FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.301e-21
Identity = 78/273 (28.57%), Postives = 128/273 (46.89%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYD-----IARLEDEIDHLSSAADEELRKNKTV---------IYLDVFI--SKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW---IALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            +MLGV AVPS+ L + +L MPESPRWL +      A  VL K  +     I+RL+D I       D+       V         ++ D+ +  +  +R                 I  V+ YSPTI   AG +S +  LL ++AV     +  +VG  ++D FGR+ L L+S+ G+ +SL  L  + +            W   +A+  +  ++A F+ G GPV W   SE++P + R     +   +N + + I+  TFL++++ +  G  F
Sbjct:  186 FMLGVGAVPSVFLAIGVLAMPESPRWLVLQGRLGDAFKVLDKTSNTKEEAISRLDD-IKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPTPSVRHILIACLGIHFAQQASGIDAVVLYSPTIFSKAGLKSKNDQLLATVAVGVVKTLFIVVGTCVVDRFGRRALLLTSMGGMFLSLTALGTS-LTVINRNPGQTLKWAIGLAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAF 456          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.898e-21
Identity = 72/256 (28.12%), Postives = 125/256 (48.83%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCI--SNLIVAPTFLTVAELVGTGAPF 790
            +ML ++++P++ LF  M+ MPESPRWL     +E A+ VL KI D  R   E+  +  A  +E +  K   + D+ +   +R                 + ++MYY   I++ +GFQ+   AL+ ++A    + + T VGI+L+   GR+ + ++ L G   +L+L+    I            ++ L     ++AF    + PV W + SE++P + RG+  GM  TV C+   N  V+ TF  +   +G    F
Sbjct:  175 FMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDEKRAAAELQEIEFAFKKEDQLEKAT-FKDLSV-PWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQT-EAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIG---IFSLVLEGSPALPYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGL--GMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTF 422          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR2_BOVIN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Bos taurus GN=SLC2A2 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.898e-21
Identity = 66/249 (26.51%), Postives = 118/249 (47.39%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG+SAVP+I+  +L+ F PESPR+L++  D+E KA   L ++     +  +I  +     EE    K V  + +F +   R                 I  + YYS +I Q AG      A   ++ V   N V T V ++L++  GR+ L L  ++G+ +  + +S   +            ++++  + L+++FF  G GP+PW + +E + +  R     ++A  N   N I+A  F  +A+  G
Sbjct:  219 LLGLSAVPAILQCLLLFFCPESPRYLYIKLDEEAKAKKSLKRLRGSDDITKDITEMRKER-EEASNEKKVSIIQLFTNASYRQPILVALMLHAAQQFSGINGIFYYSTSIFQTAGISQPVYA---TIGVGAVNTVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFMSVGLVLLSKFPWM---NYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTGNFIIALCFQYIADFCG 460          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLT4_ARATH (Probable polyol transporter 4 OS=Arabidopsis thaliana GN=PLT4 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.784e-21
Identity = 76/257 (29.57%), Postives = 119/257 (46.30%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLS----SAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            ML V  +PS+ +   +  +PESPRWL M    + A  VL K  +  R ++  + L+    +AA  E  +++ V    +  S  +R                 I   +YYSP I++ AG Q     L  ++AV  T  V  +   +LID  GRK L   S  G+ + L  LS+                +AL+ +   +AFF+ GMGPV W L SE++P + R     + A  N + + +VA +FL+V+  +  G  F
Sbjct:  216 MLAVGILPSVFIGFALCVIPESPRWLVMKGRVDSAREVLMKTNE--RDDEAEERLAEIQLAAAHTEGSEDRPVWRELLSPSPVVRKMLIVGFGIQCFQQITGIDATVYYSPEILKEAGIQDETKLLAATVAVGVTKTVFILFATFLIDSVGRKPLLYVSTIGMTLCLFCLSFTLTFLGQGTLGIT---LALLFVCGNVAFFSIGMGPVCWVLTSEIFPLRLRAQASALGAVGNRVCSGLVAMSFLSVSRAITVGGTF 467          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.455e-21
Identity = 75/270 (27.78%), Postives = 128/270 (47.41%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIAR-----------LEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-------IXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLT-VAELVGTG 781
            WM+G++ VP+     +++++PESPR L      ++A   L++IY  A             E   D  S +  +++ K    +Y +    + +                    ++MY+S TI ++ GF +        L +A TN V TIV   +ID FGR+ L L ++ G+I +L++ + AF                  +  + LI + +Y+A +A G+G +PW   SE++P   RG+  GMS  VN   NL +  +FLT ++E+  TG
Sbjct:  248 WMVGLAMVPAAFQLFILIWLPESPRLLVKKERSQEAYNTLARIYPTAHPYEIKTKLYLIQEGVRDPFSGSRWQKIVKTFKELYFNPSNFRAL----ILACGLQAMQQLSGFNSLMYFSSTIFEVVGFNN---PTATGLIIAATNFVFTIVAFGVIDFFGRRILLLLTVWGMIAALIVCAVAFHFLPKDENGNYTSGQSNAWAIVVLISMIVYVASYASGLGNLPWQ-QSELFPMSVRGLGTGMSTAVNWAGNLGIGASFLTLMSEITPTG 509          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: XYLE_ECOLI (D-xylose-proton symporter OS=Escherichia coli (strain K12) GN=xylE PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.431e-21
Identity = 69/248 (27.82%), Postives = 109/248 (43.95%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYD-------IARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            +M     +P+++  +L+  +PESPRWL     QE+A  +L KI         +  ++  +DH        L     VI + V +S                     I  V+YY+P + +  G  S  +ALL ++ V   N   T++ I  +D FGRK L +    G+ I +  L  AF            G +AL+ +  Y+A FA   GPV W L SE++P   RG    ++     ++N  V+ TF
