FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS-----------AGLPRFRKTDESLLQESVSG------GWQD-----GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            FA++DGHGG   A +A++     ++            A    F K D+ L + S         G  D     G TA    I+G+T++VAN GD+++ + R    DG           K   ++++HK    QE+ RI+++GG VS +GR  G L +SRA GD ++KK          + A PD+   ++T  D F+++ CDG++
Sbjct:   53 FAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGQDELNKIRGVNDETSLAGCTANVALIVGKTLYVANAGDSRSFLNR----DG-----------KPFDMSKDHKPDDDQEKKRIERAGGFVS-DGRANGNLSLSRALGDLEYKKDSRFKPEEQIISALPDVKVTQLTASDKFLLMGCDGVF 240          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15
Identity = 59/204 (28.92%), Postives = 100/204 (49.02%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS-----------AGLPRFRKTDESLLQESVSGGWQD-----------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            F ++DGHGGR  A++ +K     ++            A    F K DE L+    +    +           G TA    I   T++VAN GD+++V+ R+      N + D         ++ +HK    +E++RI+++GG VS +GR+ G L +SRA GD ++K           ++A PD+   E+T +D FI++ CDG++
Sbjct:   53 FGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEDALKETFLKMDELLMTPEGAKELNNYKATDTDESYAGCTANVALIHKNTLYVANAGDSRSVLCRN------NTNFD---------MSVDHKPDNNEEKSRIERAGGFVS-DGRVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVF 240          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15
Identity = 62/196 (31.63%), Postives = 89/196 (45.41%), Query Frame = 1
Query:  268 RCAHFAIYDGHGGRLAAEYAQKRL---------------HANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTV---SSNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            + A F ++DGHGG+ AAE+  + +                     A    + KTDE  L+   SG    GA  V   +    + V+N GD +AV++R+                KA  +T +H+A    ER RI+  GG V       R+QG L VSR  GD   K++ VV+ PD  +  V  +  F+IL  DGLW
Sbjct:  160 KVAFFGVFDGHGGKSAAEFVAENMPKFMAEEMCKVDGGDSGETEQAVKRCYLKTDEEFLKREESG----GACCVTALLQKGGLVVSNAGDCRAVLSRAG---------------KAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQW-VVSDPDTTTLGVDSQCEFLILASDGLW 335          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.162e-15
Identity = 59/193 (30.57%), Postives = 92/193 (47.67%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS-AGLP---------RFRKTDESLLQE-SVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD---RQFKKFG-----VVATPDIHSFEVTERDHFIILRCDGLW 801
            + ++DGHGG+ AA Y +  L   ++  A  P          F +TD    +  S       G TA+   I GR++ VAN GD +AV++R                  AI ++++H+     ER RI+  GG V  +G L G+L V+RA GD      K+ G     + A P++    +T+ D F+I+  DG+W
Sbjct:   94 YGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRG---------------TAIEMSKDHRTCCLNERKRIESLGGYV-DDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIW 270          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15
Identity = 64/195 (32.82%), Postives = 88/195 (45.13%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANV----------------ISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS-SNG--RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A F ++DGHGG  AAE+A   L  N+                 SA    + KTDE  L+E    G + GA  V   I    + V+N GD +AV++R    +                +T +H      E  RI+  GG V   NG  R+QG L VSR  GDR  K++ V+A P+  +  +     F+IL  DGLW
Sbjct:  160 AFFGVFDGHGGSKAAEFAAMNLGNNIEAAMASARSGEDGCSMESAIREGYIKTDEDFLKE----GSRGGACCVTALISKGELAVSNAGDCRAVMSRGGTAE---------------ALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEW-VIAEPETRTLRIKPEFEFLILASDGLW 334          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C13_ARATH (Probable protein phosphatase 2C 13 OS=Arabidopsis thaliana GN=At1g48040 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 7.100e-15
Identity = 59/203 (29.06%), Postives = 95/203 (46.80%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRL----HANVISAGLPR-----------------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKK------FGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A + ++DGHGG  AA + ++ L      + +   +P                  F   D ++  E++  G   G TA+   I+GR + VAN GD +AV+ R  +               A+ ++ +H++ Y  ER RI+  GG    +G L G L V+RA GD + K         +++ P+I    +TE D F+IL CDG+W
