FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.080e-18
Identity = 76/261 (29.12%), Postives = 115/261 (44.06%), Query Frame = 1
Query:   85 KSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNL----RCAHFAIYDGHGGRLAAEYAQKRLHANVIS-AGLPR---------FRKTDESLLQE-SVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKF-------GVVATPDIHSFEVTERDHFIILRCDGLW 801
            KS  EK  EN +  A   +         + +    D GSRHTME                       A + ++DGHGG+ AA++    L   ++     PR         F +TD +     SV+     G TA+   ++GR++ VAN GD +AV+                   KAI ++R+HK    +E+ RI+ SGG V  +G L G+L V+RA GD   +          + A P++    +TE D F+I+ CDG+W
Sbjct:   47 KSGTEKTFENMDAVAYMPV---------VRSGGWADIGSRHTMEDVFICSDNLMKEFGVESFEDGPSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPREIEKALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRG---------------KAIEMSRDHKPSCNREKVRIEASGGYV-YDGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRNLTEEDEFLIIGCDGIW 282          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: SPNA_DICDI (Protein spalten OS=Dictyostelium discoideum GN=spnA PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.861e-18
Identity = 57/196 (29.08%), Postives = 107/196 (54.59%), Query Frame = 1
Query:  256 PPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAGLPR-----------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK---KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            P ++  +++A+YDGHGG   +   +  +H  ++++   R           + + D+ ++++      + G+T V   ++G  ++ AN+GD++ V+AR+      N +     + + ++++ +H A   QE+ R+   GG +  N RL G L VSR+FGD+++K   K   V+ P   + ++T RDHF IL CDGLW
Sbjct:  737 PKDIPISYYAVYDGHGGTETSTLLEPTVHNCLVNSQSFRDGDYEQAFRDAYAEADDIVIEKCE----KSGSTGVSALLVGNKLYTANVGDSEIVLARAQ----PNANPKGPVTYEPVLLSYKHLASDDQEKKRVTDLGGMIIFN-RLFGSLAVSRSFGDKEYKEGEKKFCVSDPYQTTTDLTARDHFFILACDGLW 923          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.170e-17
Identity = 62/196 (31.63%), Postives = 94/196 (47.96%), Query Frame = 1
Query:  262 NLRCAHFAIYDGHGGRLAAEYAQKRLHANV-------------ISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSN---GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            N + + F +YDGHGG  AAE+  + LH  V             + A    F +TD   L++ V      GA  V   I  + + V+N+GD +AV+ R+ + +                +T +HK     E+ RI+  GG V ++    R+QG L VSR+ GD   KK+ VVA P+    E+ +   F++L  DGLW
Sbjct:  146 NSKKSFFGVYDGHGGAKAAEFVAENLHKYVVEMMENCKGKEEKVEAFKAAFLRTDRDFLEKGV----VSGACCVTAVIQDQEMIVSNLGDCRAVLCRAGVAE---------------ALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKW-VVAEPETRVLELEQDMEFLVLASDGLW 321          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1F_MOUSE (Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.405e-17
Identity = 63/188 (33.51%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANV----------ISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS--SNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A+FA++DGHGG  AA YA   +H N            +A    FR TDE  LQ++     Q G T VC  I G  + VA +GD++ ++ +                 + + +   HK     E+ARI+  GG VS     R+ G L VSRA GD  F+K  V    D  S E+T  + +++L CDG +
Sbjct:  189 AYFAVFDGHGGVDAARYASVHVHTNASHQPELRTNPAAALKEAFRLTDEMFLQKAKRERLQSGTTGVCALIAGAALHVAWLGDSQVILVQQG---------------RVVKLMEPHKPERQDEKARIEALGGFVSLMDCWRVNGTLAVSRAIGD-VFQKPYVSGEADAASRELTGSEDYLLLACDGFF 360          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.405e-17
Identity = 61/191 (31.94%), Postives = 94/191 (49.21%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG-----VVATPDIHSFEVTERDHFIILRCDGLW 801
            A + ++DGHGG  AA + +K +   V+           A    F KTD +L   S S     G TA+   IL +T+ +AN GD++AV+ +                 +AI ++++HK     ER RI+K GG +  +G L G+L V+RA GD   K        +   P++    +TE D ++I+ CDGLW
Sbjct:  105 AFYGVFDGHGGVDAASFTKKNIMKLVMEDKHFPTSTKKATRSAFVKTDHALADAS-SLDRSSGTTALTALILDKTMLIANAGDSRAVLGKRG---------------RAIELSKDHKPNCTSERLRIEKLGGVIY-DGYLNGQLSVARALGDWHIKGTKGSLCPLSCEPELEEIVLTEEDEYLIMGCDGLW 278          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.808e-17
Identity = 64/206 (31.07%), Postives = 99/206 (48.06%), Query Frame = 1
Query:  256 PPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQD----------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            P + +CA FA+YDGHGG   ++Y+   LH  V++      ++  E  ++E++  G+ +                G TAV + I    V+  N GD++AV   SS+V             +A  ++ +HK  +  E  RI  +GG V  N R+ G L +SRA GD  FK           V A PD+ + ++T    FI+L CDG+W
