FC876861

Overview
NameFC876861
Unique NameFC876861
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10430 contig Ccv1_Contig10430:1..746. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 57/119 (47.90%), Postives = 81/119 (68.07%), Query Frame = -2
Query:  320 LDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAEYWSSCRRNSY 676
            LD  +++ G N S GQRQLLCL R LL R++ILVLDEA AS+D  TD I+Q  IR+EF + T++T+AHR+ TV+DSD ++VL  G + E+D PSK++   +S       ++S C +  Y
Sbjct: 1445 LDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVLDQGSVREFDSPSKLLSDKTSI------FYSLCEKGGY 1557          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP3_RAT (Canalicular multispecific organic anion transporter 2 OS=Rattus norvegicus GN=Abcc3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.553e-26
Identity = 56/126 (44.44%), Postives = 83/126 (65.87%), Query Frame = -2
Query:  368 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSF 745
            D++IW+ LE       +SS    LD   S+ G+N S GQRQL+CL R LL+++R+LVLDEA A+ID  TD ++Q  IR +F +CTV+T+AHR+ T++D + V+VL  G + E+D P  ++     F
Sbjct: 1387 DEDIWRTLELSHLSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIAAGGIF 1512          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP3_MOUSE (Canalicular multispecific organic anion transporter 2 OS=Mus musculus GN=Abcc3 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.553e-26
Identity = 56/126 (44.44%), Postives = 85/126 (67.46%), Query Frame = -2
Query:  368 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSF 745
            +++IW+ALE     T +SS    LD   ++ G+N S GQRQL+CL R LL+++R+LVLDEA A+ID  TD ++Q  IR +F +CTV+T+AHR+ T++D + V+VL  G + E+D P  ++     F
Sbjct: 1388 EEDIWRALELSHLNTFVSSQPAGLDFQCAEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETDDLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIAAGGIF 1513          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP1_RAT (Multidrug resistance-associated protein 1 OS=Rattus norvegicus GN=Abcc1 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.640e-26
Identity = 56/132 (42.42%), Postives = 88/132 (66.67%), Query Frame = -2
Query:  350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSSFSKLVAE 745
            D+E+W ALE    K  +S+L +KL+   ++ GEN S GQRQL+CL R LL++ +ILVLDEA A++D  TD ++Q  IR +F + TV+T+AHR+ T++D   V+VL  G++ E   PS++++    F  +  +
Sbjct: 1397 DEEVWMALELAHLKGFVSALPDKLNHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDDLIQSTIRTQFEDSTVLTIAHRLNTIMDYTRVIVLDKGEIRECGAPSELLQQRGVFYSMAKD 1528          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCCE_DICDI (ABC transporter C family member 14 OS=Dictyostelium discoideum GN=abcC14 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.640e-26
Identity = 56/132 (42.42%), Postives = 96/132 (72.73%), Query Frame = -2
Query:  356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGEN-WSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVME-TNSSFSKLV 745
            D EIW+++EK + K  I+S+  KL++++ + G+N +S GQ+QLLCL R +LK  +I+++DEA +SID  T  ++++ I++ F +CT +T+AHR+ T+ID + + V+  G+L+E+D PS +M   NS F+KL+
Sbjct: 1174 DFEIWESIEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQENFKDCTTLTIAHRLETIIDCNKIAVIDSGQLIEFDTPSNLMNIPNSKFNKLI 1305          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC6_DICDI (ABC transporter C family member 6 OS=Dictyostelium discoideum GN=abcC6 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.060e-26
Identity = 56/132 (42.42%), Postives = 96/132 (72.73%), Query Frame = -2
Query:  356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGEN-WSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVME-TNSSFSKLV 745
            D EIW+++EK + K  I+S+  KL++++ + G+N +S GQ+QLLCL R +LK  +I+++DEA +SID  T  ++++ I++ F +CT +T+AHR+ T+ID + + V+  G+L+E+D PS +M   NS F+KL+
Sbjct: 1204 DFEIWESVEKVKLKDAINSMPLKLETALQENGDNGFSYGQKQLLCLCRTILKNFKIILMDEATSSIDYHTAQLIKQTIQENFKDCTTLTIAHRLETIIDCNKIAVIDSGQLIEFDTPSNLMNIPNSKFNKLI 1335          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: YCFI_YEAST (Metal resistance protein YCF1 OS=Saccharomyces cerevisiae GN=YCF1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 57/126 (45.24%), Postives = 86/126 (68.25%), Query Frame = -2
Query:  371 DDEIWKALEKCQRKTIISSLRNK-LDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMETNSS 745
