FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17
Identity = 60/192 (31.25%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGW-------------QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGG---TVSSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A F +YDGHGG  AAE+A K L +N++   +      +ES ++E+V  G+             + G+  V   I    + VAN GD +AV++     +                +T +H+     ER RI+ SGG   T +S  R+QG L VSR  GD   K++ +++ P+I+   +  +  F+IL  DGLW
Sbjct:  152 AIFGVYDGHGGPTAAEFAAKNLCSNILGEIV---GGRNESKIEEAVKRGYLATDSEFLKEKNVKGGSCCVTALISDGNLVVANAGDCRAVLSVGGFAE---------------ALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQW-IISEPEINILRINPQHEFLILASDGLW 324          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK-----KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A + ++DGHGG  AA + +K +   ++           A    F K D     +S S     G TA+  +I GR + +AN GD +AV+ R                 +AI ++++HK     E+ RI+K GG V  +G L G+L V+RA GD   K        +   P++   +++E D F+I+ CDGLW
Sbjct:  122 AFYGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFADDS-SLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRG---------------RAIELSKDHKPNCTAEKVRIEKLGGVV-YDGYLNGQLSVARAIGDWHMKGPKGSACPLSPEPELQETDLSEDDEFLIMGCDGLW 295          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16
Identity = 61/188 (32.45%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANV----------ISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS--SNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A+FA++DGHGG  AA YA   +H N            +A    FR TD+  LQ++     Q G T VC  I G  + VA +GD++ ++ +                 + + +   HK     E++RI+  GG VS     R+ G L VSRA GD  F+K  V    D  S E+T  + +++L CDG +
Sbjct:  188 AYFAVFDGHGGVDAARYASVHVHTNASHQPELLTDPAAALKEAFRHTDQMFLQKAKRERLQSGTTGVCALITGAALHVAWLGDSQVILVQQG---------------QVVKLMEPHKPERQDEKSRIEALGGFVSLMDCWRVNGTLAVSRAIGD-VFQKPYVSGEADAASRELTGLEDYLLLACDGFF 359          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C02_ORYSJ (Probable protein phosphatase 2C 2 OS=Oryza sativa subsp. japonica GN=Os01g0295700 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.207e-16
Identity = 66/239 (27.62%), Postives = 102/239 (42.68%), Query Frame = 1
Query:  169 IEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNLRC----AHFAIYDGHGGRLAAEYAQKR-LHANVISAGLPRFRKTDESL------------------LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK-----KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            I + +  D G R  ME                L C    A + ++DGHGG  AA Y ++  +      +  P+  + DES                   L + ++     G TA+   I GR + VAN GD +AV+ R  +               A+ ++R+H+  Y  E  RI + GG +  +G L G L V+RA GD   K     +  ++A P+     +TE D F+I+ CDG+W
Sbjct:   68 IRSGSFADIGPRRYMEDEHIRIDDLSGHLGSLLMCPAPNAFYGVFDGHGGPDAAAYMKRHAIRLFFEDSEFPQALEEDESFYESVEKSIHNAFLSADLALADDLAISRSSGTTALAALIFGRQLLVANAGDCRAVLCRKGV---------------AVEMSRDHRPTYDAEHERITECGGYIE-DGYLNGVLSVTRALGDWDMKMPQGSRSPLIAEPEFQQTTLTEDDEFLIIGCDGIW 290          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 60/188 (31.91%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A+FA++DGHGG  AA YA   +H N             A    FR+TD+  L+++     Q G T VC  I G T+ VA +GD++ ++ +                 + + +   H+     E+ARI+  GG VS     R+ G L VSRA GD  F+K  V    D  S  +T  + +++L CDG +
Sbjct:  192 AYFAVFDGHGGVDAARYAAVHVHTNAARQPELPTDPEGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQG---------------QVVKLMEPHRPERQDEKARIEALGGFVSHMDCWRVNGTLAVSRAIGD-VFQKPYVSGEADAASRALTGSEDYLLLACDGFF 363          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.765e-16
Identity = 70/258 (27.13%), Postives = 109/258 (42.25%), Query Frame = 1
Query:  115 EEEAARAQIMHKQIDFV-EIEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNLRC----AHFAIYDGHGGRLAAEYAQKRLHANVIS-AGLPRFRKTDESLLQ------------------ESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK-----FGVVATPDIHSFEVTERDHFIILRCDGLW 801
            E  A    I    + FV  I + +  D G R  ME                L C    A + ++DGHGG  AA Y ++     +   +  P+  + DE+ +Q                  + +      G TA+   + GR + VAN GD +AV+ R  +               A+ ++R+H+A Y +E  R+  SGG +  +G L G L V+RA GD   K        ++A P+     +TE D F+I+ CDG+W
Sbjct:   56 ESAAGAPSISVDALQFVPSIRSGSFADIGPRRYMEDEHIRIDDLSAHLGSLLVCPLPSAFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQADLALADDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGV---------------AMEMSRDHRANYAEECERVAASGGYIE-DGYLNGVLSVTRALGDWDMKMPDGSISPLIAEPEFRQTMLTEDDEFLIMGCDGIW 297          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.917e-16
Identity = 62/189 (32.80%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAG----------LPRFRKTDESLLQESVSGGWQDGATAV-CIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSN----GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            FAIYDGH G     Y QK L +N++             +  + KTD+++L  S   G + G+TAV  I + GR ++VAN+GD++AV+++                 +AI +T +H+     ER  I+  GG VS+      R+ G+L VSRAFGD+  K   + + PD+    + +    ++L  DGLW
Sbjct:   67 FAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLG-RGGSTAVTAILMNGRRLWVANVGDSRAVLSQGG---------------QAIQMTIDHEP--HTERLSIEGKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKTH-LRSDPDVKDSSIDDHTDVLVLASDGLW 236          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 62/192 (32.29%), Postives = 93/192 (48.44%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGW-------------QDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-NG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A F +YDGHGG  AAE+A K L  N++   +    K DES + E+V  G+             + G+  V   +    + V+N GD +AV++   +               A  ++ +H+     ER RI+ +GG V + +G  R+QG L VSR  GD Q KK+ V+A P+     +     F+IL  DGLW
Sbjct:  169 AIFGVYDGHGGVKAAEFAAKNLDKNIVEEVV---GKRDESEIAEAVKHGYLATDASFLKEEDVKGGSCCVTALVNEGNLVVSNAGDCRAVMSVGGV---------------AKALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKW-VIAEPETKISRIEHDHEFLILASDGLW 341          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 63/243 (25.93%), Postives = 105/243 (43.21%), Query Frame = 1
Query:  268 RCAHFAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESL------LQESVSG--GWQD-------------------------------------------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            + + F +YDGHGG++ A++  K LH  VIS    +    + SL      + + + G  GW++                                                 G TA    I  + +FVAN GD++ V++R S               +A  ++++HK     E+ RI K+GG + + GR+ G L ++RA GD +FK        K  V A PDI++ ++ + D F+++ CDG+W
Sbjct:   49 KTSFFGVYDGHGGKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDKMNKFSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALIKDKKLFVANAGDSRCVISRKS---------------QAYNLSKDHKPDLEVEKERILKAGGFIHA-GRINGSLNLTRAIGDMEFKQNKFLPSEKQMVTADPDINTIDLCDDDDFLVVACDGIW 275          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16
Identity = 66/190 (34.74%), Postives = 97/190 (51.05%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGL----PR------FRKTDESLLQESVSGGWQDGATAV-CIWILGRTVFVANIGDAKAVVAR-SSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS----NGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            FAIYDGH G     Y QKRL +N++  G     PR      + KTD+++L  S   G + G+TAV  I I GR +++AN+GD++AV++   +I   S +H                      ER+ I+  GG VS+      R+ G+L VSRAFGD+  K   + + PDI    V  +   ++L  DG+W
Sbjct:   66 FAIYDGHMGDSVPAYLQKRLFSNILKEGEFWVDPRRSIAKAYEKTDQAILSNSSDLG-RGGSTAVTAILINGRKLWIANVGDSRAVLSHGGAITQMSTDHEPR------------------TERSSIEDRGGFVSNLPGDVPRVNGQLAVSRAFGDKGLKTH-LSSEPDIKEATVDSQTDVLLLASDGIW 235          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
P2C02_ARATH9.907e-1731.25Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C27_ARATH1.690e-1630.89Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
PPM1F_RAT2.207e-1632.45Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]
P2C02_ORYSJ2.207e-1627.62Probable protein phosphatase 2C 2 OS=Oryza sativa ... [more]
PPM1F_HUMAN3.765e-1631.91Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]
P2C47_ORYSJ3.765e-1627.13Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
P2C10_ARATH4.917e-1632.80Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C25_ARATH6.421e-1632.29Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
P2C21_ARATH6.421e-1625.93Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C09_ARATH6.421e-1634.74Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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