FC876861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCCD_DICDI (ABC transporter C family member 13 OS=Dictyostelium discoideum GN=abcC13 PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28 Identity = 58/131 (44.27%), Postives = 94/131 (71.76%), Query Frame = -2 Query: 356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMET-NSSFSKLV 745 D EIW ALEK + K+ ISS+ KL++ + + G+ S GQ+QLLCL R +LK ++++++DEA + ID T ++++ + + F++CT++T+AHR+ T+IDS + V+ G+L+EYD P ++ T NS FSKLV Sbjct: 1206 DSEIWVALEKVKLKSTISSMPLKLETMIEEGGDGLSFGQKQLLCLSRTILKNSKVVLMDEATSGIDYVTGDLIKQTLLENFNDCTMLTIAHRLDTIIDSTKIAVVDKGELIEYDTPINLINTKNSKFSKLV 1336
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC9_RAT (ATP-binding cassette transporter sub-family C member 9 OS=Rattus norvegicus GN=Abcc9 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28 Identity = 61/131 (46.56%), Postives = 93/131 (70.99%), Query Frame = -2 Query: 356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDE-PSKVMETNSSFSKLV 745 DD +W+ALE Q K ++ SL LD++V++ GEN+S GQRQL CL R ++++ IL++DEA ASID AT+ ILQ+++ F++ TV+T+AHRV +++D+ +V+V S G L+E D P+ + N FS LV Sbjct: 1411 DDRLWEALEIAQLKNMVKSLPGGLDATVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIMDAGLVLVFSEGILVECDTGPNLLQHKNGLFSTLV 1541
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC8_HUMAN (ATP-binding cassette transporter sub-family C member 8 OS=Homo sapiens GN=ABCC8 PE=1 SV=5) HSP 1 Score: 124.02 bits (310), Expect = 8.456e-28 Identity = 55/125 (44.00%), Postives = 88/125 (70.40%), Query Frame = -2 Query: 371 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS 745 D +W+ALE Q K ++ +L LD+ +++ GEN+S GQRQL CL R +++ I ++DEA ASID AT+ ILQ+++ F++ TV+T+AHRV T++ +D+V+VL G +LE+D+P K++ S Sbjct: 1447 DSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVIVLKRGAILEFDKPEKLLSRKDS 1571
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC9_HUMAN (ATP-binding cassette transporter sub-family C member 9 OS=Homo sapiens GN=ABCC9 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27 Identity = 61/131 (46.56%), Postives = 92/131 (70.23%), Query Frame = -2 Query: 356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDE-PSKVMETNSSFSKLV 745 DD +W+ALE Q K ++ SL LD+ V++ GEN+S GQRQL CL R ++++ IL++DEA ASID AT+ ILQ+++ F++ TV+T+AHRV +++D+ +V+V S G L+E D P+ + N FS LV Sbjct: 1415 DDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSSIMDAGLVLVFSEGILVECDTVPNLLAHKNGLFSTLV 1545
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC8_CRICR (ATP-binding cassette transporter sub-family C member 8 OS=Cricetus cricetus GN=ABCC8 PE=1 SV=3) HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27 Identity = 55/125 (44.00%), Postives = 87/125 (69.60%), Query Frame = -2 Query: 371 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS 745 D +W+ALE Q K ++ +L LD+ +++ GEN+S GQRQL CL R +++ I ++DEA ASID AT+ ILQ+++ F++ TV+T+AHRV T++ +D+VMVL G +LE+D+P ++ S Sbjct: 1448 DSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVMVLKRGAILEFDKPETLLSQKDS 1572
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP1_BOVIN (Multidrug resistance-associated protein 1 OS=Bos taurus GN=ABCC1 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 56/132 (42.42%), Postives = 89/132 (67.42%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 D+E+W +LE K +S+L +KL+ ++ GEN S GQRQL+CL R LL++ +ILVLDEA A++D TD ++Q IR +F +CTV+T+AHR+ T++D V+VL G++ E+ PS +++ F + + Sbjct: 1395 DEEVWTSLELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIQEWGSPSDLLQQRGLFYSMAKD 1526
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCCB_HUMAN (ATP-binding cassette transporter sub-family C member 11 OS=Homo sapiens GN=ABCC11 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 60/139 (43.17%), Postives = 91/139 (65.47%), Query Frame = -2 Query: 332 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKV-METNSSFSKLVAEYWSSCR 745 D +IW ALE+ IS KL + V + G N+S G+RQLLC+ R +L+ ++I+++DEA ASID TD ++QR IR+ F CTV+ +AHRV TV++ D ++V+ GK++E+D P + + S F+ L+A SS R Sbjct: 1244 DQQIWDALERTFLTKAISKFPKKLHTDVVENGGNFSVGERQLLCIARAVLRNSKIILIDEATASIDMETDTLIQRTIREAFQGCTVLVIAHRVTTVLNCDHILVMGNGKVVEFDRPEVLRKKPGSLFAALMATATSSLR 1382
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP1_MOUSE (Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27 Identity = 57/132 (43.18%), Postives = 89/132 (67.42%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 D+E+W ALE K +S+L +KL+ ++ GEN S GQRQL+CL R LL++ +ILVLDEA A++D TD ++Q IR +F +CTV+T+AHR+ T++D V+VL G++ E PS++++ F + + Sbjct: 1393 DEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVRECGAPSELLQQRGIFYSMAKD 1524
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP1_CANFA (Multidrug resistance-associated protein 1 OS=Canis familiaris GN=ABCC1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27 Identity = 56/132 (42.42%), Postives = 88/132 (66.67%), Query Frame = -2 Query: 350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745 D+E+W +LE K +S L +KL+ ++ GEN S GQRQL+CL R LL++ +ILVLDEA A++D TD ++Q IR +F +CTV+T+AHR+ T++D V+VL G++ E +PS +++ F + + Sbjct: 1396 DEEVWTSLELAHLKDFVSGLPDKLNQECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFDDCTVLTIAHRLNTIMDYTRVIVLDKGEIRECGQPSDLLQQRGLFYSMAKD 1527
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP3_HUMAN (Canalicular multispecific organic anion transporter 2 OS=Homo sapiens GN=ABCC3 PE=2 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26 Identity = 59/126 (46.83%), Postives = 83/126 (65.87%), Query Frame = -2 Query: 368 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSF 745 +++IW ALE T +SS LD S+ GEN S GQRQL+CL R LL+++RILVLDEA A+ID TD ++Q IR +F CTV+T+AHR+ T++D V+VL G + E+D P+ ++ F Sbjct: 1392 EEDIWWALELSHLHTFVSSQPAGLDFQCSEGGENLSVGQRQLVCLARALLRKSRILVLDEATAAIDLETDNLIQATIRTQFDTCTVLTIAHRLNTIMDYTRVLVLDKGVVAEFDSPANLIAARGIF 1517 The following BLAST results are available for this feature:
BLAST of FC876861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876861 ID=FC876861; Name=FC876861; organism=Citrus clementina; type=EST; length=746bpback to top |