FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_DELAS (10 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 38/94 (40.43%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +++PL DRV+VK E KT GI +P A KP GEV+AVG GK K + + ++VK G +V++ KY+G ++ +G L+++EDD+ ++E Sbjct: 2 NLRPLHDRVIVKRLENETKTASGIVIPENAAEKPDQGEVLAVGPGKKNDKGEVIALNVKVGDRVLFGKYSGQTVKVHGDELLVMKEDDLFAVVE 95 HSP 2 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +L+PL+DRV +K E E TA G+++ E + EKP G V+AVGPG +++G L++ G+ V++ KY+G K G + K ++ AV+ Sbjct: 2 NLRPLHDRVIVKRLENETKTASGIVIPENAAEKPDQGEVLAVGPGKKNDKGEVIALNVKVGDRVLFGKYSGQTVK-VHGDELLVMKEDDLFAVV 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_TREPR (10 kDa chaperonin OS=Tremblaya princeps GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 37/95 (38.95%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 + I+PLGDRV+VK E KT GI +P +A K G VVA+G GK + A++ + V+ G +V++ KYAG ++ + + +++RE+D+V ++E Sbjct: 2 SKIRPLGDRVVVKRSEDETKTPCGIVIPDSAAEKQDQGTVVALGPGKKDSEGARVPMEVRLGDRVLFGKYAGQSIKVDDEDLMVMREEDIVAVIE 96 HSP 2 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++PL DRV +K +E E T G+++ +++ EK GTV+A+GPG D EG R P+ + G+ V++ KYAG K D + + + +++AV+ Sbjct: 4 IRPLGDRVVVKRSEDETKTPCGIVIPDSAAEKQDQGTVVALGPGKKDSEGARVPMEVRLGDRVLFGKYAGQSIK-VDDEDLMVMREEDIVAVI 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_THICR (10 kDa chaperonin OS=Thiomicrospira crunogena (strain XCL-2) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 39/95 (41.05%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHL-IVREDDVVGILE 385 +IKPL DRV+V+ ++++ GGI LP +AQ K GEVVAVG GK + ++VK G +V++ +Y+G E++ + L ++REDD++ I+E Sbjct: 2 NIKPLHDRVVVRQVEEQKESTGGILLPGSAQEKENLGEVVAVGPGKAADNGSIIPMTVKVGDKVMFGQYSGQEVKDDAGKPLKVMREDDIIAIVE 96 HSP 2 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 30/94 (31.91%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++KPL+DRV ++ E ++ + GG+LL +++EK ++G V+AVGPG + G+ P+++ G+ VM+ +Y+G + K G + +++A++ Sbjct: 2 NIKPLHDRVVVRQVEEQKESTGGILLPGSAQEKENLGEVVAVGPGKAADNGSIIPMTVKVGDKVMFGQYSGQEVKDDAGKPLKVMREDDIIAIV 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MARMS (10 kDa chaperonin OS=Marinomonas sp. (strain MWYL1) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +I+PL DRV+V+ K E T GI LP +A+ KP GEV+AVG G+ + ++VK G V++ +Y+G ++ G LI++ED++ GI+E Sbjct: 2 NIRPLHDRVVVRRKEEETTTASGIVLPGSAKEKPTQGEVLAVGTGRIQSNGDVQALAVKVGDTVLFGQYSGQTVKIEGDELLIMKEDEIYGIVE 95 HSP 2 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 33/94 (35.11%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +++PL+DRV ++ E E TTA G++L ++KEKP+ G V+AVG G + G+ + L++ G+TV++ +Y+G K +G + K E+ ++ Sbjct: 2 NIRPLHDRVVVRRKEEETTTASGIVLPGSAKEKPTQGEVLAVGTGRIQSNGDVQALAVKVGDTVLFGQYSGQTVK-IEGDELLIMKEDEIYGIV 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MACCJ (10 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKP +RV I+ E E TTA G++LT+++KEK + GTV+AVG G + G R + ++ G+ V+Y + G + K D +YI K +++A++ Sbjct: 2 LKPYGNRVVIQKTERETTTASGIVLTDSAKEKTNEGTVVAVGTGRILNNGERVEIGVSVGDRVVYEPFGGTEVKTGD-ESYIVLKEEDIIAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_WOLTR (10 kDa chaperonin OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 37/94 (39.36%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEG-KTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 S+ L D VL IK + E+ GGI LPS+A+ KP GEV+A+GEG + ++ ++VK G +V Y ++AGTE+E ++++E D++ I++ Sbjct: 5 SLSVLDDSVL--IKPINEEKQGGIVLPSSAEKKPTKGEVIAIGEGSRNSSGERIALTVKAGDKVFYRQWAGTEIEHGSEKLIVMKESDILAIIK 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PSEPF (10 kDa chaperonin OS=Pseudomonas fluorescens (strain Pf0-1) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 35/93 (37.63%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 L+PL+DRV I+ +E E+ TAGG++L ++ EK + G ++AVGPG E G + LS+ G+ V++ Y+G++ DG + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGEILAVGPGKALESGEVRALSVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVI 95 HSP 2 Score: 67.781 bits (164), Expect = 6.521e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 385 ++PL DRV+++ E+KT GGI LP +A K GE++AVG GK + ++ +SVK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEEKKTAGGIVLPGSAAEKANHGEILAVGPGKALESGEVRALSVKVGDKVVFGPYSGSNTVKVDGEDLLVMSENEILAVIE 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_ANASL (10 kDa chaperonin OS=Anabaena sp. (strain L31) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 36/94 (38.30%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDRV VK+ + EK ++ P A+ KPQ GEVVA+G GK ++ ++ VK G ++YSKYAGT+++ ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKV-SASEKRPRRLYFPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDLLLYSKYAGTDVKLGTEEYVLLSEKDILAMV 101 HSP 2 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 36/97 (37.11%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVL 682 + +KPL DRVF+KV+ A E L + +KEKP +G V+A+G G +++G+R+ L + G+ ++YSKYAG D K G++ Y+ +++A++ Sbjct: 8 VSTVKPLGDRVFVKVS-ASEKRPRRLYFPDTAKEKPQVGEVVALGAGKRNDDGSRQELEVKVGDLLLYSKYAGTDVKLGTE--EYVLLSEKDILAMV 101
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PSEPG (10 kDa chaperonin OS=Pseudomonas putida (strain GB-1) GN=groS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 35/93 (37.63%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G V+AVG G + E G + L++ G+ V++ Y+G++ DG + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVI 95 HSP 2 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 34/94 (36.17%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 385 ++PL DRV+++ E KT GGI LP +A KP GEVVAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEVVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVIE 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_PSEPU (10 kDa chaperonin OS=Pseudomonas putida GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 34/93 (36.56%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 L+PL+DRV I+ +E E TAGG++L ++ EKP+ G ++AVG G + E G + L++ G+ V++ Y+G++ DG + + +E++AV+ Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEIVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVI 95 HSP 2 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 33/94 (35.11%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTE-LEFNGANHLIVREDDVVGILE 385 ++PL DRV+++ E KT GGI LP +A KP GE+VAVG G+ + ++ ++VK G +V++ Y+G+ ++ +G + L++ E++++ ++E Sbjct: 3 LRPLHDRVVIRRSEEESKTAGGIVLPGSAAEKPNRGEIVAVGTGRILENGEVRALAVKVGDKVVFGPYSGSNTVKVDGEDLLVMAENEILAVIE 96 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |