FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: QAY_NEUAF (Quinate permease OS=Neurospora africana GN=qa-y PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 60/254 (23.62%), Postives = 108/254 (42.52%), Query Frame = 2
Query:   29 WML--GVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVI---YLDVFIS---KEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            W++   V  +P+ +LF+   ++PESPRWLF    +E+AI VL  I ++   +  I    S  D +L++    +   +   F+S    ++R                 I  + YYSPT+ +  G    +   L +        V TI+  ++L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R +    +A  N   N I++
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGRREEAIKVLCWIRNLEPTDRYIVEEISYIDADLQRYAREVGKGFWKPFLSLKQPKVRWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFVGATGGSLCMWFIG-AYIKIAGPGTTKTEEAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIIS 446          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12
Identity = 59/249 (23.69%), Postives = 111/249 (44.58%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKA---ILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISL------VLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFL 754
            LG++AVP+ I+ V  LF+ ++P  L      ++A   +L L  + +IA +E E+  L  ++   +   +  +++   + +  R                 IT   +Y+P + +  GF S   AL+ +  +   N    ++   +ID FGR+ L ++   G+++ L      VLL+              Y    ++ L +Y A F    GP+ W + SE++P + R     +S  VN  +   ++ TFL
Sbjct:  203 LGLAAVPAAIMTVGCLFISDTPSSLLARGKHDEAHTSLLKLRGVENIADVETELAELVRSSQLAIEA-RAELFMKTILQRRYRPHLVVAVVIPCFQQLTGITVNAFYAPVLFRSVGFGSGP-ALIATFILGFVNLGSLLLSTMVIDRFGRRFLFIAG--GILMLLCQIAVAVLLAVTVGATGDGEMKKGYAVTVVVLLCIYAAGFGWSWGPLSWLVPSEIFPLKIRPAGQSLSVAVNFAATFALSQTFL 447          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STA_RICCO (Sugar carrier protein A OS=Ricinus communis GN=STA PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 59/244 (24.18%), Postives = 106/244 (43.44%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVG-TIVGIYLIDHFGRKKLALSS----LAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            LG++A P++++ +  L +PE+P  L      EK   VL KI     ++ E   +  A+  EL  +    + ++ + K  R                 I  +++Y+P + Q  GF  N  A L S AV G      T + I  +D  GR+ L +S     +   +I  ++L   F           +  + +I + L++  F    GP+ WT+ SE++P + R     ++  VN     ++A +F
Sbjct:  207 LGLAAAPALLMTIGGLLLPETPNSLIEQGLHEKGRNVLEKIRGTKHVDAEFQDMLDAS--ELANSIKHPFRNI-LEKRNRPQLVMAIFMPTFQILTGINIILFYAPPLFQSMGFGGN--AALYSSAVTGAVLCSSTFISIATVDRLGRRFLLISGGIQMITCQVIVAIILGVKF--GDNQQLSKSFSVLVVIMICLFVLAFGWSWGPLGWTVPSEIFPLETRSAGQSITVAVNLFFTFVIAQSF 443          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: QAY_NEUCR (Quinate permease OS=Neurospora crassa GN=qa-y PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 58/254 (22.83%), Postives = 108/254 (42.52%), Query Frame = 2
Query:   29 WML--GVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVI---YLDVFIS---KEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            W++   V  +P+ +LF+   ++PESPRWL+    +E+A+ VL  I ++   +  I    S  D +L +    +   +   F+S   ++++                 I  + YYSPT+ +  G        L +        V TI+  ++L+D  GR+++     AG  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R +    +A  N   N I++
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLYANGKREEAMKVLCWIRNLEPTDRYIVQEVSFIDADLERYTRQVGNGFWKPFLSLKQRKVQWRFFLGGMLFFWQNGSGINAINYYSPTVFRSIGITGTDTGFLTTGIFGVVKMVLTIIWLLWLVDLVGRRRILFIGAAGGSLCMWFIG-AYIKIADPGSNKAEDAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIIS 446          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12
Identity = 59/252 (23.41%), Postives = 106/252 (42.06%), Query Frame = 2
Query:   20 LCIWMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +C W+   S +P+ +L + M    ESP+WLF      +A     ++   + ++  +  L    D +      V+ L   +                      I  V Y+S T+ + AG  S+    L ++ V  +N +G+++ + L+D  GRK L L S  G+  ++ L   A               +++ G  +++  FA G GPVP  L  E++P + R        +V+ + N  V   FL + E +G
Sbjct:  211 VCFWL---STIPAALLALGMFLCAESPQWLFKQGKIAEAEAEFERLLGGSHVKTAMAELYKL-DLDKTDEPDVVSLSELLYGRHSRVVFIGSTLFALQQLSGINAVFYFSSTVFKSAGVPSD----LGNIFVGVSNLLGSVIAMVLMDKVGRKLLLLWSFIGMAAAMALQVGATSSYLPHFSALC---LSVGGTLVFVLTFALGAGPVPGLLLPEIFPSRIRAKAMAFCMSVHWVINFFVGLLFLRLLEKLG 451          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: QAY_NEUTR (Quinate permease OS=Neurospora terricola GN=qa-y PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 58/254 (22.83%), Postives = 108/254 (42.52%), Query Frame = 2
Query:   29 WML--GVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVI---YLDVFIS---KEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVG-IYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY-------GWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            W++   V  +P+ +LF+   ++PESPRWLF    +E+A+ VL  + ++   +  I    S  D +L +    +   +   F+S   ++++                 I  + YYSPT+ +  G    +   L +        V TIV  ++L+D  GR+++      G  + +  +  A+I                  G  A+    L+ AF+ P     PW +NSE++ +  R +    +A  N   N I++
