FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 62/197 (31.47%), Postives = 96/197 (48.73%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRK-------------------TDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGDRQFKKFGVV-ATPDIHSFEVTE-RDHFIILRCDGLW 801
            F I+DGHGG  AAEY + RL    +   L  + K                    D  +L++      + G T +   +  + + VAN+GD++ V+      DG+           AI ++ +HK    +ER RI+++GG +S NG  R+QG L +SR+ GD   K   VV   PDI +F++ + +  F+IL  DGLW
Sbjct:  124 FGIFDGHGGETAAEYVKSRL-PEALKQHLQDYEKDKENSVLSYQTILEQQILSIDREMLEKLTVSYDEAGTTCLIALLSDKDLTVANVGDSRGVLCDK---DGN-----------AIPLSHDHKPYQLKERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLKNLNVVIPDPDILTFDLDKLQPEFMILASDGLW 305          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 64/203 (31.53%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERD-HFIILRCDGLW 801
            FA+YDGH G   A+Y  + L  ++        SAG P            F + DE +  + E   G  + G+TAV + I  +  +  N GD++ ++ R+                K    T++HK   P E+ RIQ +GG+V    R+ G L VSRA GD  +K           V   P++H  E +E D  FIIL CDG+W
Sbjct:   56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW 242          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 64/203 (31.53%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERD-HFIILRCDGLW 801
            FA+YDGH G   A+Y  + L  ++        SAG P            F + DE +  + E   G  + G+TAV + I  +  +  N GD++ ++ R+                K    T++HK   P E+ RIQ +GG+V    R+ G L VSRA GD  +K           V   P++H  E +E D  FIIL CDG+W
Sbjct:   56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW 242          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 64/203 (31.53%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERD-HFIILRCDGLW 801
            FA+YDGH G   A+Y  + L  ++        SAG P            F + DE +  + E   G  + G+TAV + I  +  +  N GD++ ++ R+                K    T++HK   P E+ RIQ +GG+V    R+ G L VSRA GD  +K           V   P++H  E +E D  FIIL CDG+W
Sbjct:   56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFRGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW 242          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 64/203 (31.53%), Postives = 93/203 (45.81%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI-------SAGLPR-----------FRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERD-HFIILRCDGLW 801
            FA+YDGH G   A+Y  + L  ++        SAG P            F + DE +  + E   G  + G+TAV + I  +  +  N GD++ ++ R+                K    T++HK   P E+ RIQ +GG+V    R+ G L VSRA GD  +K           V   P++H  E +E D  FIIL CDG+W
Sbjct:   56 FAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR---------------KVHFFTQDHKPSNPLEKERIQNAGGSVMIQ-RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIW 242          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 59/204 (28.92%), Postives = 101/204 (49.51%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS-----------AGLPRFRKTDESLL-----------QESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            F ++DGHGGR  A++ +K     ++            A    F K DE L+           + + +     G TA    I   T++VAN GD++ V+ R+      N + D         ++ +HK   P+E++RI+++GG VS +GR+ G L +SRA GD ++K+          ++A PD+   E+  +D F++L CDG++
Sbjct:   53 FGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEEALKETFLKMDELLVTPEGQKELNQYKATDTDESYAGCTANVALIYKNTLYVANAGDSRTVLCRN------NANYD---------MSVDHKPDNPEEKSRIERAGGFVS-DGRVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVF 240          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 64/237 (27.00%), Postives = 103/237 (43.46%), Query Frame = 1
Query:  286 IYDGHGGRLAAEYAQKRLHANVIS-----AG--------------------------------LPRFRKTDESLLQESVSG--------------------GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            +YDGHGG++ +++  K LH  V+S     AG                                + +F    E L+    SG                    G   G+TA    +  + +FVAN GD++ V++R +               +A  ++R+HK     E+ RI K+GG + + GR+ G L +SRA GD +FK        K  V A+PD+++ E+ + D F++L CDG+W
Sbjct:   55 VYDGHGGKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKN---------------QAYNLSRDHKPDLEAEKERILKAGGFIHA-GRVNGSLNLSRAIGDMEFKQNKFLPSEKQIVTASPDVNTVELCDDDDFLVLACDGIW 275          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C43_ARATH (Probable protein phosphatase 2C 43 OS=Arabidopsis thaliana GN=At3g17250 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 56/205 (27.32%), Postives = 93/205 (45.37%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVISAGLPR---------------------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            A + ++DGHGG  A++Y ++   +      + R                     +R  D ++  E +      G TA+   ++GR + VAN+GD +AV+ R                 KA+ ++ +HK+ +  ER R++  GG       L G L V+RA GD   K+F         +++ PDI    +TE D F+I+ CDG+W
Sbjct:  157 AFYGVFDGHGGSDASQYIKENAMSLFFEDAVFRQSPSVVDSLFLKELETSHREAYRLADLAMEDERIVSS-SCGTTALTALVIGRHLMVANVGDCRAVLCRKG---------------KAVDMSFDHKSTFEPERRRVEDLGGYFEGE-YLYGDLAVTRALGDWSIKRFSPLGESLSPLISDPDIQQMILTEEDEFLIMGCDGVW 344          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQDGATAV-CIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSN----GRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            +AI+DGH G   A+Y Q  L  N++S          A    ++ TD+ +LQ  V  G + G+TAV  I I G+ + VAN+GD++A++ R S V            +K I V  E      +ER  ++  GG VS       R+ G+L ++RAFGD   K+  +   P+I   E+ +   F+IL  DGLW
Sbjct:   20 YAIFDGHSGSDVADYLQNHLFDNILSQPDFWRNPKKAIKRAYKSTDDYILQNVV--GPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDV------------VKQITVDHEP----DKERDLVKSKGGFVSQKPGNVPRVDGQLAMTRAFGDGGLKEH-ISVIPNIEIAEIHDDTKFLILASDGLW 189          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15
Identity = 60/204 (29.41%), Postives = 102/204 (50.00%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS-----------AGLPRFRKTDESLLQES-------VSGGWQD----GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            FA++DGHGG   A +A++     ++            A    F K D+ L + S       + G   +    G TA    I+G+T++VAN GD+++ + R    DG           K   ++++HK    QE+ RI+++GG VS +GR+ G L +SRA GD ++KK          + A PD+   +++  D F+++ CDG++
Sbjct:   53 FAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGLDELNKIRGVTDEASLAGCTANVALIVGKTLYVANAGDSRSFLNR----DG-----------KPFDMSKDHKPDDEQEKKRIERAGGFVS-DGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVF 240          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PPM1L_BOVIN2.440e-1531.47Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
PPM1A_RAT2.440e-1531.53Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1A_RABIT2.440e-1531.53Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_MOUSE2.440e-1531.53Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]
PPM1A_HUMAN2.440e-1531.53Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PP2C2_PARTE2.440e-1528.92Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
P2C60_ARATH2.440e-1527.00Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C43_ARATH2.440e-1527.32Probable protein phosphatase 2C 43 OS=Arabidopsis ... [more]
P2C28_ARATH2.440e-1533.86Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
PP2C6_PARTE4.162e-1529.41Probable protein phosphatase 2C 6 OS=Paramecium te... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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