FC876820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_DESVH (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=leuC PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23 Identity = 70/180 (38.89%), Postives = 92/180 (51.11%), Query Frame = 2 Query: 62 SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDP 595 +D A + E FD++ + P+VA PH PDN E KDV + +V IGSCT G+ D AA V G+KV V ++PAT +W + + F EAGC TCG CLGG A + ++TTNRNF G MG E +YL+ P TAA SA+T + DP Sbjct: 251 ADAGAVYERELSFDVTGMTPVVACPHLPDNVKPVSEVKDVTVQQVVIGSCTNGRIGDLREAAAVL--RGRKVSRDVRCIVLPATPGIWRQALR--------EGLIETFMEAGC-IVGPATCGPCLGGHMGILA---DGERAIATTNRNFKGRMGSLESEVYLSGPATAAASAVTGVITDP 416
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_SULDN (3-isopropylmalate dehydratase large subunit OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuC PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.936e-23 Identity = 72/202 (35.64%), Postives = 105/202 (51.98%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPK 598 E T +L DK +L EP YSD AS++ D++ L+P++A P P N ++ + KD +KID+ +IGSCT G+ D AA++ V + P TQ + + L I +AG ++PTCGACLGG + + V +STTNRNF G MG + +YLA+ AA SA+ Y+ DP+ Sbjct: 231 ETTKAFLADK-NLAREPRIHYSDADASYVQILNIDVASLDPVIAYPFLPSNGHSVVQAQKDNIKIDQAFIGSCTNGRLSDLKVAAEILKGKRVHPDVRLIVTPGTQMILREANKLGY--------IDIIVDAG-GVVSNPTCGACLGGYMGI---LGDNEVAISTTNRNFVGRMGSRSSKVYLANSAVAAISAIKGYITDPR 419
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_NAUPA (3-isopropylmalate dehydratase large subunit OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=leuC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.528e-23 Identity = 74/205 (36.10%), Postives = 111/205 (54.15%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPV--YSDEKASFLSEYRFDISKLEPLVAKPHSPDN-RALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 EA + ++ L EP YSD A++ D++KLEPLVA P P N + +++ KD ++ID+VYIGSCT G D AA++ GK+V +V + PATQ+++ + + I +AG A+PTCGACLGG + + V+TTNRNF G MG + +YL++ AA SA+ + DP++ Sbjct: 234 EAFLEEVKKYNPLRSEPKIHYSDPDANYSQVIEIDVNKLEPLVAYPFLPSNGKPISQAVKDDIEIDQVYIGSCTNGTLSDLRIAAEIL--KGKRVHRRVRLIVTPATQRIYKQ--------AEHEGILDILIDAGA-VVANPTCGACLGG---YMGILGDGERAVATTNRNFRGRMGSRSSEVYLSNSAVAAASAIAGKIADPRD 424
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC1_THEMA (3-isopropylmalate dehydratase large subunit 1 OS=Thermotoga maritima GN=leuC1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.302e-23 Identity = 68/189 (35.98%), Postives = 99/189 (52.38%), Query Frame = 2 Query: 47 YEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDN--RALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 + + +D A + +E D + LEPLV+ PH DN + E + +KID+V+IG+CT G+ +D A K+ GK V + PA++KV+MD K + F E G P CG C+G + + +ST NRNF G MG+ IYLASP TAA +A+T Y+ DP+ F+ Sbjct: 242 FRELKADPDAVYETEIEIDATTLEPLVSLPHYVDNVRKVSEVEKEKIKIDQVFIGTCTNGRLQDLEIALKILEKHGKHPDVRLIVGPASRKVYMDALE--------KGIIKKFVELGAAV-IPPGCGPCVGIHMGV---LGDGERVLSTQNRNFKGRMGNPNAEIYLASPATAAATAVTGYITDPRRFI 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_HELHP (3-isopropylmalate dehydratase large subunit OS=Helicobacter hepaticus GN=leuC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.312e-23 Identity = 63/199 (31.66%), Postives = 98/199 (49.25%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 + T Y + +T + +D A + + D+ + VA PH P+N + ++KID+V IGSCT G+ D AA++ ++PATQ ++++ + + F +AG ++PTCG CLGG A + CVSTTNRNF G MGH +YL+SP AA SA+ + P++ Sbjct: 232 DITISYAKGRTKRDFRIYKADVDAEYEQVFDIDLDSINHTVAFPHLPENTKEKDDWGEIKIDQVVIGSCTNGRLSDMAVAAEILKDKTIAKNTRCIIIPATQNIYLECI--------NRGYLETFIKAGA-VVSTPTCGPCLGGHMGILAANEK---CVSTTNRNFVGRMGHITSEVYLSSPEVAAASAVRGILSAPQD 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_METB6 (3-isopropylmalate dehydratase large subunit OS=Methanoregula boonei (strain 6A8) GN=leuC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23 Identity = 64/199 (32.16%), Postives = 105/199 (52.76%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 + T++Y++ + + + SD+ A F + ++++ LEP VA PH+ D + + ID+V+IGSCT G+ ED + AA+V KV ++PA++ ++ + + F AG A P CG C+GG ++ + V ++T+NRNF G G EG +YL SP TAA SA+ + DP+E Sbjct: 229 KVTWEYMKGRRKITPFALASDDDAKFAEKRTYNVADLEPQVAVPHNVDQGIPVGKVEGTHIDQVFIGSCTNGRYEDLVEAAEVLGKKKFDPKVRVLVIPASRDEYLKALEAGL--------VERFVRAGALVEA-PCCGPCMGG---SFGLIAAGEVSLATSNRNFRGRQGSTEGKVYLCSPATAAASAIKGEITDPRE 415
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_DESAA (3-isopropylmalate dehydratase large subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=leuC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.356e-23 Identity = 68/193 (35.23%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 50 EPVY--SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPAS-------PTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 +PV+ SD A + +D++ LEP VA PH P+N + +V I +V IGSCT G+ ED +AA++ + V ++PAT +++ Q EE DT S PTCG CLGG A V+TTNRNF G MGH E +YLA+P AA SA+ + P + Sbjct: 245 KPVFYASDPDAKYAKVIEYDVTDLEPQVAFPHLPENTRPISQVGEVPIHQVIIGSCTNGRIEDMRSAARILTGNKADKNVRLIIIPATPQIY----------------RQAMEEGLFDTFLSAGAVISPPTCGPCLGGHMGILAAGER---AVATTNRNFVGRMGHVESEVYLANPAVAAASAIAGKIAGPDD 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_PICTO (3-isopropylmalate dehydratase large subunit OS=Picrophilus torridus GN=leuC PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.255e-22 Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T Y+ +KT+ Y+ DE A + D S++EP VA P+SPDN + + +ID+ YIGSCT G+ ED AA + V +VPA+Q+V+ + I +AG A TCGACLGG + C+STTNRNF G MG + +YLA+P A SA+ + P+E Sbjct: 227 EKTLDYIRNKTN-DYKIYKDDENAEYSRIIDIDASEIEPSVAIPNSPDNVRPVSKVSE-RIDQAYIGSCTNGRIEDIRRAALILKDKKIDKNVRLMVVPASQEVYNQALK--------EGLVDIITDAG-GYFAGTTCGACLGGYMGV---LGPGETCISTTNRNFIGRMGDRTSRVYLANPEVVAASAIMGRIASPEE 411
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC1_ARCFU (3-isopropylmalate dehydratase large subunit 1 OS=Archaeoglobus fulgidus GN=leuC1 PE=3 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 2.795e-22 Identity = 69/201 (34.33%), Postives = 101/201 (50.25%), Query Frame = 2 Query: 29 DKTSLPY----------EPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 DKT+L Y E + SDE A F E D++ +EP VA PH DN E + ++D+V+IGSCT G+ ED AA++ V ++PA+ + + + +IF +AG A P CG C+GG ++ + V VST+NRNF G G EG IYL +P AA +A+ + DP++ Sbjct: 229 DKTTLEYLKAMGRPYEGELLKSDEDAEF-QEVELDVTGMEPQVAAPHRVDNVVGISEVEGTRVDQVFIGSCTNGRYEDLKIAAEILKGEKVASNVRLIVIPASHREYRRALK--------EGLIEIFVDAGALVEA-PCCGPCMGG---SFGLIASGEVSVSTSNRNFIGRQGSPEGKIYLVNPAVAAATAIYGEITDPRK 416
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC2_METAC (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina acetivorans GN=leuC2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.133e-22 Identity = 68/201 (33.83%), Postives = 103/201 (51.24%), Query Frame = 2 Query: 5 EATFKYLEDKT-SLPYEPVY-SDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T YL+++ +P + SDE+A +L +D+S LEP VA PH+ DN E + K+D+V++GSCT G+ ED A + V +VPA++ +M + + AG A P CG C+GG ++ + V ++T+NRNF G G E +YL+SP TA SALT + DP++ Sbjct: 231 EVTEAYLQERIPGYKLDPYWKSDEEAKYLDIRHYDVSDLEPQVACPHNVDNVKSVSEVEGTKLDQVFMGSCTNGRFEDIKIMADIMGDEPVAKGVRLLVVPASKTEYMKLLKAGY--------VEKLMNAGAIVEA-PCCGPCMGG---SFGLLGPGEVGLATSNRNFKGREGSAESFVYLSSPATAGASALTGEITDPRK 419 The following BLAST results are available for this feature:
BLAST of FC876820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876820 ID=FC876820; Name=FC876820; organism=Citrus clementina; type=EST; length=607bpback to top |