FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16
Identity = 59/188 (31.38%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A+FA++DGHGG  AA YA   LH N++           A    FR TDE  +Q++     + G T V  +I G  + VA +GD++ ++ R                 +A+ + + HK     E+ RI+  GG V   G  R+ G L VSRA GD + K + +    D  S  +   + ++IL CDG +
Sbjct:  264 AYFAVFDGHGGVDAAIYASVHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKG---------------QAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPY-ICGDADSASTVLDGTEDYLILACDGFY 435          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16
Identity = 59/188 (31.38%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A+FA++DGHGG  AA YA   LH N++           A    FR TDE  +Q++     + G T V  +I G  + VA +GD++ ++ R                 +A+ + + HK     E+ RI+  GG V   G  R+ G L VSRA GD + K + +    D  S  +   + ++IL CDG +
Sbjct:  264 AYFAVFDGHGGVDAAIYASVHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKG---------------QAVELMKPHKPDREDEKQRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHKPY-ICGDADSASTVLDGTEDYLILACDGFY 435          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C08_ORYSJ (Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15
Identity = 64/207 (30.92%), Postives = 103/207 (49.76%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRK-------------TDESLLQESVS----------GGWQD--------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            FA+YDGHGG   AE  ++R+H  V+ A   R R+              D +  +E+++          GG ++        G+TAV   +  R + VAN GD++AV++R  +               A+ ++ +HK   P E  R++ +GG V + NG R+ G L  SR+ GD   K + V+A P++   + T++D F+IL  DGLW
Sbjct:  140 FAVYDGHGGSRVAEACRERMH--VVLAEEVRVRRLLQGGGGGADVEDEDRARWKEAMAACFTRVDGEVGGAEEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGV---------------AVPLSSDHKPDRPDEMERVEAAGGRVINWNGYRILGVLATSRSIGDYYLKPY-VIAEPEVTVMDRTDKDEFLILASDGLW 328          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 58/188 (30.85%), Postives = 90/188 (47.87%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A+FA++DGHGG  AA YA   LH N++           A    FR TDE  +Q++     + G T V  +I G  + VA +GD++ ++ R                 +A+ + + HK     E+ RI+  GG +   G  R+ G L VSRA GD + K + +    D  S  +   + ++IL CDG +
Sbjct:  278 AYFAVFDGHGGVDAAIYASIHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKG---------------QAVELMKPHKPDREDEKQRIEALGGCIVWFGAWRVNGSLSVSRAIGDAEHKPY-ICGDADSASTVLDGTEDYLILACDGFY 449          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 64/203 (31.53%), Postives = 94/203 (46.31%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTER-DHFIILRCDGLW 801
            FA+YDGH G   A+Y  + L  ++        SAG P            F + DE +  + E   G  + G+TAV + I  +  +  N GD++ ++ R+                K    T++HK   P E+ RIQ +GG+V    R+ G L VSRA GD  +K        +  V   P++H  E +E  D FIIL CDG+W
Sbjct:   56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVYFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW 242          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 68/214 (31.78%), Postives = 99/214 (46.26%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGG---WQD-----------------------------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            FA+YDGHGG   AE  +KR+H  V+ A     R+    L  +S SGG   W++                                   G+TAV   +  R + VAN GD++AV++R  +               A+ ++ +HK   P E  R++ +GG V + NG R+ G L  SR+ GD   K F V A P++   E T++D F+IL  DGLW
Sbjct:  122 FAVYDGHGGSRVAEACRKRMH--VVLAEEVSLRR----LRGQSASGGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGV---------------ALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPF-VSAEPEVRVVERTDKDEFLILASDGLW 313          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 63/189 (33.33%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAVCIWIL-GRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSN----GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            FAI+DGH G     Y QK L AN+++          A +  + KTD+++L  +   G Q G+TAV   +L GR ++VAN+GD++AV+ +                 + I ++ +H      ER+ I+  GG VS+      R+ G+L VSRAFGDR  K   + + PDI   ++      ++L  DGLW
Sbjct:   68 FAIFDGHLGDTVPAYLQKNLFANILNEEEFLTQPDRAIIKAYEKTDQAILSHTPDLG-QGGSTAVTAILLNGRKLWVANVGDSRAVLLKGG---------------RPIQMSTDHDP--NVERSAIENRGGFVSNMPGDVPRVCGQLAVSRAFGDRNLKSL-LKSEPDIKVEDIDYTAELLVLASDGLW 237          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: Y0417_DROME (Probable protein phosphatase CG10417 OS=Drosophila melanogaster GN=CG10417 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.868e-15
Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  418 GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            G   G TAV   + GR ++VAN GD++ V++RS                +AI ++ +HK    +E +RI K+GG V+ +GR+ G L +SRA GD  +K        +  + A PDI    +T  D F++L CDG+W
Sbjct:  389 GKDSGCTAVVCLLQGRDLYVANAGDSRCVISRSG---------------QAIEMSIDHKPEDDEEASRIIKAGGRVTLDGRVNGGLNLSRALGDHAYKTNVTLPAEEQMISALPDIKKLIITPEDEFMVLACDGIW 509          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 62/197 (31.47%), Postives = 96/197 (48.73%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRK-------------------TDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVV-ATPDIHSFEVTE-RDHFIILRCDGLW 801
            F I+DGHGG  AAEY + RL    +   L  + K                    D  +L++      + G T +   +  + + VAN+GD++ V+      DG+           AI ++ +HK    +ER RI+++GG +S NG  R+QG L +SR+ GD   K   VV   PDI +F++ + +  F+IL  DGLW
Sbjct:  124 FGIFDGHGGETAAEYVKSRL-PEALKQHLQDYEKDKENSVLTYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDK---DGN-----------AIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLW 305          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 62/197 (31.47%), Postives = 96/197 (48.73%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRK-------------------TDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVV-ATPDIHSFEVTE-RDHFIILRCDGLW 801
            F I+DGHGG  AAEY + RL    +   L  + K                    D  +L++      + G T +   +  + + VAN+GD++ V+      DG+           AI ++ +HK    +ER RI+++GG +S NG  R+QG L +SR+ GD   K   VV   PDI +F++ + +  F+IL  DGLW
Sbjct:  124 FGIFDGHGGETAAEYVKSRL-PEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDK---DGN-----------AIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLW 305          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PPM1E_RAT8.387e-1631.38Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE8.387e-1631.38Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
P2C08_ORYSJ1.095e-1530.92Probable protein phosphatase 2C 8 OS=Oryza sativa ... [more]
PPM1E_HUMAN1.431e-1530.85Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
PPM1A_BOVIN1.431e-1531.53Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
P2C51_ORYSJ1.431e-1531.78Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C41_ORYSJ1.431e-1533.33Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
Y0417_DROME1.868e-1535.29Probable protein phosphatase CG10417 OS=Drosophila... [more]
PPM1L_MOUSE2.440e-1531.47Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1L_HUMAN2.440e-1531.47Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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