FC876876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_DICDI (Zinc finger CCCH domain-containing protein 15 homolog OS=Dictyostelium discoideum GN=DDB_G0292410 PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 9.726e-48 Identity = 99/202 (49.01%), Postives = 128/202 (63.37%), Query Frame = 3 Query: 66 MPPKH-QSKAELAK-KQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV-----QPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAG-QCQKGFKCKFSHDLNVQRKGEKIDIYSDKR-DKETMEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRH 644 MPPK QSK + K K+K VEDKTFGL NKNKSK V YV ++ V Q K K + + Q KVP+GVDPKSI+CE++K G C KG +CKF+HDL RK EKIDIY+D+R D++TME+WD+ L+ VVE K + KPT I+CK+FL+++E+K+YGWFW CPNGG+ C Y+H Sbjct: 1 MPPKQAQSKKTVEKEKKKKVEDKTFGLKNKNKSKKVAAYVSQVEAQVKHSGLQNKEAALKEKAKRDKELAEKAKKEAESILVNTIVQSKVPLGVDPKSIVCEYFKQGVTCPKGNRCKFAHDLAAGRKSEKIDIYTDRRKDEDTMENWDEAKLKSVVEKKRTTENKAKPTAIICKFFLDAIESKKYGWFWECPNGGEKCAYQH 202
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: TMA46_YEAST (Translation machinery-associated protein 46 OS=Saccharomyces cerevisiae GN=TMA46 PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 6.304e-47 Identity = 91/197 (46.19%), Postives = 123/197 (62.44%), Query Frame = 3 Query: 66 MPPKHQSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR---DKETMEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK +A+ A K+K DKTFG+ NKN+S VQKY++ ++ PK ++ ++ LF V+ +V GVDPKS++C +K G C KG KCKFSHDLNV R+ EK D+Y D R + +TM++WD+E L KV+ SK+ TD VCKYF+E+VEN +YGWFW+CPNGG C YRH+ Sbjct: 1 MPPKKGKQAQAAGKKKDNVDKTFGMKNKNRSTKVQKYIKQVQSQSDPKKEEMRLKKLEEKKRREAEEAERRALFN-PVADQRVRAGVDPKSMVCALFKLGNCNKGAKCKFSHDLNVGRRMEKKDLYQDTRSEKENDTMDNWDEEKLRKVILSKHG--NPKTTTDKVCKYFIEAVENGKYGWFWICPNGGDKCMYRHS 194
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROME (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila melanogaster GN=CG8635 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.524e-44 Identity = 95/201 (47.26%), Postives = 124/201 (61.69%), Query Frame = 3 Query: 63 KMPPKHQSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQ-----PKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKET-MEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 K PP K E KK+K++EDKTFGL NK +K QK++Q +++ VQ P+ D K L +FK +Q KV G DPKS++C F+K G C KG KCKFSHDL+ + K EK IY D RD++ M +WD L++VVE K++ +Q TDI+CK+FLE+VE +YGWFW CPNGGK C YRHA Sbjct: 5 KAPPGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQSGGQHPRQDGDKRKEEKEKKLAEQREMAL--IFKPVQTQ-KVEKGTDPKSVVCAFFKQGTCTKGDKCKFSHDLSQENKVEKRSIYVDMRDEDDPMTNWDDAKLKEVVEKKSSGEKQRPTTDIICKFFLEAVEKSKYGWFWECPNGGK-CIYRHA 200
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEEL (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis elegans GN=F27D4.4 PE=2 SV=3) HSP 1 Score: 173.326 bits (438), Expect = 9.420e-43 Identity = 91/200 (45.50%), Postives = 119/200 (59.50%), Query Frame = 3 Query: 66 MPPKHQS---KAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKR----DKETMEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRH 644 MPPK Q K+E +K+K++EDKTFGL NK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+D R D+ET E+WD + L +VV KN DIVCKYFLE+VEN +YGWFW CPNGG+ C YRH Sbjct: 1 MPPKQQGPSKKSEQKRKEKVIEDKTFGLKNKKGNKN-QKFVAQVENQVRNNNTRMDLVRQQEAAKKKEKDELLDIANLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADSREVEKDEETNENWDSDKLNEVVNKKNKNKHM---IDIVCKYFLEAVENNKYGWFWECPNGGEKCQYRH 196
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_DROPS (Zinc finger CCCH domain-containing protein 15 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21225 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.042e-41 Identity = 89/203 (43.84%), Postives = 121/203 (59.61%), Query Frame = 3 Query: 66 MPPKH-----QSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKI--AVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKET--MEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK K E KK+K++EDKTFGL NK +K QK++Q +++ VQ + L ++ I V KV G DPKS++C F+K G C KG KCKFSHDL+++ K EK +Y D RD E M +WD L++VV+ K++E ++ T+I+CK+FLE+VE +YGWFW CPNG K C YRHA Sbjct: 1 MPPKKAPAGPSKKTEQKKKEKVIEDKTFGLKNKKGNKQ-QKFIQQVQKQVQAGGHHPRQDGDKKKDEKEKKLADLREMASIFKPVQTQKVDKGTDPKSVVCAFFKQGLCTKGDKCKFSHDLSLENKVEKRSMYVDMRDNEDDLMTNWDDAKLKEVVDKKHSEEKRRPTTEIICKFFLEAVEKSKYGWFWECPNGEK-CIYRHA 201
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_CAEBR (Zinc finger CCCH domain-containing protein 15 homolog OS=Caenorhabditis briggsae GN=CBG00292 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.253e-39 Identity = 89/207 (43.00%), Postives = 116/207 (56.04%), Query Frame = 3 Query: 66 MPPKH--QSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNNEYQ------------QNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRH 644 MPPK KAE +K+K++EDKTFGL NK +KN QK+V ++ V+ + + L+ + + KV VDPKS+LC F+K G C KG KCKFSHDL V +K K ++Y+DK T E+WD+E L++VV KN K + VCKYFLE+VEN +YGWFW CPNGG C YRH Sbjct: 1 MPPKQAPSKKAENKRKEKVIEDKTFGLKNKKGNKN-QKFVAQIENQVRNNNTRMDLVRQQEAAKKKEKDELLDIQNLLKPVEQKVAKDVDPKSLLCVFFKQGLCGKGAKCKFSHDLAVAQKTAKKNLYADK----TNENWDKEKLDEVVNKKNKGGHVIDIVRDFLMIFALKNQEKVCKYFLEAVENNKYGWFWECPNGGDKCQYRH 202
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: MEP33_SCHPO (mRNA export protein 33 OS=Schizosaccharomyces pombe GN=mep33 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 62/205 (30.24%), Postives = 88/205 (42.93%), Query Frame = 3 Query: 66 MPPKHQSKAE-----LAKKQ--KIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQ-SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNNEYQQNKP---TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK +K + AKK K D TFGL NKN+S VQ ++ ++QN + +K ++A +P P++ L + ++ +KID+YSD RD++T LEK +P TDIVCK+FLE+ E +YGW W CPNG C Y+HA Sbjct: 1 MPPKKAAKGKGDPGKAAKKDPTKKAADATFGLKNKNRSTKVQAKIRQIEQNAAASGSKDAKRQEALRKRREEEKRAAEAAKAEVAALFNAIPKKQTPQNFLTRKEEV------------------KESQKIDLYSDVRDQQT-----DLPLEK------------RPWINTDIVCKFFLEACETGKYGWLWQCPNGNMTCIYKHA 170 The following BLAST results are available for this feature:
BLAST of FC876876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876876 ID=FC876876; Name=FC876876; organism=Citrus clementina; type=EST; length=647bpback to top |