FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SHEB2 (10 kDa chaperonin OS=Shewanella baltica (strain OS223) GN=groS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 34/94 (36.17%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +++PL+DRV +K E E T+AGG++LT ++ EK + G ++AVG G + E G KPL + G+ V++++ G + DG + +++MAV+ Sbjct: 2 NIRPLHDRVIVKRLEVESTSAGGIVLTGSAAEKSTRGEILAVGNGRILENGTVKPLDVKVGDVVIFNEGYGVKKEKIDGQEVLILSEADLMAVV 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_HAEPS (10 kDa chaperonin OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=groS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 I+PL D+V++K + +E K+ GGI L +A TK G V+AVG G+T+ L ++VK G VI+++Y E + +G LI+ ED+++ I+E Sbjct: 3 IRPLHDKVILKREEIETKSAGGIVLTGSAATKSTRGTVIAVGNGRTLDNGTVLPLNVKVGDVVIFNEYGVKEEKIDGETVLILSEDNILAIVE 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CHRSD (10 kDa chaperonin OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=groS PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAV 679 ++PL+DRV ++ E E+ TAGG++L ++EKP+ G V+AVG G + E G +PL + G+TV++ G + + DG + S+++AV Sbjct: 3 IRPLHDRVVVRRVEEEQKTAGGIVLPGNAQEKPTRGEVLAVGNGRILESGEVRPLDVKVGDTVIFKDGFGVEKQKIDGEEVLIMSESDILAV 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH101_VIBVY (10 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +++PL+DRV ++ E E +AGG++LT ++ EK + G V+AVG G + E G +PL + G+TV++++ G + DG + +++MA++ Sbjct: 2 NIRPLHDRVIVERQEVESKSAGGIVLTGSAAEKSTRGVVLAVGKGRILENGTVQPLDVKVGDTVIFAESYGTKTEKIDGKEVLIMSENDIMAIV 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH101_VIBVU (10 kDa chaperonin 1 OS=Vibrio vulnificus GN=groS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 32/94 (34.04%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +++PL+DRV ++ E E +AGG++LT ++ EK + G V+AVG G + E G +PL + G+TV++++ G + DG + +++MA++ Sbjct: 2 NIRPLHDRVIVERQEVESKSAGGIVLTGSAAEKSTRGVVLAVGKGRILENGTVQPLDVKVGDTVIFAESYGTKTEKIDGKEVLIMSENDIMAIV 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_THEAB (10 kDa chaperonin OS=Thermosipho africanus (strain TCF52B) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 34/90 (37.78%), Postives = 57/90 (63.33%), Query Frame = 2 Query: 116 PLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 PLG R+L+K E++T+GGI LP A+ KP E+VAVG + D+ + G +VI+SKY+GTE++ +++I+ +D++ +E Sbjct: 5 PLGSRLLIKPIQEEKRTEGGIVLPDTAKEKPMKAEIVAVGNLEDA-----DVDLHVGDKVIFSKYSGTEIKIEEEDYIIIDVEDILAKIE 89
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SHESH (10 kDa chaperonin OS=Shewanella sediminis (strain HAW-EB3) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 +++PL+DRV +K +E E +AGG++LT ++ E+ S G V+AVG G + E G+ +PL + G+ V++++ G + DG + S++MAV+S Sbjct: 2 NIRPLHDRVIVKRSEVESKSAGGIVLTGSAAEQSSRGEVLAVGNGRILENGSVQPLDVKVGDIVIFNEGYGVKKEKIDGEEVLILSESDLMAVVS 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_SHEPA (10 kDa chaperonin OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 35/94 (37.23%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +++PL+DRV +K +E E +AGG++LT ++ E+ S G V+AVG G + E GN PL + G+ V++++ G + DG + S++MAV+ Sbjct: 2 NIRPLHDRVIVKRSEVESKSAGGIVLTGSAAEQSSRGEVLAVGNGRILENGNLMPLDVKVGDIVIFNEGYGVKKEKIDGEEVLILSESDLMAVV 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_NEOSM (10 kDa chaperonin OS=Neorickettsia sennetsu (strain Miyayama) GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 33/92 (35.87%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAV 679 LK L+D+V I+ E E+ AGG+ + +++K+KP++G V+AVG G + G +P+ + G+ V+Y K+AG++ + DG Y+ K ++++A+ Sbjct: 5 LKMLHDQVLIRPHE-EKDGAGGIYIPDSAKKKPTMGLVVAVGAGAKNSNGTFQPVCVKEGDIVLYRKWAGSEVE-HDGVEYVVMKETDIIAI 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_EHRSE (10 kDa chaperonin OS=Ehrlichia sennetsu GN=groS PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 33/92 (35.87%), Postives = 62/92 (67.39%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAV 679 LK L+D+V I+ E E+ AGG+ + +++K+KP++G V+AVG G + G +P+ + G+ V+Y K+AG++ + DG Y+ K ++++A+ Sbjct: 5 LKMLHDQVLIRPHE-EKDGAGGIYIPDSAKKKPTMGLVVAVGAGAKNSNGTFQPVCVKEGDIVLYRKWAGSEVE-HDGVEYVVMKETDIIAI 94 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |