FC876875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_PICTO (30S ribosomal protein S12P OS=Picrophilus torridus GN=rps12p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.108e-14 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ AKGIV+E +GIEAKQP S IRKC ++QLIKNG++++AF P DG +NY Sbjct: 41 GAPQAKGIVIEKVGIEAKQPNSGIRKCVKIQLIKNGRQLSAFAPGDGAINY 91 HSP 2 Score: 25.0238 bits (53), Expect = 1.108e-14 Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 1 Query: 88 GRGAGRMLKSHRRRPRWADKSYDK 159 G AG+ L R+ RW+D+ Y + Sbjct: 4 GLNAGKKLMKSRKTYRWSDRDYKR 27
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_THEVO (30S ribosomal protein S12P OS=Thermoplasma volcanium GN=rps12p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.440e-14 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ AKGI +E +GIEAKQP SAIRKC +VQLIKNG++I AF DG +NY Sbjct: 41 GAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINY 91 HSP 2 Score: 27.335 bits (59), Expect = 1.440e-14 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 88 GRGAGRMLKSHRRRPRWADKSYDK 159 G AGR L +R++ RW+D+ Y + Sbjct: 4 GLNAGRKLLENRKKFRWSDRDYKR 27
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_THEAC (30S ribosomal protein S12P OS=Thermoplasma acidophilum GN=rps12p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.872e-14 Identity = 33/51 (64.71%), Postives = 40/51 (78.43%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ AKGI +E +GIEAKQP SAIRKC +VQLIKNG++I AF DG +NY Sbjct: 41 GAPQAKGIAIEKVGIEAKQPNSAIRKCVKVQLIKNGRQITAFAVGDGAINY 91 HSP 2 Score: 26.9498 bits (58), Expect = 1.872e-14 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 88 GRGAGRMLKSHRRRPRWADKSYDK 159 G AGR L +R++ RW+D+ Y + Sbjct: 4 GINAGRKLLENRKKFRWSDRDYKR 27
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_PYRAR (30S ribosomal protein S12P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps12p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.150e-14 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ A+GIVLE +G+EA++P +A+RKC RVQL+KNGK + AFVP DG LNY Sbjct: 46 GAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNY 96 HSP 2 Score: 25.7942 bits (55), Expect = 3.150e-14 Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 1 Query: 88 GRGAGRMLKSHRRRPRWADKSYDKSHLG 171 G AG LK R+R +W D +Y + LG Sbjct: 9 GLFAGGKLKRKRKRFKWNDVTYKRKMLG 36
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_PYRIL (30S ribosomal protein S12P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps12p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.093e-14 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ A+GIVLE +G+EA++P +A+RKC RVQL+KNGK + AFVP DG LNY Sbjct: 46 GAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNY 96 HSP 2 Score: 25.409 bits (54), Expect = 4.093e-14 Identity = 12/28 (42.86%), Postives = 16/28 (57.14%), Query Frame = 1 Query: 88 GRGAGRMLKSHRRRPRWADKSYDKSHLG 171 G AG LK R+R +W D +Y + LG Sbjct: 9 GLFAGGKLKRKRKRFKWNDITYKRKMLG 36
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_METTH (30S ribosomal protein S12P OS=Methanobacterium thermoautotrophicum GN=rps12p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.337e-14 Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ A+GIV+E +GIEAKQP SAIRKC RVQLIKNGK+I AF P DG + + Sbjct: 40 GAPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQITAFAPGDGAIGF 90 HSP 2 Score: 23.0978 bits (48), Expect = 5.337e-14 Identity = 10/27 (37.04%), Postives = 15/27 (55.56%), Query Frame = 1 Query: 88 GRGAGRMLKSHRRRPRWADKSYDKSHL 168 G A + LKS R++ +W D Y + L Sbjct: 3 GLFAAKKLKSKRQKFKWKDTHYKRRSL 29
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_UNCMA (30S ribosomal protein S12P OS=Uncultured methanogenic archaeon RC-I GN=rps12p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ AKGIVLE +G+EAKQP SAIRKC R+QLIKNG++I AF P DG +N+ Sbjct: 41 GAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINF 91
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_METST (30S ribosomal protein S12P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps12p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14 Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 164 TLAMNGRSH-YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 TL +N ++ GS A+GIV+E +GIEAKQP SAIRKC RVQLIKNGK+I AF P DG + + Sbjct: 28 TLGLNIKADPLEGSPQARGIVIEKVGIEAKQPNSAIRKCVRVQLIKNGKQITAFAPGDGAIGF 90
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_METKA (30S ribosomal protein S12P OS=Methanopyrus kandleri GN=rps12p PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.607e-14 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ A+GIVLE +G+EAKQP SAIRKC RVQLIKNGK++ AF P DG ++Y Sbjct: 46 GAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKQVTAFCPGDGAIDY 96
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS12_METB6 (30S ribosomal protein S12P OS=Methanoregula boonei (strain 6A8) GN=rps12p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.935e-14 Identity = 32/51 (62.75%), Postives = 41/51 (80.39%), Query Frame = 2 Query: 197 GSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 G+ A+GIVLE +G+EAKQP SAIRKC RVQLIKNG+++ AF DG +N+ Sbjct: 41 GAPQARGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFAVGDGAINF 91 HSP 2 Score: 25.0238 bits (53), Expect = 6.935e-14 Identity = 11/33 (33.33%), Postives = 19/33 (57.58%), Query Frame = 1 Query: 85 RGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 +G+ A R L ++ RW+DK+Y + L + K Sbjct: 3 QGKFAARKLVRDSKKFRWSDKNYARRELNLDVK 35 The following BLAST results are available for this feature:
BLAST of FC876875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876875 ID=FC876875; Name=FC876875; organism=Citrus clementina; type=EST; length=354bpback to top |