            D+ IW+ALE    K  + S+ N  LD+ +++ G N S GQRQLLCL R +L  ++ILVLDEA A++D  TD ++Q  IR  F + T++T+AHR+ T++DSD ++VL  GK+ E+D P +++  N S
Sbjct: 1375 DEAIWRALELSHLKEHVLSMSNDGLDAQLTEGGGNLSVGQRQLLCLARAMLVPSKILVLDEATAAVDVETDKVVQETIRTAFKDRTILTIAHRLNTIMDSDRIIVLDNGKVAEFDSPGQLLSDNKS 1500          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCC5_DICDI (ABC transporter C family member 5 OS=Dictyostelium discoideum GN=abcC5 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.130e-25
Identity = 59/139 (42.45%), Postives = 94/139 (67.63%), Query Frame = -2
Query:  350 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEG------ENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVMET-NSSFSKLVAE 745
            D E+W  L++ Q    +  +      SV+DEG      +NWS GQ+QL+ LGR LLK+ +ILV DEA AS+DS +D ++QRIIR++F +  ++T+AHR+ T+++SD +MVL  G ++E+++PS + +  NS F+ L+ E
Sbjct: 1313 DSELWDVLKEIQLYEHVKKV------SVADEGLDLRVNDNWSQGQKQLIGLGRALLKKPKILVCDEATASVDSLSDELIQRIIREKFKDAIILTIAHRLNTIVESDRIMVLDSGSIVEFNKPSILAQNENSLFNWLIDE 1445          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: MRP7_MOUSE (Multidrug resistance-associated protein 7 OS=Mus musculus GN=Abcc10 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.546e-24
Identity = 57/131 (43.51%), Postives = 88/131 (67.18%), Query Frame = -2
Query:  356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEPSKVM-ETNSSFSKLV 745
            D  +W+ALE+C    +  ++   LD  + + G+N S GQRQLLCL R LL   +IL +DEA AS+D  TD +LQ+ I + F+N TV+T+AHR+ T+++SD V+VL  G+++E D PS +  + +S F +L+
Sbjct: 1358 DRALWQALEQCHLSEVAVAMGG-LDGELGERGQNLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSPSALRNQPHSLFQQLL 1487          
BLAST of FC876861 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.325e-24
Identity = 51/131 (38.93%), Postives = 91/131 (69.47%), Query Frame = -2
Query:  356 DDEIWKALEKCQRKTIISSLRNKLDSSVSDEGENWSAGQRQLLCLGRVLLKRNRILVLDEANASIDSATDAILQRIIRQEFSNCTVITVAHRVPTVIDSDMVMVLSYGKLLEYDEP-SKVMETNSSFSKLV 745
            D+EIW+AL K + K ++S++  KL+S V   G+  + G +QLLCL R +L+ ++I++ DEA  SID  T  ++++ I + F +CT++T+AH + T++DSD + ++  G+L+E+D P + + ++ S FSKL+
Sbjct: 1296 DNEIWEALSKVKLKKMVSTMPMKLESLVQG-GDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLI 1425          
The following BLAST results are available for this feature:
BLAST of FC876861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
BPT1_YEAST2.083e-2647.90Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
MRP3_RAT3.553e-2644.44Canalicular multispecific organic anion transporte... [more]
MRP3_MOUSE3.553e-2644.44Canalicular multispecific organic anion transporte... [more]
MRP1_RAT4.640e-2642.42Multidrug resistance-associated protein 1 OS=Rattu... [more]
ABCCE_DICDI4.640e-2642.42ABC transporter C family member 14 OS=Dictyosteliu... [more]
ABCC6_DICDI6.060e-2642.42ABC transporter C family member 6 OS=Dictyostelium... [more]
YCFI_YEAST7.914e-2645.24Metal resistance protein YCF1 OS=Saccharomyces cer... [more]
ABCC5_DICDI5.130e-2542.45ABC transporter C family member 5 OS=Dictyostelium... [more]
MRP7_MOUSE2.546e-2443.51Multidrug resistance-associated protein 7 OS=Mus m... [more]
ABCCF_DICDI3.325e-2438.93ABC transporter C family member 15 OS=Dictyosteliu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1CF08RM1 EHR Citrus clementina cDNA clone KN0AAN1CF08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876861 ID=FC876861; Name=FC876861; organism=Citrus clementina; type=EST; length=746bp
GATAAACTGAAAACTTTTTATTATTGAATCAATGTATTTTACACACTTAT
ATCACGAGTATCCATTCCTTGTATAATAAACTGTTACACATGCACGTAGT
AATTCTTAAACCAATATAACAGATTGAGCCACGTCACCTAACTATAACAA
ACTGAACCACGTCAGCTTACGGAGCTAATCTGCTACAGTCCAACACACAG
TAACAATCATGTGCTCGCTTCCTCTGTTTCATCACAATTAACCAGTTTCA
CTAACAGTGGGACCCGTTCATGCAGAATTTCGGTTGTTGAGCTCATTACT
GAAAGTTATTCAAATTCTGGTAGGAATTTCTCCTGCAACTTGACCAGTAC
TCTGCTACAAGCTTGGAAAAGGAGGAATTAGTTTCCATAACCTTTGATGG
TTCATCATACTCCAACAATTTTCCATATGAGAGCACCATGACCATGTCAC
TATCAATAACAGTTGGTACTCTATGAGCTACCGTTATCACTGTGCAGTTG
GAGAATTCCTGCCTGATAATTCTCTGTAGAATAGCATCTGTTGCGGAATC
AATGGAAGCGTTAGCTTCATCCAGAACTAGAATTCTATTTCTCTTTAGGA
GGACTCTTCCAAGGCACAAGAGTTGGCGTTGCCCCGCGCTCCAATTTTCA
CCTTCATCACTCACAGATGAGTCCAGCTTATTGCGCAGGCTGCTGATAAT
TGTCTTACGCTGACACTTCTCCAGAGCCTTCCATATTTCATCATCT
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