FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLONN (10 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 IKPLGDRV++K EEKT GI LP +A+ KPQ E+VAVG G V ++ + VK G +V++SKY+GTE++ +G + I+R++D++ I+E Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVRMEVKVGDKVLFSKYSGTEVKLDGEEYTILRQNDILAIVE 94 HSP 2 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 37/93 (39.78%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV IK EAEE T G++L ++KEKP ++AVGPG L +G + + G+ V++SKY+G + K DG Y + ++++A++ Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVRMEVKVGDKVLFSKYSGTEVK-LDGEEYTILRQNDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 IKPLGDRV++K EEKT GI LP +A+ KPQ E+VAVG G V ++++ VK G +V++S+YAG E++ +G ++I+R++D++ I+E Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAIVE 94 HSP 2 Score: 77.411 bits (189), Expect = 8.230e-14 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV IK EAEE T G++L ++KEKP ++AVGPG L +G + + G+ V++S+YAGN+ K DG YI + ++++A++ Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVNMEVKVGDRVLFSQYAGNEVK-IDGEEYIILRQNDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PROA2 (10 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 44/94 (46.81%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++KPL DRV+VK EEKT GG+++P + KPQ GE+VAVG GK + L++ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEIVAVGTGKVAENGQVLEMQVNIGQKVLYGKYSGTEVTVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +LKPL DRV +K A AEE T GGL + + KEKP G ++AVG G + E G + + G V+Y KY+G + +G +Y+ + S++ A+L Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEIVAVGTGKVAENGQVLEMQVNIGQKVLYGKYSGTEVT-VEGEDYLIMRESDIFAIL 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_NOCFA (10 kDa chaperonin OS=Nocardia farcinica GN=groS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL + G+TV+YSKY G + K G Y+ A +V+AV+ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVQEGDTVIYSKYGGTEIK-YQGEEYLILSARDVLAVV 98 HSP 2 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V+ G VIYSKY GTE+++ G +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVQEGDTVIYSKYGGTEIKYQGEEYLILSARDVLAVV 98
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_BACSU (10 kDa chaperonin OS=Bacillus subtilis GN=groS PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +KPLGDRV++++ EEKT GI LP +A+ KPQ G++VA G G+ + ++ + VK G ++I+SKYAGTE+++ G +LI+RE D++ ++ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAVI 93 HSP 2 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 40/93 (43.01%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV I++ E+EE TA G++L +++KEKP G ++A G G + E G R L + G+ +++SKYAG + K +GT Y+ + S+++AV+ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVK-YEGTEYLILRESDILAVI 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_BACA2 (10 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18 Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +KPLGDRV++++ EEKT GI LP +A+ KPQ G++VA G G+ + ++ + VK G ++I+SKYAGTE+++ G +LI+RE D++ ++ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVKYEGTEYLILRESDILAVI 93 HSP 2 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 40/93 (43.01%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV I++ E+EE TA G++L +++KEKP G ++A G G + E G R L + G+ +++SKYAG + K +GT Y+ + S+++AV+ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKIVAAGSGRVLESGERVALEVKEGDRIIFSKYAGTEVK-YEGTEYLILRESDILAVI 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PROVI (10 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 ++KPL DRV+VK EEKT GG+++P + KP GEVVAVG GK + L++ VK G +V+Y KY+GTE+ G ++LI+RE D+ IL Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEVSVEGEDYLIMRESDIFAIL 94 HSP 2 Score: 80.4925 bits (197), Expect = 9.722e-15 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +LKPL DRV +K A AEE T GGL + + KEKP G V+AVG G + + G + + G+ V+Y KY+G + +G +Y+ + S++ A+L Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPMYGEVVAVGAGKMSDSGQLLEMPVKAGDKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_LISW6 (10 kDa chaperonin OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 42/92 (45.65%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAV 679 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + E G ++PL +A G+TV+++KY+G + +GT+Y+ + S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92 HSP 2 Score: 90.5077 bits (223), Expect = 9.395e-18 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV-GKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 379 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLENGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_GEOLS (10 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++PL DR++VK EEKT GG+F+P A+ KPQ GEV+AVG GK + K + VK G +++ KYAGTE++ +G L++REDDV+ ++E Sbjct: 3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVKVDGDEFLMMREDDVLAVIE 95 HSP 2 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 40/93 (43.01%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 L+PL+DR+ +K E EE TAGGL + + +KEKP G VIAVG G ++EG PL + G+++++ KYAG + K DG ++ + +V+AV+ Sbjct: 3 LRPLHDRIIVKRLEGEEKTAGGLFIPDTAKEKPQKGEVIAVGNGKKNDEGKCAPLDVKVGDSILFGKYAGTEVK-VDGDEFLMMREDDVLAVI 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_ENTFA (10 kDa chaperonin OS=Enterococcus faecalis GN=groS PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18 Identity = 44/93 (47.31%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTV-GKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +KPLGDRV++++ EEKT GGI L S A+ KPQ GEV+AVGEG+ + K+ + VK G V++ KY+GTE+++ G +LIV D++ +E Sbjct: 2 LKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKIGDTVMFEKYSGTEVKYEGVEYLIVSAKDIIATVE 94 HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV I+VA+ EE T GG++L +KEKP G VIAVG G + E G + P+ + G+TVM+ KY+G + K +G Y+ A +++A + Sbjct: 2 LKPLGDRVVIRVAKEEEKTVGGIVLASVAKEKPQTGEVIAVGEGRVLENGTKVPMEVKIGDTVMFEKYSGTEVK-YEGVEYLIVSAKDIIATV 93 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |