FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 63/247 (25.51%), Postives = 108/247 (43.72%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGT-NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYG----WIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTV 760
            LG + +P++IL    L + E+P  L   +  E+    L KI  +  + DE + +  A D   +       L   +    R                 I  +M+Y+P + Q  GF S+  A LLS  + G+ N + T VGIYL+D  GR+ L L S   ++I  +++    I           G     + +I + +Y+  FA   GP+ W + SE +P + R     ++ + N     ++A  FL++
Sbjct:  201 LGGAGIPAVILLFGSLLIIETPTSLIERNKNEEGKEALRKIRGVDDINDEYESIVHACDIASQVKDPYRKL---LKPASRPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSD--AALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLII--GIILAKDLGVTGTLGRPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRSAGFAVAVSCNMFFTFVIAQAFLSM 440          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 64/247 (25.91%), Postives = 116/247 (46.96%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMT-SDQE---KAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            + A+P  I  + + F+PESPRWL    SD+E       +  +  DI+R   EI  ++   + + + +    + D+F  ++ R                    V+ Y+ TI + AGF         S+A+ GT  +G       ++G+ L+D +GR+ L ++S  G+ ++ +LL  AF          +   ++ I + +YIA +A G+G +PW + SE++P   +   G +   V+  S+ IV   F
Sbjct:  188 LGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLFRLRGRDADISREASEIQVMTKMVENDSKSS----FSDLF-QRKYRYTLVVGIGLMLIQQFSGSAAVISYASTIFRKAGF---------SVAI-GTTMLGIFVIPKAMIGLILVDKWGRRPLLMTSAFGMSMTCMLLGVAFTLQKMQLLSELTPILSFICVMMYIATYAIGLGGLPWVIMSEIFPINIKVTAGSIVTLVSFSSSSIVTYAF 419          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: QUTD_EMENI (Quinate permease OS=Emericella nidulans GN=qutD PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.011e-14
Identity = 63/253 (24.90%), Postives = 111/253 (43.87%), Query Frame = 2
Query:   29 WML--GVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIAR----LEDEIDHLSSAADEELRKNKTVIYLD---VFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGI-YLIDHFGRKKLALSSLAGVIISLVLLS-WAFIXXXXXXXXXVY----GWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            W++   V  +P+ +L +  L + ESPRWLF+  ++EK I  L+ I ++      + +EI+ +  + +++  K     +      + +K I                  I  + YYSP + +  G    + +LL +       AV T V + YLIDHFGR+ L L   AG  + L ++  +  I               G  A+    L+ AF+ P     PW +NSE++    R +    +A  N + N +++
Sbjct:  190 WIIPFAVQLIPAGLLIIGALLIRESPRWLFLRGNREKGIETLAWIRNLPADHIYMVEEINMIEQSLEQQRVKIGLGFWKPFKAAWTNKRILYRLFLGSMLFLWQNGSGINAINYYSPRVFKSIGVSGGNTSLLTTGIFGVVKAVITFVWLLYLIDHFGRRNLLLVGAAGGSVCLWIVGGYIKIAKPENNPEGTQLDSGGIAAIFFFYLWTAFYTPSWNGTPWVINSEMFDPTVRSLAQACAAASNWLWNFLIS 442          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL11_ARATH (Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 59/244 (24.18%), Postives = 111/244 (45.49%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLF---MTSDQEKAILVL-SKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            M  + A+P I+  + + F+PESPRWL    ++ + E ++  L  K  D++    EI  ++   +E+ + +    + D+F  K+ R                  + + YYS  I + AGF     +++  + V        +VG+ L+D +GR+ L L+S  G+ I  +L+  +F          +      + + +Y   FA G+G +PW + SE++P   +   G + A  +  S   V+  F
Sbjct:  184 MAVIGAIPCILQTIGIFFIPESPRWLAKIRLSKEVESSLHRLRGKDTDVSGEAAEIQVMTKMLEEDSKSS----FSDMF-QKKYRRTLVVGIGLMLIQQLSGASGITYYSNAIFRKAGFSERLGSMIFGVFVIPK----ALVGLILVDRWGRRPLLLASAVGMSIGSLLIGVSFTLQQMNVLPELIPIFVFVNILVYFGCFAFGIGGLPWVIMSEIFPINIKVSAGTIVALTSWTSGWFVSYAF 418          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3 OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 5.852e-14
Identity = 66/268 (24.63%), Postives = 121/268 (45.15%), Query Frame = 2
Query:   29 WMLGVSAVPSIILFVLMLFMPESPRWLFMTSDQ---------EKAILVLSKI--------YDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS--WAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +M G     ++++ + M  +P SPRWL + + Q         EKA+L LSK+             ++D    + +A ++E        +L+VF    ++                   +V+YY+ +I+Q AGF +   A  +S+ +     + T V +  +D  GR+ L +  ++G+ +SL LLS  + F+          +  +A+  L LY+  +    GP+ W + SE++P + RG    ++   N  SN IV   F  + E +G
Sbjct:  263 YMYGFGTPVALLMGLGMWSLPASPRWLLLRAVQGKGQLQEYKEKAMLALSKLRGRPPGDKISEKLVDDAYLSVKTAYEDEKSGGN---FLEVFQGPNLKALTIGGGLVLFQQITGQ-PSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLLMTWVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAYYKFLGG--------FPLVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLG 518          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.643e-14
Identity = 57/241 (23.65%), Postives = 106/241 (43.98%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIY----DIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            + A+P  I  + + F+PESPRWL      ++    L ++     D++    EI  ++   +E+ + +    + D+F  K+ R                  + + YYS  I + AGF     +++  + V        +VG+ L+D +GR+ L L+S  G+ I  +L+  +F                 I + +Y  FFA G+G +PW + SE++P   +   G + A  +  +   V+  F
