FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR2_CHICK (Solute carrier family 2, facilitated glucose transporter member 2 OS=Gallus gallus GN=SLC2A2 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.077e-19
Identity = 67/253 (26.48%), Postives = 115/253 (45.45%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKN-----KTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG+S V +++ F L+L  PESPR+L++     K   V      + RL    D +   A+ E  K      K V    +F S + R                 I  + YYS  I Q AG      A   ++ V   N V T++ ++L++  GR+ L L+ L G++IS V ++   +            +++++ + L++ FF  G GP+PW + +E++ +  R     ++   N   N IV   F  +A+L G
Sbjct:  233 LLGLSGVAALLQFFLLLLCPESPRYLYI-----KLGKVEEAKKSLKRLRGNCDPMKEIAEMEKEKQEAASEKRVSIGQLFSSSKYRQAVIVALMVQISQQFSGINAIFYYSTNIFQRAGVGQPVYA---TIGVGVVNTVFTVISVFLVEKAGRRSLFLAGLMGMLISAVAMTVGLVLLSQFAWM---SYVSMVAIFLFVIFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFCNWACNFIVGMCFQYIADLCG 474          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.712e-19
Identity = 67/249 (26.91%), Postives = 119/249 (47.79%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L +  +P+++  +++ F PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    +L++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:  189 LLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTI-LELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCG 430          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR1_RABIT (Solute carrier family 2, facilitated glucose transporter member 1 OS=Oryctolagus cuniculus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.626e-19
Identity = 69/249 (27.71%), Postives = 118/249 (47.39%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +L V  VP+++  +++   PESPR+L +  ++E +A  VL K+   A +  ++  +   + + +R+ K  I L++F S   R                 I  V YYS +I + AG Q    A + S  V   N   T+V +++++  GR+ L L  LAG+    VL++ A               +A+ G   ++AFF  G GP+PW + +E++ +  R     ++   N  SN IV   F  V +L G
Sbjct:  189 LLSVIFVPALLQCIVLPLCPESPRFLLINRNEENRAKSVLKKLRGNADVTRDLQEMKEESRQMMREKKVTI-LELFRSPAYRQPILSAVVLQLSQQLSGINAVFYYSTSIFEKAGVQQPVYATIGSGIV---NTAFTVVSLFVVERAGRRTLHLIGLAGMAACAVLMTIALALLEQLPWMSYLSIVAIFG---FVAFFEVGPGPIPWFIVAELFSQGPRPAAVAVAGFSNWTSNFIVGMCFQYVEQLCG 430          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19
Identity = 62/251 (24.70%), Postives = 117/251 (46.61%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMT-SDQEKAILVLSKIYDIARLEDEIDHLSSAADEELR--KNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG++ +P+I+    + F PESPR+L +   ++++A  +L +++      D I  +    DE +R  + K V  L++F S                     I  V YYS  I Q AG Q     +  ++     N + T+V ++L++  GR+ L +  L G+ +  V ++   I            ++ ++ + +Y+AFF  G GP+PW + +E++ +  R     ++   N  SN +V   F + A  +G
Sbjct:  187 LLGLTIIPAILQSAALPFCPESPRFLLINRKEEDQATEILQRLWGTP---DVIQEIQEMKDESIRMSQEKQVTVLELFKSPSYFQPLLISVVLQLSQQFSGINAVFYYSTGIFQDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMT---ISLLLKDEYEAMSFVCIVAILVYVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMFFPSAAAYLG 428          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR3_BOVIN (Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.042e-19
Identity = 69/262 (26.34%), Postives = 121/262 (46.18%), Query Frame = 2
Query:    8 GVPGLCIWMLGVSAVPSIILFVLMLFMPESPRWLFMT-SDQEKAILVLSKIYDIARLEDEIDHLSSAADEELR--KNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALI---GLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            G   L   +LG + +P+II    + F PESPR+L +   ++EKA  +L +++     ED    +    DE +R  + K V  L++F +   R                 I  V YYS  I + AG Q    A   ++     N + T+V ++L++  GR+ L L  L G+    +L++ + +          Y W++ I    + +++AFF  G GP+PW + +E++ +  R     ++   N  SN +V   F + A  +G
Sbjct:  179 GTEDLWPLLLGFTILPAIIQCAALPFCPESPRFLLINRKEEEKAKEILQRLWGT---EDVAQDIQEMKDESMRMSQEKQVTVLELFRAPNYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVQEPVYA---TIGAGVVNTIFTVVSVFLVERAGRRTLHLIGLGGMAFCSILMTISLLLKDN------YSWMSFICIGAILVFVAFFEIGPGPIPWFIVAELFGQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLG 428          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR3_MOUSE (Solute carrier family 2, facilitated glucose transporter member 3 OS=Mus musculus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.891e-19
Identity = 62/251 (24.70%), Postives = 118/251 (47.01%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMTSDQE-KAILVLSKIYDIARLEDEIDHLSSAADEELR--KNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG++ +P+I+    + F PESPR+L +   +E +A  +L +++  + +  EI  +    DE +R  + K V  L++F S                     I  V YYS  I + AG Q     +  ++     N + T+V ++L++  GR+ L +  L G+ +  V ++   I            ++ ++ + +Y+AFF  G GP+PW + +E++ +  R     ++   N  SN +V   F + A  +G
