FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10428 contig Ccv1_Contig10428:1..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.666e-16
Identity = 68/254 (26.77%), Postives = 119/254 (46.85%), Query Frame = 2
Query:   11 VPGLCIWMLGVSAVPSIILFVLMLFMPESPRWLF---MTSDQEKAILVLSKIY-DIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF----IXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPT 748
            VP   + +LGV  +P  +L   + F+PESPRWL    +T D E ++ VL     DI    +EI    +++     K   V ++D+   +                    I  V++YS TI + AG  S+++A   +  V     V T +  +L+D  GR+ L + S  G+ ISLV+++ AF              +   ++++G+   +   + GMGP+PW + SE+ P   +G+ G ++  +N   + +V  T
Sbjct:  198 VPWRILAVLGV--LPCTLLIPGLFFIPESPRWLAKMGLTDDFETSLQVLRGFETDITVEVNEIKRSVASSS----KRSAVRFVDLK-RRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGVTSSNVA---TFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMT 441          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16
Identity = 66/257 (25.68%), Postives = 121/257 (47.08%), Query Frame = 2
Query:   59 IILFVLMLFMPESPRWLFMTSDQEKAI---LVLSKIYDIARLEDEIDHLSSAADEELRK----------NKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            +I+   M ++P SPRWL + + Q +     L  + I  + RL   +  ++ +A E++ +          +K   + ++F  K ++                   +V+YY+P+I+Q AGF +   A  +S+ +     V T V + +ID  GR+ L L  ++G++ISL LL   ++             +A+  L LY+  +    GP+ W + SE++P + RG    ++  VN  +N +V   F  + EL+G G  F
Sbjct:  222 VIMGTGMCWLPASPRWLLLRALQGQGNGENLQQAAIRSLCRLRGSV--IADSAAEQVNEILAELSLVGEDKEATFGELFRGKCLKALTIAGGLVLFQQITGQ-PSVLYYAPSILQTAGFSAAADATRISILLGLLKLVMTGVSVIVIDRVGRRPLLLCGVSGMVISLFLLGSYYMFYKNVPA------VAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILF 469          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: PLST3_ARATH (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.787e-16
Identity = 74/262 (28.24%), Postives = 115/262 (43.89%), Query Frame = 2
Query:   20 LCIWMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYD-------IARL--EDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGT 778
            +C W   +S VP+ +L V M    ESP+WLF      +A  V  K+         +A L   D  D   SA   EL   ++  +  VFI   +                  I  V Y+S T+ + AG  S       ++ V   N +G+ V + L+D  GRK L + S AG+ +SL L + A+             ++++ G+ L++  FA G GPVP  L SE+ P + R     +   V+ + N  V   FL + E +G+
Sbjct:  214 ICFW---ISTVPAAMLAVFMELCVESPQWLFKRGRAAEAEAVFEKLLGGSYVKAAMAELVKSDRGDDADSAKLSELLFGRS--FRVVFIGSTL----------FALQQLSGINAVFYFSSTVFKKAGVPSASA----NICVGVCNLLGSTVAVVLMDKLGRKVLLIGSFAGMAVSLGLQAIAYTSLPSPFGTL---FLSVGGMLLFVLSFATGAGPVPSLLLSEICPGRLRATALAVCLAVHWVINFFVGLLFLRMLEQLGS 453          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 60/246 (24.39%), Postives = 108/246 (43.90%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSW---AFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLT 757
            + LG +AVP++IL +   F+ E+P  L      EK   VL KI  I  +E E + +  A +   +      + ++F   E R                 I  VM+Y+P + Q  G   N  +L+ ++   G NA+ T++ + ++D  GR+ L +     +  + + +     A +             I LI + +Y++ FA   GP+ W + SE+YP + R      +  +N +   I+   FL+
Sbjct:  200 YSLGGAAVPALILLIGSFFIHETPASLIERGKDEKGKQVLRKIRGIEDIELEFNEIKYATEVATKVKSP--FKELFTKSENRPPLVCGTLLQFFQQFTGINVVMFYAPVLFQTMGSGDN-ASLISTVVTNGVNAIATVISLLVVDFAGRRCLLMEGALQMTATQMTIGGILLAHLKLVGPITGHAVPLIVLILICVYVSGFAWSWGPLGWLVPSEIYPLEVRNAGYFCAVAMNMVCTFIIGQFFLS 442          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL18_ARATH (Sugar transporter ERD6-like 18 OS=Arabidopsis thaliana GN=SFP2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 60/241 (24.90%), Postives = 114/241 (47.30%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIY----DIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            + A+P  I  + + F+PESPRWL      ++    L ++     DI+R   +I+ ++   + + + +    + D+F  ++ R                  + V+ Y+ TI++ AGF     + LL L +        ++G+ L+D +GR+ L L+S++G+ I+ +L+  AF          +      I + LYI  +A G+G +PW + SE++P   +   G +   V+  S+ IV   F
Sbjct:  192 LGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLLRLRGGNADISREASDIEVMTKMVENDSKSS----FCDLF-QRKYRYTLVVGIGLMLIQQFSGSSAVLSYASTILRKAGFSVTIGSTLLGLFMIPK----AMIGVILVDKWGRRPLLLTSVSGMCITSMLIGVAFTLQKMQLLPELTPVFTFICVTLYIGTYAIGLGGLPWVIMSEIFPMNIKVTAGSIVTLVSWSSSSIVTYAF 423          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.166e-16
Identity = 61/248 (24.60%), Postives = 112/248 (45.16%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGT-NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTV 760
            LG + VP++I+ +  L +P++P  +      E+A   L +I  +  +  E D L +A+ E          L   + ++ R                 I  +M+Y+P +    GF ++  A L+S  V G+ N   T+V IY +D +GR+ L L     ++I   +++        +          Y  + +  + +Y+A FA   GP+ W + SE++P + R     ++ +VN I   I+A  FLT+
Sbjct:  205 LGGAVVPALIITIGSLVLPDTPNSMIERGQHEEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNL---LRRKYRPHLTMAVMIPFFQQLTGINVIMFYAPVLFNTIGFTTD--ASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFGVDGTPGELPKWYAIVVVTFICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFIIAQIFLTM 447          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GLF_ZYMMO (Glucose facilitated diffusion protein OS=Zymomonas mobilis GN=glf PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.393e-15
Identity = 61/249 (24.50%), Postives = 110/249 (44.18%), Query Frame = 2
Query:   17 GLCIWMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNK--------TVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIV 739
            G C W      +  I   +L+L  P++P WL M     +A  +L+++   A     I  + +  D+ + K+         TV++  V ++                     I  V+YY+P + Q  GF ++  ALL ++++   N + T++   ++D FGRK L +    G+   + +L   F          V G + L  + LYIA F    GPV W + SE++P   +G    ++ T   ++N++V
Sbjct:  188 GWC-WSPASEGLIGIAFLLLLLTAPDTPHWLVMKGRHSEASKILARLEPQADPNLTIQKIKAGFDKAMDKSSAGLFAFGITVVFAGVSVAA--------------FQQLVGINAVLYYAPQMFQNLGFGAD-TALLQTISIGVVNFIFTMIASRVVDRFGRKPLLIWGALGMAAMMAVLGCCF-------WFKVGGVLPLASVLLYIAVFGMSWGPVCWVVLSEMFPSSIKGAAMPIAVTGQWLANILV 413          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL14_ARATH (Sugar transporter ERD6-like 14 OS=Arabidopsis thaliana GN=At4g04750 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.819e-15
Identity = 62/254 (24.41%), Postives = 107/254 (42.13%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDV-------FISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTG 781