Sbjct:  178 IGALPCFIPVIGIYFIPESPRWLAKIGSVKEVENSLHRLRGKDADVSDEAAEIQVMTKMLEEDSKSS----FCDMF-QKKYRRTLVVGIGLMLIQQLSGASGITYYSNAIFRKAGFSERLGSMIFGVFVIPK----ALVGLILVDRWGRRPLLLASAVGMSIGSLLIGVSFTLQEMNLFPEFIPVFVFINILVYFGFFAIGIGGLPWIIMSEIFPINIKVSAGSIVALTSWTTGWFVSYGF 409          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 56/240 (23.33%), Postives = 110/240 (45.83%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTS-DQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGF-QSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXV--YGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            L  +A+P+ IL +  LF+PE+P  +  T+ D  K  L+L ++     ++DE+  L  A+      +   + L   + ++ R                 I  V +Y+P + +  GF +S  L   L   + GT++  T++ + ++D  GRK L L     +++S V +    +            YG+  ++ + +Y+A F    GP+ W + SE++P + R +   ++  V+ +    VA
Sbjct:  209 LATAAIPASILTLGSLFLPETPNSIIQTTGDVHKTELMLRRVRGTNDVQDELTDLVEASSGSDTDSNAFLKL---LQRKYRPELVMALVIPFFQQVTGINVVAFYAPVLYRTVGFGESGSLMSTLVTGIVGTSS--TLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVIVMVADVHDGVIKEGYGYAVVVLVCVYVAGFGWSWGPLGWLVPSEIFPLEIRSVAQSVTVAVSFVFTFAVA 443          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: HEX6_RICCO (Hexose carrier protein HEX6 OS=Ricinus communis GN=HEX6 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 60/247 (24.29%), Postives = 115/247 (46.56%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTS-DQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIY-LDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAG-TNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS--WAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTV 760
            L ++AVP+ IL    LF+PE+P  L   S D E+A L+L ++     ++ E+D L  A+      ++T+ +     + ++ R                 I  + +Y+P + +  G + +  A LLS  V G   +  T + + ++D  GR+ L +     + ++ +++    A            Y +I LI + +Y+A F    GP+ W + SE++P + R     +   V+ +   +VA TFL++
Sbjct:  204 LAMAAVPAAILTFGALFLPETPNSLIQRSNDHERAKLMLQRVRGTTDVQAELDDLIKASII----SRTIQHPFKNIMRRKYRPQLVMAVAIPFFQQVTGINVIAFYAPILFRTIGLEES--ASLLSSIVTGLVGSASTFISMLIVDKLGRRALFIFGGVQMFVAQIMVGSIMAAELGDHGGIGKGYAYIVLILICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSIVVAVSFLFTFVVAQTFLSM 444          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GTR14_HUMAN (Solute carrier family 2, facilitated glucose transporter member 14 OS=Homo sapiens GN=SLC2A14 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 53/249 (21.29%), Postives = 111/249 (44.58%), Query Frame = 2
Query:   32 MLGVSAVPSIILFVLMLFMPESPRWLFMT-SDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVG 775
            +LG + +P+I+    +   PESPR+L +    +E A  +L +++    +  +I  +   +   + + K V  L++F     R                 I  V YYS  I + AG Q     +  +++    N + T++ ++L++  GR+ L +  L G+     L++ + +            ++ +  + +++A F  G GP+PW + +E++ +  R     ++   N  SN +V   F + A  +G
Sbjct:  211 LLGFTILPAILQSAALPCCPESPRFLLINRKKEENATRILQRLWGTQDVSQDIQEMKDES-ARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQQ---PIYATISAGVVNTIFTLLSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKNHYNGM---SFVCIGAILVFVACFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAYYLG 452          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 53/245 (21.63%), Postives = 105/245 (42.86%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKI--------YDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTF 751
            +  +P ++  + +  +PESPRWL      E+  + L ++        Y+   ++D    L+  ++  +        +D+F   +                   +  + +Y+ +I + AG  S     +  +A+       T +G+ L+D  GR+ L L S  G  I   L+  +F             ++AL G+ +Y   F+ GMG +PW + SE++P   +G  G +   V+ + + I++ TF
Sbjct:  189 IGMIPCVVQMMGLFVIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSI--------VDLF-QPQYAKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAGVSSK----IGMIAMVVVQIPMTTLGVLLMDKSGRRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGIPWVIMSEIFPIDIKGSAGSLVTVVSWVGSWIISFTF 420          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
STP6_ARATH1.540e-1425.51Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
EDL17_ARATH1.540e-1425.91Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
QUTD_EMENI2.011e-1424.90Quinate permease OS=Emericella nidulans GN=qutD PE... [more]
EDL11_ARATH2.627e-1424.18Sugar transporter ERD6-like 11 OS=Arabidopsis thal... [more]
XYLL3_ARATH5.852e-1424.63D-xylose-proton symporter-like 3 OS=Arabidopsis th... [more]
EDL10_ARATH7.643e-1423.65Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
STP3_ARATH9.982e-1423.33Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
HEX6_RICCO9.982e-1424.29Hexose carrier protein HEX6 OS=Ricinus communis GN... [more]
GTR14_HUMAN9.982e-1421.29Solute carrier family 2, facilitated glucose trans... [more]
ERDL5_ARATH9.982e-1421.63Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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