Sbjct:  187 LLGLTIIPAILQSAALPFCPESPRFLLINKKEEDQATEILQRLWGTSDVVQEIQEMK---DESVRMSQEKQVTVLELFRSPNYVQPLLISIVLQLSQQLSGINAVFYYSTGIFKDAGVQE---PIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMT---ISLLLKDDYEAMSFVCIVAILIYVAFFEIGPGPIPWFIVAELFSQGPRPAAIAVAGCCNWTSNFLVGMLFPSAAAYLG 428          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ERDL8_ARATH (Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.891e-19
Identity = 70/238 (29.41%), Postives = 114/238 (47.90%), Query Frame = 2
Query:   53 PSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIY----DIARLEDEI-DHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            P ++LF    F+PESPRWL M        + L K+     +I R   EI ++L+S A   L K      +D+   K IR                 I  V++Y+  I   AG      ++L S+      A+G  +   LID  GR+ L ++S  G++I  +L+  +F+         +   +A+ G+ +YI  F+ GMG +PW + SE++P   +G  GG+   VN +S+ +V+ TF
Sbjct:  196 PCVVLFFGTWFIPESPRWLEMVGRHSDFEIALQKLRGPQANITREAGEIQEYLASLA--HLPK---ATLMDLIDKKNIRFVIVGVGLMFFQQFVG-INGVIFYAQQIFVSAGASPTLGSILYSIEQVVLTALGATL---LIDRLGRRPLLMASAVGMLIGCLLIGNSFLLKAHGLALDIIPALAVSGVLVYIGSFSIGMGAIPWVIMSEIFPINLKGTAGGLVTVVNWLSSWLVSFTF 424          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GALP_ECOLI (Galactose-proton symporter OS=Escherichia coli (strain K12) GN=galP PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.346e-18
Identity = 70/256 (27.34%), Postives = 118/256 (46.09%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDI-ARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            WMLGV  +P+I+L + + F+P+SPRW         A  VL ++ D  A  + E+D +  +   +++++   ++ +   +   R                 +  +MYY+P I ++AG+ +    +  ++ V  TN + T + I L+D +GRK  L L  L       VL +   I            + A+  L ++I  FA   GP+ W L SE+ P + R      S   N I+N+IV  TFLT+   +G    F
Sbjct:  172 WMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESL--QVKQSGWALFKE---NSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQ----YFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTF 418          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GALP_ECOL6 (Galactose-proton symporter OS=Escherichia coli O6 GN=galP PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.346e-18
Identity = 70/256 (27.34%), Postives = 118/256 (46.09%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDI-ARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKK-LALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            WMLGV  +P+I+L + + F+P+SPRW         A  VL ++ D  A  + E+D +  +   +++++   ++ +   +   R                 +  +MYY+P I ++AG+ +    +  ++ V  TN + T + I L+D +GRK  L L  L       VL +   I            + A+  L ++I  FA   GP+ W L SE+ P + R      S   N I+N+IV  TFLT+   +G    F
Sbjct:  172 WMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTSAEAKRELDEIRESL--QVKQSGWALFKE---NSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPKIFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVLGTMMHIGIHSPSAQ----YFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTATNWIANMIVGATFLTMLNTLGNANTF 418          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.346e-18
Identity = 68/237 (28.69%), Postives = 108/237 (45.57%), Query Frame = 2
Query:   53 PSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIY----DIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            P I+L   + F+PESPRWL     +++  + L K+     DI    D I  +S  A E L K +    +   +SK+                   I  + +Y+      AGF S  L    ++A+A      T++G  LID  GR+ L + S  G+ +  +L   +F+             +A+ G+ +Y+A F+ GMGPVPW + SE++P   +GI G +   VN      V+ TF
Sbjct:  205 PCIVLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGKDADITNEADGIQ-VSIQALEILPKAR----IQDLVSKKYGRSVIIGVSLMVFQQFVGINGIGFYASETFVKAGFTSGKLG---TIAIACVQVPITVLGTILIDKSGRRPLIMISAGGIFLGCILTGTSFLLKGQSLLLEWVPSLAVGGVLIYVAAFSIGMGPVPWVIMSEIFPINVKGIAGSLVVLVNWSGAWAVSYTF 433          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
GTR2_CHICK2.077e-1926.48Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN2.712e-1926.91Solute carrier family 2, facilitated glucose trans... [more]
GTR1_RABIT4.626e-1927.71Solute carrier family 2, facilitated glucose trans... [more]
GTR3_RAT6.042e-1924.70Solute carrier family 2, facilitated glucose trans... [more]
GTR3_BOVIN6.042e-1926.34Solute carrier family 2, facilitated glucose trans... [more]
GTR3_MOUSE7.891e-1924.70Solute carrier family 2, facilitated glucose trans... [more]
ERDL8_ARATH7.891e-1929.41Sugar transporter ERD6-like 8 OS=Arabidopsis thali... [more]
GALP_ECOLI1.346e-1827.34Galactose-proton symporter OS=Escherichia coli (st... [more]
GALP_ECOL61.346e-1827.34Galactose-proton symporter OS=Escherichia coli O6 ... [more]
EDL16_ARATH1.346e-1828.69Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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