FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_OCEIH (10 kDa chaperonin OS=Oceanobacillus iheyensis GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 43/91 (47.25%), Postives = 66/91 (72.53%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 IKPLGDRV++++ EE T GI LP +A+ KPQ G+VVAVG G+ K+ + V G ++I+SK+AGTE+++ G +LI+RE+D++ I+ Sbjct: 2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRVENGEKIALEVSEGDRIIFSKFAGTEVKYEGTEYLILRENDILAII 92 HSP 2 Score: 82.0333 bits (201), Expect = 3.341e-15 Identity = 38/93 (40.86%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV I++ E EETTA G++L +++KEKP G V+AVG G + E G + L ++ G+ +++SK+AG + K +GT Y+ + ++++A++ Sbjct: 2 IKPLGDRVVIELVEQEETTASGIVLPDSAKEKPQEGKVVAVGSGRV-ENGEKIALEVSEGDRIIFSKFAGTEVK-YEGTEYLILRENDILAII 92
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MICLC (10 kDa chaperonin OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 +KPL DR+ ++ EAE+TTA GL++ + +KEKP G V+AVGPG + E GNR P+ +A G+ V+YSKY G + K G Y+ A +V+AV++ Sbjct: 5 IKPLEDRIVVRPLEAEQTTASGLVIPDTAKEKPQEGQVVAVGPGRVAENGNRVPVDVAEGDVVLYSKYGGTEVK-VGGEEYLVLSARDVLAVVT 97 HSP 2 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 SIKPL DR++V+ E+ T G+ +P A+ KPQ G+VVAVG G+ ++ + V G V+YSKY GTE++ G +L++ DV+ ++ Sbjct: 4 SIKPLEDRIVVRPLEAEQTTASGLVIPDTAKEKPQEGQVVAVGPGRVAENGNRVPVDVAEGDVVLYSKYGGTEVKVGGEEYLVLSARDVLAVV 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 SIKPLGDRV++K EE T GI + A+ +PQ EVVAVG G V + ++ VK G +V+YSKYAGTE++F G + I+R+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K +G Y + +++A++ Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 SIKPLGDRV++K EE T GI + A+ +PQ EVVAVG G V + ++ VK G +V+YSKYAGTE++F G + I+R+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 78.9518 bits (193), Expect = 2.829e-14 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K +G Y + +++A++ Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-VDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CALS8 (10 kDa chaperonin OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 I+P+GDR+L+K K EE T GI LP + KPQ EV+ VG G V K+++ VK G +VI SKYAGTE++ +G + I+R+DDV+ I+E Sbjct: 3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94 HSP 2 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++P+ DR+ IK E EE T G++L + KEKP I VI VGPG + +G + + + G+ V+ SKYAG + K DG Y + +V+A++ Sbjct: 3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGI-VDGEKVEMVVKKGDKVIVSKYAGTEIK-IDGEEYTIIRQDDVLAII 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_ARTAT (10 kDa chaperonin OS=Arthrobacter aurescens (strain TC1) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 41/93 (44.09%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DR+ ++ EAE+TTA GL++ ++++EKP G V+A+GPG D+ GNR P+ +A G+ V+YSKY G + K + G Y+ A +V+A++ Sbjct: 5 IKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAIGPGRFDDNGNRVPVDVAVGDVVIYSKYGGTEVK-TGGNEYLVLSARDVLAIV 96 HSP 2 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 SIKPL DR++V+ E+ T G+ +P +AQ KPQ GEVVA+G G+ ++ + V G VIYSKY GTE++ G +L++ DV+ I+ Sbjct: 4 SIKPLEDRIVVRPLEAEQTTASGLVIPDSAQEKPQEGEVVAIGPGRFDDNGNRVPVDVAVGDVVIYSKYGGTEVKTGGNEYLVLSARDVLAIV 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_ANATD (10 kDa chaperonin OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=groS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19 Identity = 45/92 (48.91%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 I+P+GDR+L+K K EE T GI LP + KPQ EV+ VG G V K+++ VK G +VI SKYAGTE++ +G + I+R+DDV+ I+E Sbjct: 3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGIVDGEKVEMVVKKGDKVIVSKYAGTEIKIDGEEYTIIRQDDVLAIIE 94 HSP 2 Score: 72.4034 bits (176), Expect = 2.648e-12 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++P+ DR+ IK E EE T G++L + KEKP I VI VGPG + +G + + + G+ V+ SKYAG + K DG Y + +V+A++ Sbjct: 3 IRPIGDRILIKFKEREEVTKSGIVLPDTVKEKPQIAEVIEVGPGGI-VDGEKVEMVVKKGDKVIVSKYAGTEIK-IDGEEYTIIRQDDVLAII 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +KPLGDRV++K +T EEKT GGI L S + KP G+V+AVGEG+T+ KL +VK G +V++ KYAG E+E+NG L+V D+V I+E Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94 HSP 2 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV +K EE T GG++L KEKP+ G VIAVG G E G + ++ G+ V++ KYAGN+ + +G ++ A +++A++ Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 48/93 (51.61%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 +KPLGDRV++K +T EEKT GGI L S + KP G+V+AVGEG+T+ KL +VK G +V++ KYAG E+E+NG L+V D+V I+E Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVEYNGEKFLVVHAKDLVAIVE 94 HSP 2 Score: 73.559 bits (179), Expect = 1.188e-12 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV +K EE T GG++L KEKP+ G VIAVG G E G + ++ G+ V++ KYAGN+ + +G ++ A +++A++ Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQKLAPAVKEGDRVLFDKYAGNEVE-YNGEKFLVVHAKDLVAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 45/93 (48.39%), Postives = 64/93 (68.82%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 SIKPLGDRV++K EE T GI + A+ +PQ EVVAVG G + + ++ VK G +V+YSKYAGTE++F G + I+R+DD++ I+E Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQDDILAIVE 94 HSP 2 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV IK EAEETT G+++T +KE+P V+AVGPG + +G R + + G+ V+YSKYAG + K +G Y + +++A++ Sbjct: 3 IKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAI-IDGKRTEMEVKIGDKVLYSKYAGTEVK-FEGEEYTILRQDDILAIV 93 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |