FC876826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_CANGA (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Candida glabrata GN=TRM61 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21 Identity = 59/167 (35.33%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMV-----FSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGV---NIFVTVGVRDIQGQGF 624 I+EGDL +++ D +K V + N F R+G+F H D IGKP+GS + + K FV+++ P+PELWTL L HRTQI+Y + S+++ L P V AR+V G +Y+++FH A E+F+ G+ N +T RD+ GF Sbjct: 12 IQEGDLALIWISRDNIKPVTINANETFNTRYGSFPHKDMIGKPYGSQIAIRTKVAKKFAFVHVMQPSPELWTLSLPHRTQIVYTPDSSYIMQRLNCSPNSRVIEAGTGSGSFSHAFARSV---GQLYSYEFHPVRYEQATEEFKEHGLLDKNTIIT--HRDVCKDGF 173
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_SCHPO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Schizosaccharomyces pombe GN=cpd1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.357e-20 Identity = 57/168 (33.93%), Postives = 87/168 (51.79%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVFSN-KGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFER------TGVNIFVTVGVRDIQGQGFPD 630 ++ GDL + + + + + + F N++GAF HS+ IGK +G + S K GF+YLL PTPELWTL L HRTQI+Y +I+ + L++ G V +R V P G ++TF++H +A ++F G N +T RD+ GF D Sbjct: 10 VENGDLAVAWIGRNKLIPLHIEAEKTFHNQYGAFPHSEMIGKRYGEQIASTAKQGFIYLLQPTPELWTLALPHRTQIVYTPDIALIHQKLRITYGTRVIEAGTGSASMSHAISRTVGPLGRLFTFEYHATRYQTALQEFREHEMLIDVGGNTHLT--HRDVCKDGFLD 175
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_ASHGO (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Ashbya gossypii GN=TRM61 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.357e-20 Identity = 57/166 (34.34%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSPFQNRFGAFKHSDWIGKPFGSMVF-----SNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGV--NIFVTVGVRDIQGQGF 624 I EGDLV+V+ +K +++ F R+G+F H D +G+P+GS + SN+ GF+++L PTPELWTL L HRTQI+Y + S+++ L P V AR V G +++++FH A +F+ G+ + VT+ RD+ +GF Sbjct: 11 IAEGDLVLVWISRGNVKQLRIKSGEVFNTRYGSFAHDDIVGRPYGSQIGVRTKGSNRFGFIHVLQPTPELWTLSLPHRTQIVYTPDSSYIMQRLGCSPQSRVIEAGTGSGSFSHAFARTV---GQLFSYEFHHMRYEQALAEFQEHGLIADGNVTITHRDVCQKGF 173
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_YARLI (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Yarrowia lipolytica GN=TRM61 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.558e-19 Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 148 IKEGDLVIVYERHDCMKAVKVCQNSP-FQNRFGAFKHS--DWIGKPFGSMVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAVTPTGHVYTFDFHDQTAASAREDFERTGV-NIFVTVGVRDIQGQGFPDE 633 I++GDLV+ + +K + V + F R+GAF H D G GSM +K GF++L+ PTPELWTL L HRTQI+Y + S+++ L++ PG V +R+ G VY+++FH++ A+++FER + N+ T RD+ GF E Sbjct: 9 IEDGDLVLGWMTRTAIKPIVVEKKEGLFNTRYGAFPHRNMDKYGAQLGSM---SKQGFIHLIHPTPELWTLSLPHRTQIVYTTDSSYIVQRLKIRPGSTVIESGTGSGSFTHAISRSAGLAGKVYSYEFHEERYNLAKQEFERHQLTNVIPT--HRDVCNDGFDIE 169
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_ASPFU (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus fumigatus GN=trm61 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.503e-11 Identity = 53/185 (28.65%), Postives = 73/185 (39.46%), Query Frame = 1 Query: 235 RFGAFKHSDWIGKPFGSMVF----------------------------SNK--------------GGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAV-------------TPTGHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 RFG+F HS I +P+GS + SNK GF++LL PTPELWT L HRTQ++Y + S+++ L + PG + RAV G V +F+FH Q A RE+ G++ V V RD+ GF Sbjct: 51 RFGSFPHSTLIDQPWGSQIVASVVDTGSRGRKNQSSKKRKADDLDTPTSNKDEAQSSPGTPRAAASGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLCVRPGSTIIEAGAGSGSFTHASVRAVFNGYPSEAPAAKKRRLGKVCSFEFHAQRAQRIREEIHDHGLDALVEVTHRDVYEDGF 235
BLAST of FC876826 vs. ExPASy Swiss-Prot
Match: TRM61_ASPOR (tRNA (adenine-N(1)-)-methyltransferase catalytic subunit trm61 OS=Aspergillus oryzae GN=trm61 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11 Identity = 51/181 (28.18%), Postives = 73/181 (40.33%), Query Frame = 1 Query: 235 RFGAFKHSDWIGKPFGSMVFSNK--------------------------------------GGFVYLLAPTPELWTLVLSHRTQILYIANISFVIMYLQLVPGCLVXXXXXXXXXXXXXXARAV--------TPT-----GHVYTFDFHDQTAASAREDFERTGVNIFVTVGVRDIQGQGF 624 RFG+F H +P+GS + ++K GF++LL PTPELWT L HRTQ++Y + S+++ L+ PG V RAV PT G V +F+FH Q A R + + G++ V V RD+ GF Sbjct: 51 RFGSFPHITLCDQPWGSQIIASKVDTGSRGRTQKMKRKADELDSSTQAEDKPSPQTPVAASSGFLHLLYPTPELWTASLPHRTQVVYTPDYSYILHRLRARPGSTVIEAGAGSGSFTHASVRAVFNGYPSDDQPTKKRRLGKVCSFEFHAQRAEKVRVEVNQHGLDGLVEVTHRDVYEDGF 231 The following BLAST results are available for this feature:
BLAST of FC876826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876826 ID=FC876826; Name=FC876826; organism=Citrus clementina; type=EST; length=657bpback to top |