Sbjct:  201 YMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLS--------------IFQQFVGINVVLYYAPEVFKTLG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP-------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTF 426          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.431e-21
Identity = 69/248 (27.82%), Postives = 109/248 (43.95%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYD-------IARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            +M     +P+++  +L+  +PESPRWL     QE+A  +L KI         +  ++  +DH        L     VI + V +S                     I  V+YY+P + +  G  S  +ALL ++ V   N   T++ I  +D FGRK L +    G+ I +  L  AF            G +AL+ +  Y+A FA   GPV W L SE++P   RG    ++     ++N  V+ TF
Sbjct:  201 YMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLS--------------IFQQFVGINVVLYYAPEVFKTLG-ASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAP-------GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTF 426          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLT6_ARATH (Probable polyol transporter 6 OS=Arabidopsis thaliana GN=PLT6 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.431e-21
Identity = 68/269 (25.28%), Postives = 121/269 (44.98%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFM--------------TSDQEKAILVLSKIYDIARLEDE-IDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWI-ALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            MLG++AVPS++L   +L MPESPRWL M              ++  E+A L    I   A ++ + +D +     ++         L +  +  +R                 I  V+ Y P I + AG  +     L+++ V             L+D  GR+KL L+S+ G++I+L +L +             +  + +++    ++AFF+ G+GP+ W  +SEV+P + R     +   VN + N  V+ +FL++   + TG  F
Sbjct:  178 MLGIAAVPSLVLAFGILKMPESPRWLIMQGRLKEGKEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKTHGEGVWKELILRPTPAVRRVLLTALGIHFFQHASGIEAVLLYGPRIFKKAGITTKDKLFLVTIGVGIMKTTFIFTATLLLDKVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKLAWALVLSIVAAYSFVAFFSIGLGPITWVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAF 446          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR2_RAT (Solute carrier family 2, facilitated glucose transporter member 2 OS=Rattus norvegicus GN=Slc2a2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.101e-20
Identity = 62/249 (24.90%), Postives = 120/249 (48.19%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG+SAVP+++  +L+LF PESPR+L++  ++E +A   L ++     +  +I+ +    +E   + K  + + +F     R                 I  + YYS +I Q AG      A   ++ V   N + T V + L++  GR+ L L+ + G+    V +S   +            ++++  + L+++FF  G GP+PW + +E + +  R     ++A  N + N I+A  F  +A+ +G
Sbjct:  219 LLGLSAVPALLQCLLLLFCPESPRYLYLNLEEEVRAKKSLKRLRGTEDITKDINEMRKEKEEASTEQKVSV-IQLFTDPNYRQPIVVALMLHLAQQFSGINGIFYYSTSIFQTAGISQPVYA---TIGVGAINMIFTAVSVLLVEKAGRRTLFLAGMIGMFFCAVFMSLGLVLLDKFTWM---SYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFIIALCFQYIADFLG 460          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.438e-20
Identity = 70/272 (25.74%), Postives = 129/272 (47.43%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIAR---LEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXI------TTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----------IXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            ++G+S +P+ + F  + F+P++PR+  M  D  +A  VL + Y       +E +++ L +       KN      +    KE+                  I       ++MY+S TI +  GF+++     +S+ V+GTN + T+V  + ID  GR+ + L  L G+ ++LV+ S AF          +          +G + ++ + ++ AF+A G+G VPW   SE++P+  RGI    +   N   +L++A TFLT+ + +     F
Sbjct:  248 LVGLSLIPTAVQFTCLCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTI--KELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSA---VSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQ-QSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTF 513          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PLT1_ARATH1.301e-2128.57Putative polyol transporter 1 OS=Arabidopsis thali... [more]
IOLT_BACSU2.898e-2128.13Major myo-inositol transporter iolT OS=Bacillus su... [more]
GTR2_BOVIN2.898e-2126.51Solute carrier family 2, facilitated glucose trans... [more]
PLT4_ARATH3.784e-2129.57Probable polyol transporter 4 OS=Arabidopsis thali... [more]
ITR1_SCHPO6.455e-2127.78Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]
XYLE_ECOLI8.431e-2127.82D-xylose-proton symporter OS=Escherichia coli (str... [more]
XYLE_ECO578.431e-2127.82D-xylose-proton symporter OS=Escherichia coli O157... [more]
PLT6_ARATH8.431e-2125.28Probable polyol transporter 6 OS=Arabidopsis thali... [more]
GTR2_RAT1.101e-2024.90Solute carrier family 2, facilitated glucose trans... [more]
ITR1_YEAST1.438e-2025.74Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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