+KID+V IGSCT G+ D A++ GKKV V + P TQKV+++ K F EAG ++PTCG CLGG A + +STTNRNF G MGH + +YLASP AA SA+T + P E + Sbjct: 255 ADEDAVYDEVYEIDLAKLKETVAFPHLPENTRTVDEIDKDIKIDQVVIGSCTNGRISDLEVVAEIM--KGKKVADGVRVMIFPGTQKVYLEAIE--------KGYITTFIEAGAAV-STPTCGPCLGGHMGILAAGEKS---ISTTNRNFVGRMGHVDSEVYLASPAVAAASAITGKISKPSEII 425
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_ELUMP (3-isopropylmalate dehydratase large subunit OS=Elusimicrobium minutum (strain Pei191) GN=leuC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.442e-26 Identity = 67/187 (35.83%), Postives = 102/187 (54.55%), Query Frame = 2 Query: 47 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 ++ + +DE A + + D S LEP V+ PH+ DN E KD+K+++V+IG+CT G+ ED AA++ TF+ PA++ V + + +IF +AG +P CG C+G + + VC++T NRNF G MG+ +G IYL+SP AA SAL Y+ DP+E L Sbjct: 243 FKLISADEGADYEKVIKIDASSLEPTVSCPHTVDNTKTVGELKDIKVNQVFIGTCTNGRIEDLRIAAEILKDKKVNPGTRTFITPASRDVMLAALK--------EGLIEIFVKAGASV-QTPGCGPCVGVHGGI---LGDGEVCLATQNRNFQGRMGNTKGFIYLSSPAVAAYSALKGYISDPREIL 417 The following BLAST results are available for this feature:
BLAST of FC876820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876820 ID=FC876820; Name=FC876820; organism=Citrus clementina; type=EST; length=607bpback to top |