FC876838
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MYCPA (10 kDa chaperonin OS=Mycobacterium paratuberculosis GN=groS PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MYCGI (10 kDa chaperonin OS=Mycobacterium gilvum (strain PYR-GCK) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 44/96 (45.83%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL ++ G+ V+YSKY G + K +G Y+ A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 81.2629 bits (199), Expect = 5.699e-15 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVSEGDVVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MYCAV (10 kDa chaperonin OS=Mycobacterium avium GN=groS PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_MYCA1 (10 kDa chaperonin OS=Mycobacterium avium (strain 104) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 45/96 (46.88%), Postives = 68/96 (70.83%), Query Frame = 2 Query: 401 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEG-NRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVLS 685 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG D++G R PL ++ G+TV+YSKY G + K +G Y+ A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 80.8777 bits (198), Expect = 7.444e-15 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDDDGAKRIPLDVSEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 44/92 (47.83%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 IKPLGDRV+++I EEKT GI LP A+ KPQ G+VVAVG+G+ + ++ V+ G ++I+SKYAGTE++++G +LI+RE D++ ++ Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRESDILAVI 93 HSP 2 Score: 82.4185 bits (202), Expect = 2.558e-15 Identity = 39/93 (41.94%), Postives = 61/93 (65.59%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DRV I++ E EE TA G++L + +KEKP G V+AVG G + + G R + G+ +++SKYAG + K DG Y+ + S+++AV+ Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQRVAPEVEVGDRIIFSKYAGTEVK-YDGKEYLILRESDILAVI 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_BACSK (10 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +KPLGDR++++ EEKT GI LP +A+ KPQ G+VVAVG G+ T K+ + VK G +I+SKYAGTE+++ G +LI+RE DV+ I+ Sbjct: 2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVKYEGTEYLILRESDVLAII 93 HSP 2 Score: 85.1149 bits (209), Expect = 3.947e-16 Identity = 38/93 (40.86%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DR+ I+ ++EE TA G++L +++KEKP G V+AVG G + + G + L + G+++++SKYAG + K +GT Y+ + S+V+A++ Sbjct: 2 LKPLGDRIIIEQIQSEEKTASGIVLPDSAKEKPQEGKVVAVGTGRVTDNGEKVALEVKEGDSIIFSKYAGTEVK-YEGTEYLILRESDVLAII 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_BACLD (10 kDa chaperonin OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 42/92 (45.65%), Postives = 68/92 (73.91%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 +KPLGDRV++++ EEKT GI LP +A+ KPQ G+VVA G G+ + ++ + VK G ++I+SKYAGTE+++ G ++LI+RE D++ ++ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93 HSP 2 Score: 87.0409 bits (214), Expect = 1.039e-16 Identity = 41/93 (44.09%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 LKPL DRV I++ E+EE TA G++L +++KEKP G V+A G G + E G R L + G+ +++SKYAG + K +GT+Y+ + S+++AV+ Sbjct: 2 LKPLGDRVVIELVESEEKTASGIVLPDSAKEKPQEGKVVAAGSGRVLESGERVALEVKTGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_ARTCA (10 kDa chaperonin OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=groS PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18 Identity = 44/93 (47.31%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DR+ ++ EAE+TTA GLL+ ++++EKP G V+AVGPG E+GNR P+ +A G+ V+YSKY G + K + GT Y+ A +V+A++ Sbjct: 5 IKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95 HSP 2 Score: 82.8037 bits (203), Expect = 1.959e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 SIKPL DR++V+ E+ T G+ +P +AQ KPQ GEVVAVG G+ ++ + V G VIYSKY GTE++ G +L++ DV+ I+ Sbjct: 4 SIKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRFEDGNRVPVDVAVGDVVIYSKYGGTEVKTGGTEYLVLSARDVLAIV 95
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_RENSM (10 kDa chaperonin OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 41/93 (44.09%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 +KPL DR+ ++ +AE+TTA GL++ +++KEKP G V+AVGPG +D+ GNR P+ +A G+ V+YSKY G + K + G + A +V+A++ Sbjct: 5 IKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVK-TGGEELLVLSARDVLAIV 96 HSP 2 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 107 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 382 SIKPL DR++V+ E+ T G+ +P +A+ KPQ GEVVAVG G+ ++ + V G V+YSKY GTE++ G L++ DV+ I+ Sbjct: 4 SIKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVKTGGEELLVLSARDVLAIV 96
BLAST of FC876838 vs. ExPASy Swiss-Prot
Match: CH10_DESPS (10 kDa chaperonin OS=Desulfotalea psychrophila GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18 Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 110 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 385 I+PL DR+LVK EEKT GGI +P +A+ KP G+VVAVG GK ++ + VK G V++SKY GT+++ +G + LI+REDD++GI+E Sbjct: 3 IRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVKLDGEDFLIMREDDILGIME 95 HSP 2 Score: 85.5001 bits (210), Expect = 3.022e-16 Identity = 36/93 (38.71%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 404 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIAFKASEVMAVL 682 ++PLNDR+ +K EE TAGG+++ +++KEKP+ G V+AVGPG + + G R L + G+ V++SKY G D K DG +++ + +++ ++ Sbjct: 3 IRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVK-LDGEDFLIMREDDILGIM 94 The following BLAST results are available for this feature:
BLAST of FC876838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876838 ID=FC876838; Name=FC876838; organism=Citrus clementina; type=EST; length=703bpback to top |