FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 45/96 (46.88%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ GEV AVG GK K + VK G +V+YSKYAGTE++ G +++++ E D++ I+ Sbjct: 9 STVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_THEEB (10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.120e-21 Identity = 45/96 (46.88%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 + +KPL DR+F+KVAE+EE TAGG+LL + ++EKP +G V AVGPG L E+G R+P+ + G+ V+YSKYAG + K + G +Y+ +++A++ Sbjct: 8 VSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLA-GEDYVLLSEKDILAIV 102 HSP 2 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 45/94 (47.87%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ GEV AVG GK K + VK G +V+YSKYAGTE++ G +++++ E D++ I+ Sbjct: 9 STVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMDVKVGDKVLYSKYAGTEVKLAGEDYVLLSEKDILAIV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPLGDRV++K +EEKT GI +P A+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LI++E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 83.9593 bits (206), Expect = 8.793e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K DG Y+ K ++++AV+ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPLGDRV++K +EEKT GI +P A+ KPQ GEVVAVG GK ++ + VK G +VIYSKYAGTE++++G +LI++E D++ ++ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93 HSP 2 Score: 83.9593 bits (206), Expect = 8.793e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++KPL DRV IK EE T G+++ + +KEKP G V+AVGPG + E+G R L + G+ V+YSKYAG + K DG Y+ K ++++AV+ Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21 Identity = 47/94 (50.00%), Postives = 70/94 (74.47%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++KPL DRVLVK EEKT GG+++P A+ KP GEV+AVG GKT K + ++VK G V+++KYAGTE++ +G +HL++REDD++ I++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95 HSP 2 Score: 89.3521 bits (220), Expect = 2.093e-17 Identity = 41/94 (43.62%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G VIAVGPG ++G +++ G+ V+++KYAG + K DG +++ + +++A++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVK-LDGVDHLVMREDDILAII 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21 Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +KPLGDRV+VK+ EE T GG+ LP A+ KPQ GEVVAVG G+ + +++ VK G +VI+SKYAGTE++ +G +L++RE D++ I+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94 HSP 2 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 41/93 (44.09%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV +KV ++EE T GG++L +KEKP G V+AVGPG +G R + G+ V++SKYAG + K DG Y+ + S+++A++ Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQY-IDGKRVEPEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 46/97 (47.42%), Postives = 70/97 (72.16%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 + +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ +++AV+S Sbjct: 8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103 HSP 2 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 47/98 (47.96%), Postives = 70/98 (71.43%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVLS 685 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103 HSP 2 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 46/97 (47.42%), Postives = 70/97 (72.16%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 + LKPL DRVF+KV+E+EE TAGG+LL +++KEKP IG V+AVG G +++G+R + + G+ V+YSKYAG D K S G +Y+ +++A ++ Sbjct: 8 VSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLS-GDDYVLLSEKDILATVA 103 HSP 2 Score: 95.5153 bits (236), Expect = 2.920e-19 Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 373 +++KPLGDRV VK+ EEKT GGI LP +A+ KPQ GEVVAVGEGK ++ + VK G +V+YSKYAGT+++ +G +++++ E D++ Sbjct: 9 STLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLSGDDYVLLSEKDIL 99
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MICAN (10 kDa chaperonin OS=Microcystis aeruginosa (strain NIES-843) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 45/97 (46.39%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 + +KPL DRVF+KV+ +EE TAGG+ L +A+KEKP IG V+AVGPG +++G+R P+ + G+ V+YSKYAG D K G ++ +++A +S Sbjct: 8 VTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIK-LGGEEFVLLSEKDILAAVS 103 HSP 2 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 373 T++KPLGDRV VK+ EEKT GGIFLP AA+ KPQ GEVVAVG GK ++ + V G +V+YSKYAGT+++ G +++ E D++ Sbjct: 9 TTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIKLGGEEFVLLSEKDIL 99 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |