FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.147e-24
Identity = 58/174 (33.33%), Postives = 100/174 (57.47%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTV--IYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 544
            +MLG++A+P++I F+  LF+PESPRWL      +KA  +LS++     +++E D + ++ +EE ++      I   +      R                 I T+MYYS TI+QM+G + + LA+ L+   A TN + T+VG++L++  GR+KL   SLAG  ++L++L+  F+
Sbjct:  210 YMLGLAAIPAVIQFLGFLFLPESPRWLIQKGQTQKARRILSQMRGNQTIDEEYDSIRNSIEEEEKEATAAGPIICRMLSYPPTRRALVVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALGFL 383          

HSP 2 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  575 YGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAE 766
            Y W AL+GL LY+ FFAPGMGP+PWT+NSE+YP   R      SA +N I N++V+ TFL  AE
Sbjct:  475 YSWTALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVSLTFLHTAE 538          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: MYCT_RAT (Proton myo-inositol cotransporter OS=Rattus norvegicus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.390e-23
Identity = 58/174 (33.33%), Postives = 99/174 (56.90%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTV--IYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 544
            +MLG++A+P++I F+  LF+PESPRWL      +KA  +LS++     +++E D + ++ +EE ++      I   +      R                 I T+MYYS TI+QM+G + + LA+ L+   A TN + T+VG++L++  GR+KL   SLAG  ++L +L+  F+
Sbjct:  210 YMLGLAAIPAVIQFLGFLFLPESPRWLIQKGQTQKARRILSQMRGNQTIDEEYDSIRNSIEEEEKEASAAGPIICRMLSYPPTRRALAVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALTILALGFL 383          

HSP 2 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  575 YGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAE 766
            Y W AL+GL LY+ FFAPGMGP+PWT+NSE+YP   R      SA +N I N++V+ TFL  AE
Sbjct:  475 YSWTALVGLVLYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVSLTFLHTAE 538          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ARAE_KLEOX (Arabinose-proton symporter OS=Klebsiella oxytoca GN=araE PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.390e-23
Identity = 66/254 (25.98%), Postives = 122/254 (48.03%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIA-RLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            MLGV A+P+++L +L++F+P SPRWL       +A  VL  + D + +  DE++ +  +   +L++    ++    +++ +R                 +  +MYY+P I +MAGF +    ++ +L V  T    T + ++ +D  GRK       + + I  ++L +  +            W+++    + IA +A    PV W L SE+ P + R      S T N +SN+I+  TFLT+ + +G    F
Sbjct:  180 MLGVLALPAVVLIILVIFLPNSPRWLAEKGRHVEAEEVLRMLRDTSEKARDELNEIRESL--KLKQGGWALFK---VNRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMVATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMAIGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDAIGAAGTF 428          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.815e-23
Identity = 58/174 (33.33%), Postives = 99/174 (56.90%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTV--IYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFI 544
            +MLG++AVP++I F   LF+PESPRWL      +KA  +LS++     +++E D + +  +EE ++  +   +   +      R                 I T+MYYS TI+QM+G + + LA+ L+   A TN + T+VG++L++  GR+KL   SLAG  ++L++L+  F+
Sbjct:  221 YMLGLAAVPAVIQFFGFLFLPESPRWLIQKGQTQKARRILSQMRGNQTIDEEYDSIKNNIEEEEKEVGSAGPVICRMLSYPPTRRALIVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASVTAFTNFIFTLVGVWLVEKVGRRKLTFGSLAGTTVALIILALGFV 394          

HSP 2 Score: 78.1814 bits (191), Expect = 5.852e-14
Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 2
Query:  575 YGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAE 766
            Y W AL+GL LY+ FFAPGMGP+PWT+NSE+YP   R      S+ +N I N++V+ TFL  AE
Sbjct:  486 YSWTALLGLILYLVFFAPGMGPMPWTVNSEIYPLWARSTGNACSSGINWIFNVLVSLTFLHTAE 549          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLT3_ARATH (Probable polyol transporter 3 OS=Arabidopsis thaliana GN=PLT3 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.281e-23
Identity = 73/268 (27.24%), Postives = 128/268 (47.76%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIAR-LEDEIDHLSSAADEELRKNKTV------------IYLDVFISKE--IRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            MLG++A PS+IL   +  MPESPRWL M    E+A  ++  + +     E+    + +AA+ ++ + K V            ++ ++ I     +R                 I  V+ YSP I + AG  S    LL ++ V  T A   I+  +L+D  GR+KL L+S  G++ +L  L+ +               ++++    ++AFF+ G+GP+ W  +SE++P + R     +   VN I N  V+ +FL++ + + TG  F
Sbjct:  183 MLGIAAFPSLILAFGITRMPESPRWLVMQGRLEEAKKIMVLVSNTEEEAEERFRDILTAAEVDVTEIKEVGGGVKKKNHGKSVWRELVIKPRPAVRLILIAAVGIHFFEHATGIEAVVLYSPRIFKKAGVVSKDKLLLATVGVGLTKAFFIIIATFLLDKVGRRKLLLTSTGGMVFALTSLAVSLTMVQRFGRLAWALSLSIVSTYAFVAFFSIGLGPITWVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVF 450          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ARAE_ECOLI (Arabinose-proton symporter OS=Escherichia coli (strain K12) GN=araE PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 65/254 (25.59%), Postives = 122/254 (48.03%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIA-RLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            MLGV A+P+++L +L++F+P SPRWL       +A  VL  + D + +  +E++ +  +   +L++    ++    I++ +R                 +  +MYY+P I +MAGF +    ++ +L V  T    T + ++ +D  GRK       + + +  ++L +  +            W+++    + IA +A    PV W L SE+ P + R      S T N +SN+I+  TFLT+ + +G    F
Sbjct:  180 MLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESL--KLKQGGWALFK---INRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTF 428          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ARAE_ECO57 (Arabinose-proton symporter OS=Escherichia coli O157:H7 GN=araE PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.176e-22
Identity = 65/254 (25.59%), Postives = 122/254 (48.03%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIA-RLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            MLGV A+P+++L +L++F+P SPRWL       +A  VL  + D + +  +E++ +  +   +L++    ++    I++ +R                 +  +MYY+P I +MAGF +    ++ +L V  T    T + ++ +D  GRK       + + +  ++L +  +            W+++    + IA +A    PV W L SE+ P + R      S T N +SN+I+  TFLT+ + +G    F
Sbjct:  180 MLGVLALPAVLLIILVVFLPNSPRWLAEKGRHIEAEEVLRMLRDTSEKAREELNEIRESL--KLKQGGWALFK---INRNVRRAVFLGMLLQAMQQFTGMNIIMYYAPRIFKMAGFTTTEQQMIATLVVGLTFMFATFIAVFTVDKAGRKPALKIGFSVMALGTLVLGYCLMQFDNGTASSGLSWLSVGMTMMCIAGYAMSAAPVVWILCSEIQPLKCRDFGITCSTTTNWVSNMIIGATFLTLLDSIGAAGTF 428          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.536e-22
Identity = 73/266 (27.44%), Postives = 134/266 (50.38%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEI-----DHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXI------TTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVL--LSWAFIXXXXXXXXXV--------YGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAE 766
            ++G+S +P+++ F    F+P++PR+  M  D ++A +VL + Y     EDEI     + LSS       KN    + ++   KE+                  I       ++MY+S TI +  GF+++     +S+ V+GTN V T++  + ID  GR+ + L  L G+ ++LV+  +++ F+         V        +G + ++ + +Y AF+A G+G VPW   SE++P+  RG+    +   N   +L++A TFLT+ +
Sbjct:  271 LVGLSLIPTVLQFSFFCFLPDTPRYYVMKGDLKRAKMVLKRSY--VNTEDEIIDQKVEELSSLNQSIPGKNPITKFWNMV--KELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSA---VSIIVSGTNFVFTLIAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFIIVYAAFYALGIGTVPWQ-QSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQ 528          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.839e-22
Identity = 79/274 (28.83%), Postives = 128/274 (46.72%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVL-----------SKIYDIARLEDEIDHLSSAADEELRKNKTV----IYLDVFI--SKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW---IALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            +MLG+ AVPS+ L + +L MPESPRWL M      A  VL           S++ DI R     D ++   D  +  NK      ++ D+ +  +  +R                 I  V+ YSPTI   AG +S +  LL ++AV     +  +VG  L+D FGR+ L L+S+ G+  SL  L  + +            W   +A+  +  ++A F+ G GPV W   SE++P + R     +   +N + + I+  TFL++++ +  G  F
Sbjct:  186 FMLGIGAVPSVFLAIGVLAMPESPRWLVMQGRLGDAFKVLDKTSNTKEEAISRLNDIKRAVGIPDDMTD--DVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFSQQASGIDAVVLYSPTIFSRAGLKSKNDQLLATVAVGVVKTLFIVVGTCLVDRFGRRALLLTSMGGMFFSLTALGTS-LTVIDRNPGQTLKWAIGLAVTTVMTFVATFSLGAGPVTWVYASEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAF 456          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: YNCC_BACSU (Putative metabolite transport protein yncC OS=Bacillus subtilis GN=yncC PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.301e-21
Identity = 69/254 (27.17%), Postives = 119/254 (46.85%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            +ML + AVP+I+LF  ML +PESPRWL       +A+ VL +I +  R E E   +  A +++    K    L  F +  +R                 + ++MYY   I++ +GF     AL+ ++     + +  I GI+L+    R+ + L  LAG   +L+L++   I            ++ L    L++AF    +GPV W + +E++P++ RG+  G+S     I N ++   F  +   VG    F
Sbjct:  175 YMLVICAVPAIMLFASMLKVPESPRWLISKGKNSEALRVLKQIREDKRAEAECREIQEAVEKDTALEKA--SLKDFSTPWLRRLLWIGIGVAIVNQITGVNSIMYYGTQILKESGF-GTKAALIANIGNGLISVIAVIFGIWLVGKVRRRPILLIGLAGTTTALLLIA---IFSIVLDGSMALPYVVLSLTVLFLAFMQGCVGPVTWLVIAEIFPQRLRGLGSGISVFFLWILNFVIGFAFPILLSSVGLSFTF 422          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
MYCT_MOUSE8.147e-2433.33Proton myo-inositol cotransporter OS=Mus musculus ... [more]
MYCT_RAT1.390e-2333.33Proton myo-inositol cotransporter OS=Rattus norveg... [more]
ARAE_KLEOX1.390e-2325.98Arabinose-proton symporter OS=Klebsiella oxytoca G... [more]
MYCT_HUMAN1.815e-2333.33Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
PLT3_ARATH5.281e-2327.24Probable polyol transporter 3 OS=Arabidopsis thali... [more]
ARAE_ECOLI1.176e-2225.59Arabinose-proton symporter OS=Escherichia coli (st... [more]
ARAE_ECO571.176e-2225.59Arabinose-proton symporter OS=Escherichia coli O15... [more]
ITR2_YEAST1.536e-2227.44Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
PLT2_ARATH5.839e-2228.83Putative polyol transporter 2 OS=Arabidopsis thali... [more]
YNCC_BACSU1.301e-2127.17Putative metabolite transport protein yncC OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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