Sbjct:  194 WLIPFAVQLIPAGLLFLGSFWIPESPRWLFANGKREEAMKVLCWMRNLEPTDRYIVEEVSYIDADLERYAREVGKGFWKPFLSLKQRKVQWRFFLGGMLFLWQNGSGINAINYYSPTVFRSIGITGTNTGFLTTGIFGVVKMVLTIVWLLWLVDLVGRRRMLFIGATGGSLCMWFIG-AYIKIAGPGSTKAEDAKLTSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDQNTRSLGQASAAANNWFWNFIIS 446          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ERDL1_ARATH (Sugar transporter ERD6-like 1 OS=Arabidopsis thaliana GN=SUGTL4 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.343e-12
Identity = 53/238 (22.27%), Postives = 105/238 (44.12%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIY-DIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            +SA+P  I  + + F+PESPRWL M   + +  + L ++  +   + +E   +    +   R++++ +  D+F  K                     + +  Y+  I   AGF S+    +L++ +   +    I+ ++ +D  GR+ L +SS  G+ I   L+  ++              I ++GL  Y+  F  G+G +PW + SEV+P   +   G +    N   + I+  +F
Sbjct:  184 LSAIPCGIQMICLFFIPESPRWLAMYGRERELEVTLKRLRGENGDILEEAAEIRETVETSRRESRSGLK-DLFNMKNAHPLIIGLGLMLLQQFCGS-SAISAYAARIFDTAGFPSDIGTSILAVILVPQS----IIVMFAVDRCGRRPLLMSSSIGLCICSFLIGLSYYLQNHGDFQEFCSPILIVGLVGYVLSFGIGLGGLPWVIMSEVFPVNVKITAGSLVTVSNWFFSWIIIFSF 415          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR5_HORSE (Solute carrier family 2, facilitated glucose transporter member 5 OS=Equus caballus GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11
Identity = 56/252 (22.22%), Postives = 112/252 (44.44%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFM-TSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGA 784
            +LG++A+P+ +  +L+ F PESPR+L +   D   A   L ++     ++ E++ +    DE  +    +  L +F  + +R                 +  + YY+  I   AG +   +   +++     N + TI  ++++++ GR+ L L   +   I+  +L+ A              +I+++ +  Y+   A G  P+P  L +EV+ +  R     +  TV+ +SN  V   F  +   VG GA
Sbjct:  195 LLGLTAIPAALQLLLLPFFPESPRYLLIQKKDAAAAKNALKRLRGWDDVDAEMEEI-QLEDEAEKAAGIISVLTMFRMRSLRWQVISIIILMGGQQLSGVNAIYYYADQIYLSAGVKDQDVQ-YVTVGTGAVNVLMTICAVFVVEYLGRRALLLLGFSVCFIACCVLTVALALQDRVSWMP---YISIVCVISYVIGHALGPSPIPALLITEVFLQSSRSAAYMVGGTVHWLSNFAVGLVFPFIQ--VGLGA 439          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: MSSP2_ARATH (Monosaccharide-sensing protein 2 OS=Arabidopsis thaliana GN=MSSP2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 2
Query:  326 ITTVMYYSPTIVQMAG---------FQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            I  V+YY+P I++ AG           S+  +LL+S            V + L+D  GR+ L L+++  +I SL++L    I         V+  ++ + + LY  FF  G GP P  L SE++P + RGIC  + A    I ++IV  +   + + +G    F
Sbjct:  523 INGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPAIAVAMRLMDLSGRRTLLLTTIPILIASLLVL---VISNLVHMNSIVHAVLSTVSVVLYFCFFVMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVF 683          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR7_RAT (Solute carrier family 2, facilitated glucose transporter member 7 OS=Rattus norvegicus GN=Slc2a7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.550e-11
Identity = 58/249 (23.29%), Postives = 110/249 (44.18%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRW-LFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L ++ VP+++  + + F PESPR+ L    D+  A   L ++     +E E++ + + A  E R    +  L +   + +R                 I  V YY+ TI   AG ++ H +  +++     N V TI    L++  GR+ L L+   G+  S  L+    +          Y  + +I +  YIA  + G  PVP  + +E++ +  R     +   V+ ++N I+   F ++ E +G
Sbjct:  201 LLALTGVPALLQLLTLPFFPESPRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAE-RAEGHLSVLHLCALRSLRWQLLSIIVLMAGQQLSGINAVNYYADTIYTSAGVEAAH-SQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGY-GICGSACLVLTVVLLFQNRVPELSY--LGIICVFAYIAGHSIGPSPVPPVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIG 444          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
QAY_NEUAF1.883e-1223.62Quinate permease OS=Neurospora africana GN=qa-y PE... [more]
STP5_ARATH5.477e-1223.69Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
STA_RICCO7.154e-1224.18Sugar carrier protein A OS=Ricinus communis GN=STA... [more]
QAY_NEUCR7.154e-1222.83Quinate permease OS=Neurospora crassa GN=qa-y PE=3... [more]
PLST2_ARATH7.154e-1223.41Probable plastidic glucose transporter 2 OS=Arabid... [more]
QAY_NEUTR9.343e-1222.83Quinate permease OS=Neurospora terricola GN=qa-y P... [more]
ERDL1_ARATH9.343e-1222.27Sugar transporter ERD6-like 1 OS=Arabidopsis thali... [more]
GTR5_HORSE2.081e-1122.22Solute carrier family 2, facilitated glucose trans... [more]
MSSP2_ARATH2.718e-1128.66Monosaccharide-sensing protein 2 OS=Arabidopsis th... [more]
GTR7_RAT3.550e-1123.29Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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