Sbjct:   47 PDDPKCAFFAVYDGHGGSKVSQYSGINLHKKVVAQ-----KEFSEGNMKEAIEKGFLELDQQMRVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAV---SSVVG------------EARPLSFDHKPSHETEARRIIAAGGWVEFN-RVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDVITDKLTPDHEFIVLACDGIW 231          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C74_ORYSJ (Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.808e-17
Identity = 76/268 (28.36%), Postives = 118/268 (44.03%), Query Frame = 1
Query:   76 IAKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADA---AEDKGSRHTMEXXXXXXXXXXXXXPPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAG------------------LPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS--SNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERD-HFIILRCDGLW 801
            +A  + ++   E EEE A           +E+E +    A  +G RH ME               + + A + +YDGHGGR A ++   RL  NV++A                       R    +   E +S G + GA A    ++   ++VAN+GD +AV++R                  A  +T +H      ER+RI+ SGG VS  SNG  R+Q  L V+R+FGD   K++ VVA P++    +      F+++  DGLW
Sbjct:  109 MAAAAAVKAAKEKEEEEA-----------MEVEGEGFWVASRRGLRHAMEDGYGVITHKIEG---HSQMAFYGVYDGHGGRAAVDFVAGRLGNNVVAAAEKQRLSEKASSPAAADHVAAAIRAAYLATDSEFLSQGTRGGACAATALVIDGDLYVANLGDCRAVISRHG---------------AAAALTSDHTPARDDERSRIESSGGYVSCGSNGVWRVQDCLAVTRSFGDGGLKRW-VVAEPEVSRTPLAGAGCEFLVIASDGLW 346          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C3_SCHPO (Protein phosphatase 2C homolog 3 OS=Schizosaccharomyces pombe GN=ptc3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17
Identity = 58/192 (30.21%), Postives = 89/192 (46.35%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRL-----------HANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG-------VVATPDIHSFEVTERDHFIILRCDGLW 801
            FA+YDGHGG   A++    L             + ++A    F   D+++L +        G TA  +  +G  ++ AN GD++ V+    I               A  ++ +HK     E+ARI  +GG V   GR+ G L +SRA GD +FK          V A PD+   E+T+ D F++L CDG+W
Sbjct:   58 FAVYDGHGGDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILDDDQFHTDPSGCTATVVLRVGNKLYCANAGDSRTVLGSKGI---------------AKPLSADHKPSNEAEKARICAAGGFVDF-GRVNGNLALSRAIGDFEFKNSNLEPEKQIVTALPDVVVHEITDDDEFVVLACDGIW 233          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17
Identity = 61/204 (29.90%), Postives = 103/204 (50.49%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS-----------AGLPRFRKTDESLL-----------QESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            F ++DGHGGR  A++ +K     ++            A    F K DE LL           + + +     G TA    I   T++VAN GD+++V+ R++      NH           ++ +HK   P+E++RI+++GG VS +GR+ G L +SRA GD ++K+          ++A PD+   E+T +D FI++ CDG++
Sbjct:   53 FGVFDGHGGREVAQFVEKHFVDELLKNKNFKEQKFEEALKETFLKMDELLLTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRSVLCRNN-----TNH----------DMSVDHKPDNPEEKSRIERAGGFVS-DGRVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVF 240          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17
Identity = 58/200 (29.00%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKR-------------------LHANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK-----KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A +A++DGHGG  AA Y ++                    ++   +   L       +  L E  S     G TA+   I GR + VAN GD +AV+ R                 +AI ++ +HK I   ER R+++SGG ++++G L   L V+RA GD   K     +  +++ P+I    +TE D F+++ CDG+W
Sbjct:  116 AFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQADLALAEDCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKG---------------RAIDMSEDHKPINLLERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPHGSQSPLISEPEIKQITLTEDDEFLVIGCDGIW 300          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
P2C57_ORYSJ3.080e-1829.12Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
SPNA_DICDI6.861e-1829.08Protein spalten OS=Dictyostelium discoideum GN=spn... [more]
P2C14_ARATH1.170e-1731.63Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
PPM1F_MOUSE3.405e-1733.51Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE... [more]
P2C47_ARATH3.405e-1731.94Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
PP2C2_CAEEL5.808e-1731.07Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
P2C74_ORYSJ5.808e-1728.36Probable protein phosphatase 2C 74 OS=Oryza sativa... [more]
PP2C3_SCHPO9.907e-1730.21Protein phosphatase 2C homolog 3 OS=Schizosaccharo... [more]
PP2C1_PARTE9.907e-1729.90Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
P2C49_ARATH9.907e-1729.00Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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