FC876861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP4_HUMAN (Multidrug resistance-associated protein 4 OS=Homo sapiens GN=ABCC4 PE=1 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 3.919e-33 Identity = 63/133 (47.37%), Postives = 100/133 (75.19%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS-FSKLVAE 745 D+E+W AL++ Q K I L K+D+ +++ G N+S GQRQL+CL R +L++N+IL++DEA A++D TD ++Q+ IR++F++CTV+T+AHR+ T+IDSD +MVL G+L EYDEP +++ S F K+V + Sbjct: 1143 DEELWNALQEVQLKETIEDLPGKMDTELAESGSNFSVGQRQLVCLARAILRKNQILIIDEATANVDPRTDELIQKKIREKFAHCTVLTIAHRLNTIIDSDKIMVLDSGRLKEYDEPYVLLQNKESLFYKMVQQ 1275
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP2_RABIT (Canalicular multispecific organic anion transporter 1 OS=Oryctolagus cuniculus GN=ABCC2 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.919e-33 Identity = 68/151 (45.03%), Postives = 103/151 (68.21%), Query Frame = -2 Query: 323 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE----------YWSSCRRNS 745 D+EIW+ALE K+ ++ L++ L VS+ +N S GQRQLLCLGR LL++++ILVLDEA A++D TD ++Q IR EFS+CTVIT+AHR+ T++DSD +MVL G ++EY P +++E+ FS + E +W++ R++ Sbjct: 1401 DEEIWRALELAHLKSFVAGLQHGLSREVSEAEDNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDHLIQTTIRNEFSHCTVITIAHRLHTIMDSDKIMVLDNGNIVEYGSPEELLESAGPFSLMAKESGIENVNNTAFWAAAARDA 1551
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP2_RAT (Canalicular multispecific organic anion transporter 1 OS=Rattus norvegicus GN=Abcc2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.118e-33 Identity = 65/132 (49.24%), Postives = 97/132 (73.48%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 D+E+W+ALE ++ +S L+ L S V++ G+N S GQRQLLCLGR +L++++ILVLDEA A++D TD+++Q IR+EFS CTVIT+AHR+ T++DSD +MVL GK++EY P +++ SF + E Sbjct: 1399 DEEVWRALELAHLRSFVSGLQLGLLSEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRKEFSQCTVITIAHRLHTIMDSDKIMVLDNGKIVEYGSPEELLSNRGSFYLMAKE 1530
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.540e-32 Identity = 62/132 (46.97%), Postives = 93/132 (70.45%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 DD++W L+ Q + SL LDS V++ G+NWS GQRQLLCL R LL+ +ILVLDEA AS+D +D+++Q IR++FSNCT++T+AHR+ T++DSD ++VL GK+ E+DEP +++ + + E Sbjct: 1165 DDQLWSVLKDIQLHDVAKSLEGGLDSKVTENGDNWSVGQRQLLCLARALLRDPKILVLDEATASVDGHSDSLIQATIREKFSNCTILTIAHRLNTIMDSDRIIVLDAGKISEFDEPWTLLQNPAGLLNWLVE 1296
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP2_MOUSE (Canalicular multispecific organic anion transporter 1 OS=Mus musculus GN=Abcc2 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.261e-31 Identity = 64/132 (48.48%), Postives = 94/132 (71.21%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 D+EIW+ALE K+ ++ L+ L V++ G+N S GQRQLLCLGR +L++++ILVLDEA A++D TD+++Q IR EFS CTVIT+AHR+ T++DSD +MVL GK++EY P +++ F + E Sbjct: 1401 DEEIWRALELAHLKSFVAGLQLGLLHEVTEGGDNLSIGQRQLLCLGRAVLRKSKILVLDEATAAVDLETDSLIQTTIRNEFSQCTVITIAHRLHTIMDSDKIMVLDSGKIVEYGSPEELLSNMGPFYLMAKE 1532
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC8_DICDI (ABC transporter C family member 8 OS=Dictyostelium discoideum GN=abcC8 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31 Identity = 64/125 (51.20%), Postives = 91/125 (72.80%), Query Frame = -2 Query: 371 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS 745 D EIW+A+E I L LD+ V D G+N+S GQRQLL +GR LLK+ I+VLDEA++SID A+DA++Q IR +F++CTV+T+AHR+ T+ DSD +MVL G+L+EYD PS++++ S Sbjct: 1447 DHEIWEAIENAHLLKAIKDLDGGLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDALIQETIRTKFADCTVLTIAHRLGTIADSDKIMVLDKGELIEYDSPSELLKNQDS 1571
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP2_HUMAN (Canalicular multispecific organic anion transporter 1 OS=Homo sapiens GN=ABCC2 PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 4.790e-31 Identity = 65/132 (49.24%), Postives = 94/132 (71.21%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 D+EIWKALE K+ ++SL+ L V++ G N S GQRQLLCLGR LL++++ILVLDEA A++D TD ++Q I+ EF++CTVIT+AHR+ T++DSD VMVL GK++E P ++++ F + E Sbjct: 1403 DEEIWKALELAHLKSFVASLQLGLSHEVTEAGGNLSIGQRQLLCLGRALLRKSKILVLDEATAAVDLETDNLIQTTIQNEFAHCTVITIAHRLHTIMDSDKVMVLDNGKIIECGSPEELLQIPGPFYFMAKE 1534
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: AB11C_ARATH (ABC transporter C family member 11 OS=Arabidopsis thaliana GN=ABCC11 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.256e-31 Identity = 65/131 (49.62%), Postives = 97/131 (74.05%), Query Frame = -2 Query: 356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETN-SSFSKLV 745 D ++W+ALE+ K +I LD+ VS+ GEN+S GQRQLL L R LL+R++IL LDEA AS+D TD+++QR IR+EF +CT++ +AHR+ T+ID D ++VLS G++LEYD P +++ + S+F K+V Sbjct: 1338 DADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILFLDEATASVDVRTDSLIQRTIREEFKSCTMLIIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFKMV 1468
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP5_MOUSE (Multidrug resistance-associated protein 5 OS=Mus musculus GN=Abcc5 PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.105e-30 Identity = 59/125 (47.20%), Postives = 94/125 (75.20%), Query Frame = -2 Query: 371 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS 745 +D+IW ALE+ K I+ L KL+S V + G+N+S G+RQLLC+ R LL+ +IL+LDEA A++D+ TD ++Q IR+ F++CT++T+AHR+ TV+ SD +MVL+ G+++E+D PS ++ +SS Sbjct: 1295 EDQIWDALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVLAQGQVVEFDTPSVLLSNDSS 1419
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP5_HUMAN (Multidrug resistance-associated protein 5 OS=Homo sapiens GN=ABCC5 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 3.105e-30 Identity = 59/125 (47.20%), Postives = 94/125 (75.20%), Query Frame = -2 Query: 371 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS 745 +D+IW ALE+ K I+ L KL+S V + G+N+S G+RQLLC+ R LL+ +IL+LDEA A++D+ TD ++Q IR+ F++CT++T+AHR+ TV+ SD +MVL+ G+++E+D PS ++ +SS Sbjct: 1296 EDQIWDALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLRHCKILILDEATAAMDTETDLLIQETIREAFADCTMLTIAHRLHTVLGSDRIMVLAQGQVVEFDTPSVLLSNDSS 1420 The following BLAST results are available for this feature:
BLAST of FC876861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876861 ID=FC876861; Name=FC876861; organism=Citrus clementina; type=EST; length=746bpback to top |