FC876856

Overview
NameFC876856
Unique NameFC876856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length792
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.982e-14
Identity = 65/256 (25.39%), Postives = 108/256 (42.19%), Query Frame = 2
Query:   41 VSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAG------TNAV---GTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTG 781
            +  +PS+++  L+ F+PESPRWL     + +   VL        L  E   +S  A E L   + V        ++I                  I  V+   P +  + G+     ++ +S  V+       T+ V   G I+G  L+D  GR+ L L S AG+ +  +  + +F              +AL  + +Y   +  GMG +PW + SE+YP   +G  G M   V+ IS  +VA +F  + +   TG
Sbjct:  188 LGCIPSLMVLPLLFFIPESPRWLAKVGREMEVEAVLLS------LRGEKSDVSDEAAEILEYTEHVKQ-----QQDIDDRGFFKLFQRKYAFSLTIGVVLIALPQLGGLNGYSFYTDSIFISTGVSSDFGFISTSVVQMFGGILGTVLVDVSGRRTLLLVSQAGMFLGCLTTAISFFLKENHCWETGTPVLALFSVMVYFGSYGSGMGSIPWIIASEIYPVDVKGAAGTMCNLVSSISAWLVAYSFSYLLQWSSTG 432          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 63/249 (25.30%), Postives = 110/249 (44.18%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGT-NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXX------VYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTV 760
            LG++AVP++++ +    +P++P  +      E+A  +L KI     ++ E   L  A   E  K     + ++  SK  R                 I  +M+Y+P + +  GF  +  A L+S  + G  N + T V IY +D +GR+ L L     + I  +L+  +FI                  WI L  + +Y+A FA   GP+ W + SE+ P + R     ++ +VN     ++   FLT+
Sbjct:  206 LGLAAVPAVVMVIGSFILPDTPNSMLERGKNEEAKQMLKKIRGADNVDHEFQDLIDAV--EAAKKVENPWKNIMESK-YRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDD--AALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVG-SFIGARFGTSGTGTLTPATADWI-LAFICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTM 447          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 61/243 (25.10%), Postives = 111/243 (45.68%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAV-GTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW--IALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFL 754
            LG++A P++++ +   F+PE+P  L      E+   VL K+     +  E+  +  A+  EL  +    + ++ + K  R                 I ++++Y+P + Q  GF  N  A L S A+ G   V  T + I L+D  GR+ L ++    +II  V+++               G+  I +I + L++  F    GP+ WT+ SE++P + R     ++  VN +   I+A  FL
Sbjct:  207 LGLAAFPALLMTLGGYFLPETPNSLVERGLTERGRRVLVKLRGTENVNAELQDMVDAS--ELANSIKHPFRNI-LQKRHRPQLVMAICMPMFQILTGINSILFYAPVLFQTMGFGGN--ASLYSSALTGAVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFL 444          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: RGT2_YEAST (High-affinity glucose transporter RGT2 OS=Saccharomyces cerevisiae GN=RGT2 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.703e-13
Identity = 67/244 (27.46%), Postives = 108/244 (44.26%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIA----RLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXX----ITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            +G+  V S IL V M+F+PESPR+  +  +  KA   LS +  +     RL +E+  + +  D E     + + LD F + E R                     I  + YY        G  +++L   +S AV   N   +I G+YL+D  GR+ + L+   GVI+++  L  A +         V   I +  + L+IA F+   G V W +++E+YP   R  C  + A  N + N   A
Sbjct:  269 IGLQYVWSSILAVGMIFLPESPRYYVLKDELNKAAKSLSFLRGLPIEDPRLLEELVEIKATYDYEASFGPSTL-LDCFKTSENRPKQILRIFTGIAIQAFQQASGINFIFYYGVNFFNNTGVDNSYLVSFISYAV---NVAFSIPGMYLVDRIGRRPVLLAG--GVIMAIANLVIAIVGVSEGKTV-VASKIMIAFICLFIAAFSATWGGVVWVVSAELYPLGVRSKCTAICAAANWLVNFTCA 505          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.793e-13
Identity = 61/255 (23.92%), Postives = 111/255 (43.53%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGT-NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXV--YGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGAPF 790