            + ++PS+++  L+ F+PESPRWL     +++   VL        L      +S  A   L   K V   D+          ++                   +    +Y+ TI    G  S+   +L S+        G ++G+ L+D  GR+ L L S AG+ +  +  + +F              +ALI + +Y   +  GMGP+PW + SE+YP   +G  G +   V  IS+ +V  +F  + +   TG
Sbjct:  193 LGSIPSLVVLPLLFFIPESPRWLAKVGREKEVEGVLLS------LRGAKSDVSDEAATILEYTKHVEQQDIDSRGFFKLFQRKYALPLTIGVVLISMPQLGGLNGYTFYTDTIFTSTGVSSDIGFILTSIV----QMTGGVLGVLLVDISGRRSLLLFSQAGMFLGCLATAISFFLQKNNCWETGTPIMALISVMVYFGSYGLGMGPIPWIIASEIYPVDVKGAAGTVCNLVTSISSWLVTYSFNFLLQWSSTG 436          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL12_ARATH (Sugar transporter ERD6-like 12 OS=Arabidopsis thaliana GN=SUGTL5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.053e-15
Identity = 60/241 (24.90%), Postives = 104/241 (43.15%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKI----YDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            + ++P  I  + + F+PESPRWL      ++   VL K+    YDI     EI      + E  +KN  +    +F  K                       +  Y  T+ ++AGF +    ++LSL V   +    ++G+ L+D +GR+ L ++S  G+ +S + L+ AF          +      IG+  +   FA GMG +PW + SE++P   + + G +    N  +  I    F
Sbjct:  183 IGSIPCWIQVIGLFFIPESPRWLAKKGRDKECEEVLQKLRGRKYDIVPEACEI----KISVEASKKNSNINIRSLF-EKRYAHQLTIGIGLMLLQQLCGTAGISSYGSTLFKLAGFPARIGMMVLSLIVVPKS----LMGLILVDRWGRRPLLMTSALGLCLSCITLAVAFGVKDVPGIGKITPIFCFIGILSFTMMFAIGMGALPWIIMSEIFPMDIKVLAGSLVTIANWFTGWIANYAF 414          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STC_RICCO (Sugar carrier protein C OS=Ricinus communis GN=STC PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 56/246 (22.76%), Postives = 111/246 (45.12%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAG-TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF-----IXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFL 754
            LG + VP++I+ V  L +P++P  +      E+A   L ++  +  +++E   L  A+++  +       L   + ++ R                 I  +M+Y+P +    GF S+  A L+S  + G  N   T+V IY +D +GR+ L L     ++I   +++        +          Y  + ++ + +Y++ FA   GP+ W + SE++P + R     ++ +VN     +VA  FL
Sbjct:  207 LGGAMVPALIITVGSLVLPDTPNSMIERGQHEEARAHLKRVRGVEDVDEEFTDLVHASEDSKKVEHPWRNL---LQRKYRPHLSMAIAIPFFQQLTGINVIMFYAPVLFDTIGFGSD--AALMSAVITGLVNVFATMVSIYGVDKWGRRFLFLEGGVQMLICQAIVAACIGAKFGVDGAPGDLPQWYAVVVVLFICIYVSGFAWSWGPLGWLVPSEIFPLEIRSAAQSVNVSVNMFFTFVVAQVFL 447          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
ERDL4_ARATH3.666e-1626.77Sugar transporter ERD6-like 4 OS=Arabidopsis thali... [more]
XYLL1_ARATH4.787e-1625.68D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
PLST3_ARATH4.787e-1628.24Probable plastidic glucose transporter 3 OS=Arabid... [more]
STP2_ARATH6.252e-1624.39Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
EDL18_ARATH6.252e-1624.90Sugar transporter ERD6-like 18 OS=Arabidopsis thal... [more]
STP1_ARATH8.166e-1624.60Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
GLF_ZYMMO1.393e-1524.50Glucose facilitated diffusion protein OS=Zymomonas... [more]
EDL14_ARATH1.819e-1524.41Sugar transporter ERD6-like 14 OS=Arabidopsis thal... [more]
EDL12_ARATH4.053e-1524.90Sugar transporter ERD6-like 12 OS=Arabidopsis thal... [more]
STC_RICCO1.179e-1422.76Sugar carrier protein C OS=Ricinus communis GN=STC... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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