FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +KPLGDRV++++ EEKT GGI LP A+ KPQ G+VVAVG G+ + K +D+ VK VIYSKYAGTE++ +G +LIVRE D++ I+ Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRESDILAIV 93 HSP 2 Score: 88.5817 bits (218), Expect = 3.570e-17 Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV I+V E EE T GG++L + +KEKP G V+AVG G + +EG R L + + V+YSKYAG + K DG Y+ + S+++A++ Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVK-HDGKEYLIVRESDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.549e-20 Identity = 44/94 (46.81%), Postives = 67/94 (71.28%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMA 676 + +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G V+AVGPG +++G+R P+ + G+ V+YSKYAG D K G +Y+ +++A Sbjct: 8 VSTVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIK-LGGEDYVLLSEKDILA 100 HSP 2 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 373 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVVAVG GK ++ I VK G +V+YSKYAGT+++ G +++++ E D++ Sbjct: 9 STVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDIL 99
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.022e-20 Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+E+G+R+ ++ G+ V+YSKYAG D K G Y+ +++AV+S Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103 HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SYNSC (10 kDa chaperonin OS=Synechococcus sp. (strain CC9605) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20 Identity = 46/98 (46.94%), Postives = 70/98 (71.43%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVLS 685 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K GSD Y+ +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103 HSP 2 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK V G V+YSKYAGT+++ ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 + +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 86.2705 bits (212), Expect = 1.772e-16 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94 HSP 2 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 43/95 (45.26%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG + K DG ++ + +++AV++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK-LDGVEHLVMREDDILAVIT 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.641e-20 Identity = 47/93 (50.54%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 ++KPL DRVLVK EEKT GG+++P A+ KP GEVVAVG GK KL ++VK G V+++KYAGTE++ +G HL++REDD++ ++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94 HSP 2 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 43/95 (45.26%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 +LKPLNDRV +K E+EE TAGGL + + +KEKPS G V+AVGPG ++G P+++ G+TV+++KYAG + K DG ++ + +++AV++ Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVK-LDGVEHLVMREDDILAVIT 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 46/98 (46.94%), Postives = 70/98 (71.43%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVLS 685 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +E+G+R+ + G+ V+YSKYAG D K GSD Y+ +++A+++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAIVN 103 HSP 2 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK ++ V G +V+YSKYAGT+++ ++++ E D++ I+ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAIV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +++KPLGDRVLVKI +EKT GGIFLP A+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ ++++ E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVL 682 + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ +++A++ Sbjct: 8 VSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.450e-20 Identity = 49/95 (51.58%), Postives = 69/95 (72.63%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +++KPLGDRVLVKI +EKT GGIFLP A+ KPQ GEVVAVG GK + KL + +K G +V+YSKYAGTE++ ++++ E D++ I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 HSP 2 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 44/100 (44.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 386 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVL 682 T + LKPL DRV +K+A+ +E TAGG+ L + +KEKP +G V+AVGPG ++EG P+ + G+ V+YSKYAG + K GSD Y+ +++A++ Sbjct: 5 TLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSD--EYVLLAERDILAIV 102 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |