FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11
Identity = 61/199 (30.65%), Postives = 91/199 (45.73%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYA----------QKRLHANVISAGL-PRFRKTDESLLQESVSGGWQDGATAVCIWI--LGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK---KFG-----VVATPDI--HSFEVTERDHFIILRCDGLW 801
            A + I+DGHGG   AE+           Q+   + ++   L   F  TD  LL++        G TA  I +  L + +  AN GD++ V++      G N+            ++ +HK     E++RI  + G V  + R+ G L +SRA GD +FK   K G     V   PDI  H+    E D F+IL CDG+W
Sbjct:   56 AFYGIFDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDVELLKDEKLKDDHSGCTATVILVSQLKKLLICANSGDSRTVLST-----GGNSK----------AMSFDHKPTLLSEKSRIVAADGFVEMD-RVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDE-DEFVILACDGIW 237          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11
Identity = 57/195 (29.23%), Postives = 88/195 (45.13%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANV-----ISAG---LPRFRKTDESLLQESVSG---------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS---SNGRL-QGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            FAI+DGH G  AAE++ + L   V      SAG      F +TD +  QE  S           W  G TA+   ++   +FVAN+GD++A++ R+                    +++ H A    ER R+   GG +       R+    L+V+R+ GD   K   V A P+I    ++  D F+++  DGLW
Sbjct:  424 FAIFDGHRGAAAAEFSAQVLPGLVQSLCSTSAGEALSQAFVRTDLAFRQELDSHRQSKRVSQKDWHPGCTAIASLLVENKLFVANVGDSRAILCRAG---------------HPFALSKAHLATCIDERNRVIGEGGRIEWLVDTWRVAPAGLQVTRSIGDDDLKP-AVTAEPEISETILSADDEFLVMASDGLW 602          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C34_ARATH (Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11
Identity = 48/139 (34.53%), Postives = 69/139 (49.64%), Query Frame = 1
Query:  421 WQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQG------------RLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            +  G TA+ I   G  +++AN+GD++AV+A  S         DE  SL A+ +T + K   PQE  RI    G V       G             L +SRAFGD   K +G+V+ P++    ++ RD FIIL  DG+W
Sbjct:  169 FNSGTTALTIVRQGDVIYIANVGDSRAVLATVS---------DE-GSLVAVQLTVDFKPNLPQEEERIIGCNGRVFCLQDEPGVHRVWQPVDESPGLAMSRAFGDYCIKDYGLVSVPEVTQRHISIRDQFIILATDGVW 297          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11
Identity = 51/171 (29.82%), Postives = 80/171 (46.78%), Query Frame = 1
Query:  328 QKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-------------NGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            Q  L   +  + L  F+  D  L        +  G TAV +   G+ + V N+GD++AV+             D  ++L A+ +T + K   P E  RI+K  G V +             N    G L ++RAFGD   K FG+++ PD+   ++TE+D FI+L  DG+W
Sbjct:  182 QPELFQTLKESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAVMGTR----------DSENTLVAVQLTVDLKPNLPAEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPG-LAMARAFGDFCLKDFGLISVPDVSFRQLTEKDEFIVLATDGIW 341          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: CYAA_USTMA (Adenylate cyclase OS=Ustilago maydis GN=UAC1 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.123e-11
Identity = 51/183 (27.87%), Postives = 89/183 (48.63%), Query Frame = 1
Query:  256 PPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFGVV-ATPDIHSFEVTERDHFIILRCDGLW 801
            P  LR A   +   +   L  + ++K   A+   A     R +  ++   S    W+ GA+A+  +++  T+++AN GDA AV++R    +G   HL          ++ +H+     E  RI+ + G VS  G +   L+VSR+FG   F  F +V A P + + ++T+ D F+I+    LW
Sbjct: 1789 PDALRRAFLRLQKDYADALINDGSRKLSEAHA-EAAADVTRSSAPAIAAASNKHDWRAGASAILAYVVDHTLYIANAGDALAVMSR----NGGTAHL----------ISNKHEPFDRAEIERIRSAEGWVSLRGYVNDMLDVSRSFG--YFHLFPIVNAAPAVTTVQLTDSDEFVIIANRTLW 1954          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PP2C3_YEAST6.220e-1130.65Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
P2C31_ARATH6.220e-1129.23Protein kinase and PP2C-like domain-containing pro... [more]
P2C34_ARATH8.123e-1134.53Probable protein phosphatase 2C 34 OS=Arabidopsis ... [more]
P2C33_ARATH8.123e-1129.82Probable protein phosphatase 2C 33 OS=Arabidopsis ... [more]
CYAA_USTMA8.123e-1127.87Adenylate cyclase OS=Ustilago maydis GN=UAC1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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