            LG + +P++IL    L + E+P  L   +  ++    L KI  +  +++E + +  A D   +       L   +    R                 I  +M+Y+P + Q  GF ++  A LLS  V GT N + T VGI+L+D  GR+ L L S   ++I  +++                    + +I + +Y+  FA   GP+ W + SE +P + R     ++ + N     ++A  FL++   + +G  F
Sbjct:  202 LGGAGIPALILLFGSLLICETPTSLIERNKTKEGKETLKKIRGVEDVDEEYESIVHACDIARQVKDPYTKL---MKPASRPPFVIGMLLQFFQQFTGINAIMFYAPVLFQTVGFGND--AALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIILAKDLDVTGTLARPQALVVVIFVCVYVMGFAWSWGPLGWLIPSETFPLETRTEGFALAVSCNMFFTFVIAQAFLSMLCAMKSGIFF 451          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP4_ARATH (Sugar transport protein 4 OS=Arabidopsis thaliana GN=STP4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 62/249 (24.90%), Postives = 110/249 (44.18%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGT-NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW------IALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTV 760
            LG++ VP++++ +  L +P++P  L      E+A  +L  I     +++E   L  A++E   K     + ++ + +  R                 I  + +Y+P + Q  GF S   A LLS  V G    + T V ++ +D FGR+ L L     +++S + +                G       +ALI   +Y+A FA   GP+ W + SE+ P + R     ++ +VN     +VA  FLT+
Sbjct:  204 LGLACVPAVMIMIGALILPDTPNSLIERGYTEEAKEMLQSIRGTNEVDEEFQDLIDASEES--KQVKHPWKNIMLPR-YRPQLIMTCFIPFFQQLTGINVITFYAPVLFQTLGFGSK--ASLLSAMVTGIIELLCTFVSVFTVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGVAGTGNIGKSDANLIVALI--CIYVAGFAWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTM 445          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: STP13_ARATH (Sugar transport protein 13 OS=Arabidopsis thaliana GN=STP13 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.470e-13
Identity = 60/246 (24.39%), Postives = 109/246 (44.31%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGT-NAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAF---IXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTV 760
            LG++ +P+++L V  L + E+P  L      ++   VL +I     +E E   L  A+   L K     + ++ + +  R                 I  +M+Y+P +    GF S+  A L S  V G  N + T+V IY +D  GR+ L L +   +  S V+++      +          +  + ++ +  Y+A FA   GP+ W + SE +P + R     ++  VN +   I+A  FL++
Sbjct:  206 LGLAGIPALLLTVGALLVTETPNSLVERGRLDEGKAVLRRIRGTDNVEPEFADLLEAS--RLAKEVKHPFRNL-LQRRNRPQLVIAVALQIFQQCTGINAIMFYAPVLFSTLGFGSD--ASLYSAVVTGAVNVLSTLVSIYSVDKVGRRVLLLEAGVQMFFSQVVIAIILGVKVTDTSTNLSKGFAILVVVMICTYVAAFAWSWGPLGWLIPSETFPLETRSAGQSVTVCVNLLFTFIIAQAFLSM 446          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: SNF3_YEAST (High-affinity glucose transporter SNF3 OS=Saccharomyces cerevisiae GN=SNF3 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 66/259 (25.48%), Postives = 114/259 (44.02%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLS-----KIYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXX----ITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVAPTFLTVAELVGTGA 784
            +G+  V S  L + M F+PESPR+  +    ++A   LS      ++D   LE+ ++ + +  D E     +  ++D FIS + R                     I  + YY        G  +++L   ++ AV   N V  + G++ ++ FGR+K+ +  + GVI+++     A +             IA I   L+IA F+   G V W +++E+YP   R  C  + A  N + N I A   L    +V TG+
Sbjct:  267 IGLQYVWSSFLAIGMFFLPESPRYYVLKDKLDEAAKSLSFLRGVPVHDSGLLEELVE-IKATYDYEASFGSSN-FIDCFISSKSRPKQTLRMFTGIALQAFQQFSGINFIFYYGVNFFNKTGVSNSYLVSFITYAV---NVVFNVPGLFFVEFFGRRKVLV--VGGVIMTIANFIVAIVGCSLKTVAAAKVMIAFI--CLFIAAFSATWGGVVWVISAELYPLGVRSKCTAICAAANWLVNFICA---LITPYIVDTGS 513          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: GHT2_SCHPO (High-affinity glucose transporter ght2 OS=Schizosaccharomyces pombe GN=ght2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.104e-12
Identity = 62/250 (24.80%), Postives = 108/250 (43.20%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSK----IYDIARLEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVY----------GWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            +G++ +  II  + +LF+PESPR+L      E+A+ VLS+      D   +++E   L S+ DEE        +  +F  K+IR                      YY  +++Q AG  S +L+ ++  AV   N   T  G+Y+++ FGR+         +II  +  S  F          +Y          G + ++   L+I  FA    P  + +  E YP +YR  C  ++   N + N +++
Sbjct:  186 IGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPDSEEVQNEYHRLKSSIDEEF-AGGPCSWASIF-GKDIRYRTFLGMFVMSLQQLTGNNYFFYYGFSVMQGAGINSPYLSAMILDAV---NFGCTFGGMYVLERFGRRN-------PLIIGGIWQSICFFIYSAVGSRALYHKNGTSNTRAGAVMIVMACLFIFGFAQTWAPAAYVIVGESYPVRYRSKCAAVATASNWLWNFLIS 423          
BLAST of FC876856 vs. ExPASy Swiss-Prot
Match: RCO3_NEUCR (Probable glucose transporter rco-3 OS=Neurospora crassa GN=rco-3 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12
Identity = 56/240 (23.33%), Postives = 103/240 (42.92%), Query Frame = 2
Query:   35 LGVSAVPSIILFVLMLFMPESPRWLFMTSDQEKAILVLSKI--YDIAR--LEDEIDHLSSAADEELRKNKTVIYLDVFISKEIRXXXXXXXXXXXXXXXXXITTVMYYSPTIVQMAGFQSNHLALLLSLAVAGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIALIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNCISNLIVA 742
            +G+    + +L + +  +PE+PR+L    D+  A L LS++   DI    L +E+  + +    E+          +F    +                  +  +MYY  T    AG  +      +SL +   N   TI G+++++ +GR++L +    G+ I  +L++ AF              + +  +A+YI FFA   GPV W + SE+YP + R     ++   N   N  +A
Sbjct:  196 IGLQLTWACVLALGLTVLPETPRYLIKRGDKNAAALSLSRLRRLDITHPALVEELAEIEANHQYEMALGPDSYKDILFGEPHLGRRTFTGCCLQMLQQLTGVNFIMYYGTTFFNNAGVGN---PFKISLIMQVINTASTIPGLFVVESWGRRRLLMVGAIGMAICQLLIA-AFATASGSNNLSAQNKVLITFVAIYIFFFAASWGPVVWVVTSEIYPLKVRAKSMSITTASNWFLNFGIA 431          
The following BLAST results are available for this feature:
BLAST of FC876856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
EDL15_ARATH9.982e-1425.39Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
STP10_ARATH1.304e-1325.30Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP7_ARATH1.703e-1325.10Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
RGT2_YEAST1.703e-1327.46High-affinity glucose transporter RGT2 OS=Saccharo... [more]
STP8_ARATH3.793e-1323.92Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
STP4_ARATH6.470e-1324.90Sugar transport protein 4 OS=Arabidopsis thaliana ... [more]
STP13_ARATH6.470e-1324.39Sugar transport protein 13 OS=Arabidopsis thaliana... [more]
SNF3_YEAST1.104e-1225.48High-affinity glucose transporter SNF3 OS=Saccharo... [more]
GHT2_SCHPO1.104e-1224.80High-affinity glucose transporter ght2 OS=Schizosa... [more]
RCO3_NEUCR1.883e-1223.33Probable glucose transporter rco-3 OS=Neurospora c... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF01RM1 EHR Citrus clementina cDNA clone KN0AAN1CF01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876856 ID=FC876856; Name=FC876856; organism=Citrus clementina; type=EST; length=792bp
TGCACGAGGGGTCCCCGGACTATGCATATGGATGCTTGGAGTATCAGCTG
TGCCATCTATCATTCTTTTTGTCTTAATGCTTTTTATGCCGGAGTCTCCT
AGATGGCTTTTCATGACCAGTGACCAAGAAAAAGCCATTTTGGTTCTTTC
TAAGATTTATGACATTGCTCGGTTAGAAGATGAAATTGATCACCTTTCAT
CTGCTGCAGATGAAGAACTCCGAAAAAATAAAACTGTCATATACTTGGAT
GTTTTTATATCCAAAGAAATCAGACTTGCATTTCTGGCTGGGGCTGGACT
TCAGGCATTTCAGCAGTTCACTGGTATCACCACAGTCATGTACTACAGCC
CGACAATTGTCCAAATGGCTGGCTTCCAGTCCAACCACCTAGCGCTTCTC
CTATCTCTTGCTGTTGCTGGTACAAATGCAGTTGGCACAATTGTTGGAAT
TTATCTTATTGACCATTTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAG
CTGGTGTTATTATATCCCTCGTCTTACTCTCTTGGGCATTCATCAGTGGA
TCATCTGCTTCTTCAAGTGGAGTCTATGGTTGGATTGCACTCATCGGGTT
AGCCCTATATATTGCTTTCTTTGCACCTGGAATGGGACCTGTGCCATGGA
CTCTGAACTCTGAGGTGTATCCTGAGCAATACCGTGGAATTTGTGGAGGT
ATGTCAGCTACTGTGAACTGCATCTCAAATTTGATCGTGGCCCCCACCTT
CCTGACGGTTGCTGAACTAGTGGGCACTGGAGCCCCTTTCTT
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