FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOAB (10 kDa chaperonin OS=Clostridium acetobutylicum GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 I+PLGDRV++K EE T GI LPS+A+ KPQ EVVAVG G V ++ + VK G +V +SKY+GTE++ + LI+R+DD++GI+E Sbjct: 3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGVVDGKEIQMQVKTGDKVFFSKYSGTEIKVDNEELLILRQDDILGIVE 94 HSP 2 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 34/93 (36.56%), Postives = 57/93 (61.29%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++PL DRV IK EAEETT G++L ++KEKP + V+AVGPG + +G + + G+ V +SKY+G + K D + + +++ ++ Sbjct: 3 IRPLGDRVVIKRLEAEETTKSGIVLPSSAKEKPQMAEVVAVGPGGV-VDGKEIQMQVKTGDKVFFSKYSGTEIK-VDNEELLILRQDDILGIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CHLPD (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain DSM 266) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++KPL DRV+VK EEKT GG+ +P + KPQ GEVVAVG GK + L++ +K G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEVSVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +LKPL DRV +K A AEE T GGL++ + KEKP G V+AVG G + + G + I G V+Y KY+G + +G +Y+ + S++ A+L Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLIIPDTGKEKPQYGEVVAVGTGKVADSGQLLEMQIKVGQKVLYGKYSGTEV-SVEGEDYLIMRESDIFAIL 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_BACHD (10 kDa chaperonin OS=Bacillus halodurans GN=groS PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +KPLGDRV+++ EEKT GI LP A+ KPQ G VVAVG G+ T K+ + VK G VI+SKYAGTE++++G +LI+RE D++ I+ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVKYDGKEYLILRESDILAII 93 HSP 2 Score: 85.8853 bits (211), Expect = 2.314e-16 Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV I+ E EE TA G++L + +KEKP G V+AVG G + E G + L + G++V++SKYAG + K DG Y+ + S+++A++ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVK-YDGKEYLILRESDILAII 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++P+ DR++VK E KT GGIF+P A+ KP GEVVAVG GK K L + VK G +V++ KY+GTE++ G + LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVIE 95 HSP 2 Score: 76.6406 bits (187), Expect = 1.404e-13 Identity = 34/93 (36.56%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 L+P+ DR+ +K E E TAGG+ + E +KEKP G V+AVG G E+G PL + G+ V++ KY+G + K +G +++ + +++ V+ Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIK-VEGQDFLIMREDDILGVI 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++PL DR+LVK E+ T GGIF+P A+ KPQ GE+VAVG GK K + I +K G +V++ KYAGT+++ G + LI+REDD++G++E Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVIE 95 HSP 2 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 L+PL DR+ +K E E+ TAGG+ + + +KEKP G ++AVG G E+G P+ + G+ V++ KYAG D K +G +++ + +++ V+ Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIK-VEGEDFLIMREDDILGVI 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 42/98 (42.86%), Postives = 70/98 (71.43%), Query Frame = 2 Query: 395 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIAFKASEVMAVLS 685 + +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G++ Y+ +++A+++ Sbjct: 8 VSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTE--EYVLLSEKDILAIVA 103 HSP 2 Score: 90.8929 bits (224), Expect = 7.193e-18 Identity = 44/94 (46.81%), Postives = 65/94 (69.15%), Query Frame = 2 Query: 104 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK ++ + VK G +V+YSKYAGT+++ ++++ E D++ I+ Sbjct: 9 STVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQEPEVKIGDKVLYSKYAGTDIKLGTEEYVLLSEKDILAIV 102
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOBB (10 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 IKPLG+RV++K EEKT GI L +A+ PQ EVVAVG G V K+++ VK G +V+YSKY+GTE++ +G ++I+++DD++ I+E Sbjct: 3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94 HSP 2 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL +RV IK EAEE T G++LT ++KE P V+AVGPG + +G + + + G+ V+YSKY+G + K DG Y+ K +++A++ Sbjct: 3 IKPLGNRVVIKKLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSI-VDGTKIEMEVKVGDKVLYSKYSGTEVK-LDGEEYMILKQDDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CLOBA (10 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 IKPLG+RV++K EEKT GI L +A+ PQ EVVAVG G V K+++ VK G +V+YSKY+GTE++ +G ++I+++DD++ I+E Sbjct: 3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSIVDGTKIEMEVKVGDKVLYSKYSGTEVKLDGEEYMILKQDDILAIVE 94 HSP 2 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 38/93 (40.86%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL +RV IK EAEE T G++LT ++KE P V+AVGPG + +G + + + G+ V+YSKY+G + K DG Y+ K +++A++ Sbjct: 3 IKPLGNRVVIKRLEAEEKTKSGIVLTGSAKEVPQEAEVVAVGPGSI-VDGTKIEMEVKVGDKVLYSKYSGTEVK-LDGEEYMILKQDDILAIV 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_CHLPB (10 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19 Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 ++KPL DRV+VK EEKT GG+++P + KPQ GEVVAVG GK + L++ V G +V+Y KY+GTE+ G ++LI+RE D+ IL+ Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEVAVEGEDYLIMRESDIFAILD 95 HSP 2 Score: 83.5741 bits (205), Expect = 1.148e-15 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +LKPL DRV +K A AEE T GGL + + KEKP G V+AVG G + + G + +A GN V+Y KY+G + +G +Y+ + S++ A+L Sbjct: 2 NLKPLADRVIVKPAPAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKVADSGQLLEMQVAVGNKVLYGKYSGTEV-AVEGEDYLIMRESDIFAIL 94
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MYCVP (10 kDa chaperonin OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |