FC876859

Overview
NameFC876859
Unique NameFC876859
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PPM1G_BOVIN (Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 1
Query:  418 GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            G   G TAV   I G+ + VAN GD++ VV+ +                KA+ ++ +HK     E ARI+ +GG V+ +GR+ G L +SRA GD  +K+          + A PDI    +T+   F+++ CDG+W
Sbjct:  322 GSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAG---------------KALDMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 442          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: PP2C1_CAEEL (Probable protein phosphatase 2C F42G9.1 OS=Caenorhabditis elegans GN=F42G9.1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13
Identity = 51/160 (31.87%), Postives = 81/160 (50.62%), Query Frame = 1
Query:  379 KTDESLLQESV------SGG----WQDGATAVCIWILGRT-VFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFKKFG--------VVATPDIHSFEVTERDHFIILRCDGLW 801
            ++DE ++  S+      SGG     +D  T  C+ ++G+  V VAN GD++AV+ R+                KA+ ++ +HK     E  RI  +GG +  +GR+ G L +SRAFGD  +KK          + A PD+    +T  D FI++ CDG+W
Sbjct:  288 QSDEEMVDGSLAPLLLGSGGAEVPGEDSGTTACVCLVGKDKVIVANAGDSRAVLCRNG---------------KAVDLSVDHKPEDEVETNRIHAAGGQIE-DGRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGIW 431          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.645e-13
Identity = 62/205 (30.24%), Postives = 91/205 (44.39%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI-------------SAGLPRFRKTDE-------SLLQESVSGGWQD---------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            F +YDGHGG   A Y ++RLHA ++             + G   F+K  E       S + E V G             G+TAV   I    + VAN GD++AV+ R                 + + ++ +HK     E ARI+  GG V   NG R+ G L +SR+ GDR  K + ++  P+I      + D  ++L  DGLW
Sbjct:  201 FGVYDGHGGAQVANYCRERLHAALVEELSRIEGSVSGANLGSVEFKKKWEQAFVDCFSRVDEEVGGNASRGEAVAPETVGSTAVVAVICSSHIIVANCGDSRAVLCRGK---------------QPVPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIGDRYLKPW-IIPVPEITIVPRAKDDECLVLASDGLW 389          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.133e-12
Identity = 55/161 (34.16%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  358 AGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-------------NGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            A L   ++ D+ L        +  G T+V +   G  + V NIGD++AV+A            DE ++L A+ +T + K   P E ARIQK  G V +             N    G L ++RAFGD   K +G+++ PDI+   +TERD FIIL  DG+W
Sbjct:  198 AMLKSCQQIDKELKMHPTIDCFCSGTTSVTLIKQGEDLVVGNIGDSRAVLATR----------DEDNALLAVQLTIDLKPDLPGESARIQKCKGRVFALQDEPEVARVWLPNSDSPG-LAMARAFGDFCLKDYGLISVPDINYRRLTERDQFIILASDGVW 347          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.133e-12
Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 1
Query:  430 GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGDRQFK--------KFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            G TA    I    + VAN GD++ V++R+                +A  ++R+HK     ER RI K+GG +   GR+ G L ++RA GD +FK        K  V A PDI+  E+ + D F++L CDG+W
Sbjct:  160 GCTACVALIRNNQLVVANAGDSRCVISRAG---------------QAYNLSRDHKPELEAERDRIVKAGGFIHM-GRINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIW 275          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C64_ORYSJ (Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.480e-12
Identity = 58/205 (28.29%), Postives = 93/205 (45.37%), Query Frame = 1
Query:  286 IYDGHG--GRLAAEYAQKRLHANVISAG------LPR----------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEV---------------SRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            ++DGHG  G + A   +  L   ++SA       +P           ++  D+ L        +  G+TAV +  LG  +++ANIGD++AV+       G          + A+ +T + K   P E  RI+K  G V +   LQ   EV               +RAFGD   K +GV++ P+   + +TE+D F+IL  DG+W
Sbjct:   87 VFDGHGPHGHVVARRVRDSLPLRLMSAARDSGADMPAAAWRKAFARAYKAMDKDLRSHPSLDCFCSGSTAVTVLKLGSDLYMANIGDSRAVLGSREATGGG---------MVAVQLTVDLKPDVPSEAERIKKCRGRVFA---LQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISVPEFFHWSLTEKDQFVILASDGVW 279          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.480e-12
Identity = 59/207 (28.50%), Postives = 93/207 (44.93%), Query Frame = 1
Query:  259 PNLRCAHFAIYDGHGGRLAAEYAQKRLH---ANVISAGLP------------------RFRKTD---ESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS--SNGRLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            P      F +YDGHGG   A Y ++R+H   A  I+   P                   F + D   ES+  E+V      G+T+V   +    +FVAN GD++AV+ R                  A+ ++ +HK     E ARI+ +GG V   +  R+ G L +SR+ GDR  K   ++  P++ + +  + D  +IL  DG+W
Sbjct:  166 PQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV------GSTSVVAVVFPSHIFVANCGDSRAVLCRGK---------------TALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKP-SIIPDPEVTAVKRVKEDDCLILASDGVW 350          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.480e-12
Identity = 56/198 (28.28%), Postives = 92/198 (46.46%), Query Frame = 1
Query:  262 NLRCAHFAIYDGHGGRLAAEYAQKRLHANVIS-AGLP---------RFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD---RQFKKFG-----VVATPDIHSFEVTERDHFIILRCDGLW 801
            N   + + ++DGHGG+ AA + +  L   ++  A  P          F   D    + ++S G     TA+   I GRT+ +AN GD +AV++R                  AI ++ +H+     E+ R++  GG V  +G L G L V+RA GD      K+ G     + A P++    +T+ D F+I+  DG+W
Sbjct:   99 NEAISFYGVFDGHGGKDAAHFVRDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAKTTLSSG----TTALTAMIFGRTLLIANAGDCRAVLSRCG---------------TAIEMSVDHRPCSLSEKLRVESLGGYV-DDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIW 276          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.933e-12
Identity = 60/213 (28.17%), Postives = 88/213 (41.31%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVISAGLPRFRKTDESLLQESVSGGWQD-------------------------------------GATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSS-NG-RLQGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            F ++DGHGG   A Y ++R+H  V+S  L R  K    + +  +   W D                                     G+TAV   +    V VAN GD++ V+ R                 + + ++ +HK     ERARI+  GG V   NG R+ G L +SR+ GDR  K F V+  P++      + D  +IL  DGLW
Sbjct:  114 FGVFDGHGGAEVANYCRERIHV-VLSEELKRLGKNLGEMGEVDMKEHWDDVFTKCFQRVDDEVSGRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGK---------------EPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGDRYLKPF-VIPKPEVMVVPRAKDDDCLILASDGLW 309          
BLAST of FC876859 vs. ExPASy Swiss-Prot
Match: P2C04_ORYSJ (Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica GN=Os01g0541900 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.298e-12
Identity = 58/196 (29.59%), Postives = 89/196 (45.41%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQ-------KRLHANV--ISAGLPRFRKTDESLLQESV---------SGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVS---SNGRL-QGRLEVSRAFGDRQFKKFGVVATPDIHSFEVTERDHFIILRCDGLW 801
            F I+DGH G  AAE++        K+ ++N     A    F +TD +  +E +            W  G TAV   I+   +FVAN GD +A++ R+                +   +TR+H A  P+ER RI K G  V       R+    L+V+R+ GD   K   V A P++    ++  D F+++  DGLW
Sbjct:  422 FGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAG---------------EPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKP-AVTAQPEVIETILSPDDEFLVMASDGLW 601          
The following BLAST results are available for this feature:
BLAST of FC876859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
PPM1G_BOVIN5.088e-1333.09Protein phosphatase 1G OS=Bos taurus GN=PPM1G PE=2... [more]
PP2C1_CAEEL5.088e-1331.88Probable protein phosphatase 2C F42G9.1 OS=Caenorh... [more]
P2C06_ORYSJ6.645e-1330.24Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C18_ARATH1.133e-1234.16Probable protein phosphatase 2C 18 OS=Arabidopsis ... [more]
P2C11_ORYSJ1.133e-1234.85Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C64_ORYSJ1.480e-1228.29Probable protein phosphatase 2C 64 OS=Oryza sativa... [more]
P2C56_ARATH1.480e-1228.50Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C54_ORYSJ1.480e-1228.28Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C50_ORYSJ1.933e-1228.17Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C04_ORYSJ3.298e-1229.59Protein kinase and PP2C-like domain-containing pro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF06RM1 EHR Citrus clementina cDNA clone KN0AAN1CF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876859 ID=FC876859; Name=FC876859; organism=Citrus clementina; type=EST; length=803bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
GCCAATTTAAAAAGTTTGGTGTTGTTGCAACGCCCGACATTCATTCCTTT
GAGGTTACTGAGAGGGATCACTTCATCATTCTAAGGTGTGATGGTCTGTG
GGG
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