FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR2_HUMAN (Solute carrier family 2, facilitated glucose transporter member 2 OS=Homo sapiens GN=SLC2A2 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.453e-20
Identity = 65/249 (26.10%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG+S V +I+  +L+ F PESPR+L++  D+E KA   L ++     +  +I+ +    +E   + K  I + +F +   R                 I  + YYS +I Q AG      A   ++ V   N V T V ++L++  GR+ L L  ++G+ +  + +S   +            ++++I + L+++FF  G GP+PW + +E + +  R     ++A  N   N IVA  F  +A+  G
Sbjct:  221 LLGLSGVRAILQSLLLFFCPESPRYLYIKLDEEVKAKQSLKRLRGYDDVTKDINEMRKEREEASSEQKVSI-IQLFTNSSYRQPILVALMLHVAQQFSGINGIFYYSTSIFQTAGISKPVYA---TIGVGAVNMVFTAVSVFLVEKAGRRSLFLIGMSGMFVCAIFMSVGLVLLNKFSWM---SYVSMIAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPAALAIAAFSNWTCNFIVALCFQYIADFCG 462          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.184e-20
Identity = 60/249 (24.10%), Postives = 120/249 (48.19%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG+SAVP+++  +L+LF PESPR+L++  ++E +A   L ++     +  +I+ +    +E   + K  + + +F     R                 I  + YYS +I Q AG      A   ++ V   N + T V + L++  GR+ L L+ + G+    + +S   +            ++++  + L+++FF  G GP+PW + +E + +  R     ++A  N + N ++A  F  +A+ +G
Sbjct:  220 LLGLSAVPALLQCLLLLFCPESPRYLYIKLEEEVRAKKSLKRLRGTEDVTKDINEMKKEKEEASTEQKVSV-IQLFTDANYRQPILVALMLHMAQQFSGINGIFYYSTSIFQTAGISQPVYA---TIGVGAINMIFTAVSVLLVEKAGRRTLFLTGMIGMFFCTIFMSVGLVLLDKFAWM---SYVSMTAIFLFVSFFEIGPGPIPWFMVAEFFSQGPRPTALALAAFSNWVCNFVIALCFQYIADFLG 461          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_PIG (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Sus scrofa GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.137e-20
Identity = 71/249 (28.51%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L V  +P+++  VL+ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:  148 LLSVIFIPALLQCVLLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEESRQMMREKKVTI-LELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG 389          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_SHEEP (Solute carrier family 2, facilitated glucose transporter member 1 (Fragment) OS=Ovis aries GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.321e-20
Identity = 70/249 (28.11%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L V  +P+++  +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:   87 LLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEESRQMMREKKVTI-LELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG 328          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_RAT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Rattus norvegicus GN=Slc2a1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.321e-20
Identity = 70/249 (28.11%), Postives = 118/249 (47.39%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L V  +P+++  +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +     + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:  189 LLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKKVTI-LELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCG 430          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_BOVIN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.321e-20
Identity = 70/249 (28.11%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L V  +P+++  +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:  189 LLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEESRQMMREKKVTI-LELFRSAAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLERLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG 430          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe GN=itr2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.217e-19
Identity = 74/268 (27.61%), Postives = 126/268 (47.01%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRK-----NKTVIYLD----VFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IXXXXXXXXXVYGW--IALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELV---GTGAPF 790
            M G+ A P++   + + + PESPR+L   +  EK   +LS+I+  A+   EI +  S   E ++      NK   +      +F     R                    + Y+S  I Q  GF+++   + +S+ V  TN V TIV    ID  GR+++ L + A +I  L L + A+             GW  + L  + +++A +A G+G +PW   +E++P + R +  G S  +N + NLI++ +FLT+ E +   GT A F
Sbjct:  242 MFGIGAAPALGQLISLFWTPESPRYLLRHNHVEKVYKILSRIHPEAK-PAEIAYKVSLIQEGVKVDFPEGNKFQHFFHSLKVLFTVPSNRRSLFIGCFLQWFQQFSGTNAIQYFSAIIFQSVGFKNS---ISVSIVVGATNFVFTIVAFMFIDRIGRRRILLCTSAVMIAGLALCAIAYHFLPADTTQNTNSGWQYVVLASIIIFLASYASGIGNIPWQ-QAELFPMEVRALGAGFSTAINWVGNLIISASFLTMMESITPTGTFALF 504          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_MOUSE (Solute carrier family 2, facilitated glucose transporter member 1 OS=Mus musculus GN=Slc2a1 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.217e-19
Identity = 70/249 (28.11%), Postives = 118/249 (47.39%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L V  +P+++  +L+ F PESPR+L +  ++E +A  VL K+   A +  ++  +     + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:  189 LLSVIFIPALLQCILLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTRDLQEMKEEGRQMMREKKVTI-LELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAVLMTIALALLERLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG 430          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.590e-19
Identity = 66/250 (26.40%), Postives = 120/250 (48.00%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGT 778
            +LG   VP+++  +++ F PESPR+L +  ++E KA  VL K+     +  ++  +   + + +R+ K  I +++F S   R                 I  V YYS +I + +G +    A + S  V   N   T+V +++++  GR+ L L  LAG+    +L++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  +A+L G+
Sbjct:  188 LLGFIFVPALLQCIILPFAPESPRFLLINRNEENKAKSVLKKLRGTTDVSSDLQEMKEESRQMMREKKVTI-MELFRSPMYRQPILIAIVLQLSQQLSGINAVFYYSTSIFEKSGVEQPVYATIGSGVV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTLLDQMPWMSYLSIVAIFG---FVAFFEIGPGPIPWFIVAELFSQGPRPAAFAVAGLSNWTSNFIVGMGFQYIAQLCGS 430          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.590e-19
Identity = 68/253 (26.88%), Postives = 122/253 (48.22%), Query Frame = 2
Query:   11 VPGLCIWMLGVSAVPSIILFVLMLFMPESPRWLF---MTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-IXXXXXXXXXVYGWIAL---IGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPT 748
            VP   + +LG+  +P  +L   + F+PESPRWL    MT + E ++ VL        +  E++ +  +     ++N TV ++D+   +                    I  V++YS TI + AG  S++ A   +  V     V T +  +L+D  GR+ L   S  G+ ISLV+++ AF +         +Y W+++   +G+   + FF+ GMGP+PW + SE+ P   +G+ G ++   N   + ++  T
Sbjct:  197 VPWRILAVLGI--LPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFE--TDITVEVNEIKRSVASSTKRN-TVRFVDLK-RRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNAA---TFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANWFFSWLITMT 440          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
GTR2_HUMAN2.453e-2026.10Solute carrier family 2, facilitated glucose trans... [more]
GTR2_MOUSE4.184e-2024.10Solute carrier family 2, facilitated glucose trans... [more]
GTR1_PIG7.137e-2028.51Solute carrier family 2, facilitated glucose trans... [more]
GTR1_SHEEP9.321e-2028.11Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RAT9.321e-2028.11Solute carrier family 2, facilitated glucose trans... [more]
GTR1_BOVIN9.321e-2028.11Solute carrier family 2, facilitated glucose trans... [more]
ITR2_SCHPO1.217e-1927.61Myo-inositol transporter 2 OS=Schizosaccharomyces ... [more]
GTR1_MOUSE1.217e-1928.11Solute carrier family 2, facilitated glucose trans... [more]
GTR1_CHICK1.590e-1926.40Solute carrier family 2, facilitated glucose trans... [more]
ERDL6_ARATH1.590e-1926.88Sugar transporter ERD6-like 6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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