Sbjct:  115 AFYGVFDGHGGPEAAIFMKENLTRLFFQDAVFPEMPSIVDAFFLEELENSHRKAFALADLAMADETIVSG-SCGTTALTALIIGRHLLVANAGDCRAVLCRRGV---------------AVDMSFDHRSTYEPERRRIEDLGGYFE-DGYLNGVLAVTRAIGDWELKNPFTDSSSPLISDPEIGQIILTEDDEFLILACDGIW 300          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 9.273e-15
Identity = 63/207 (30.43%), Postives = 90/207 (43.48%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESV-------------------------SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            FA+YDGH G   A Y    L  ++ +    R      S L+ SV                         +G  + G+TAV + I  + ++  N GD++AV+ RS  V  S               T++HK   P+E+ RIQ +GG+V    R+ G L VSRA GD  +K           V   P+++     E D FIIL CDG+W
Sbjct:   56 FAVYDGHAGSRVANYCSTHLLEHITNNEDFRAAGKSGSALEPSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFS---------------TQDHKPCNPREKERIQNAGGSVMIQ-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIW 246          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 60/197 (30.46%), Postives = 95/197 (48.22%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTD-------ESLLQES--VSGGWQ----DGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            A FA+ DGHGG  AA +  + L   V+    P  ++ D        + LQ    +S  W      G+TAV + +  R +++A+ GD++A+++RS  V                  T +H+   P+ER RI  +GGTV    R++G L VSRA GD  +K+          V A P++ +    + D F++L  DG+W
Sbjct:   90 AFFAVLDGHGGARAARFGARHLPGYVLGELGPAPQEPDGVRQALRSAFLQADAQLSALWPRGDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSV---------------AFCTEDHRPHRPRERERIHDAGGTVRRR-RVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVW 270          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 62/200 (31.00%), Postives = 94/200 (47.00%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYAQKRLHANVISAGLPR--------------FRKTDESL--LQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            A FA+ DGHGG  AA +  + L  +V+    P               F   DE L  L   V  G   G TAV + +  R +++A+ GD++AV++R+  V  S               T +H+ + P+ER RI  +GGT+    R++G L VSRA GD  +K+          V A P++ +      D F++L  DG+W
Sbjct:   97 ALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREALRRAFLSADERLRSLWPRVETG---GCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFS---------------TEDHRPLRPRERERIHAAGGTIRRR-RVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVW 277          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 68/199 (34.17%), Postives = 93/199 (46.73%), Query Frame = 1
Query:  274 AHFAIYDGHGGRLAAEYA----------QKRLH-ANVISAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILG--RTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK---KFG-----VVATPDI--HSFEVTERDHFIILRCDGLW 801
            A + I+DGHGG   AEY           QK  H  N+  A +  F  TD  LLQ+ V      G TA  I +      +   N GD++ V+A     DG+           A  ++ +HK     E++RI  + G V  + R+ G L +SRA GD +FK   K G     V   PDI  HS +  +RD F+IL CDG+W
Sbjct:   56 AFYGIFDGHGGAKVAEYCGNKIVEILQEQKSFHEGNLPRALIDTFINTDVKLLQDPVMKEDHSGCTATSILVSKSQNLLVCGNAGDSRTVLA----TDGN-----------AKALSYDHKPTLASEKSRIVAADGFVEMD-RVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDY-DRDEFVILACDGIW 237          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PP2C5_PARTE4.162e-1530.39Probable protein phosphatase 2C 5 OS=Paramecium te... [more]
PP2C3_PARTE4.162e-1528.92Probable protein phosphatase 2C 3 OS=Paramecium te... [more]
P2C32_ORYSJ4.162e-1531.63Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C27_ORYSJ4.162e-1530.57Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C30_ARATH5.436e-1532.82Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C13_ARATH7.100e-1529.06Probable protein phosphatase 2C 13 OS=Arabidopsis ... [more]
PPM1B_BOVIN9.273e-1530.43Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPMBL_MOUSE1.211e-1430.46Probable protein phosphatase 1B-like OS=Mus muscul... [more]
PPMBL_HUMAN1.211e-1431.00Probable protein phosphatase 1B-like OS=Homo sapie... [more]
PP2C2_YEAST1.211e-1434.17Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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