FC876877
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA1_RAT (DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L++ + L EALCGFQ ++ LD R ++I S+PG+I+K G K + NEGMP ++RP+ KGRL I+F V FPE G LSPD+ LE +LP R E D+ ++V + D + ++E RR + EAY++ + VQC Sbjct: 258 LFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR---HYNGEAYEDDEHHPRGGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA1_PONAB (DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L++ + L EALCGFQ ++ LD R ++I S+PG+I+K G K + NEGMP ++RP+ KGRL I+F V FPE G LSPD+ LE +LP R E D+ ++V + D + ++E RR + EAY++ + VQC Sbjct: 257 LFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR---HYNGEAYEDDEHHPRGGVQC 393
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA1_MOUSE (DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L++ + L EALCGFQ ++ LD R ++I S+PG+I+K G K + NEGMP ++RP+ KGRL I+F V FPE G LSPD+ LE +LP R E D+ ++V + D + ++E RR + EAY++ + VQC Sbjct: 258 LFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR---HYNGEAYEDDEHHPRGGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L++ + L EALCGFQ ++ LD R ++I S+PG+I+K G K + NEGMP ++RP+ KGRL I+F V FPE G LSPD+ LE +LP R E D+ ++V + D + ++E RR + EAY++ + VQC Sbjct: 258 LFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR---HYNGEAYEDDEHHPRGGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 60/144 (41.67%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L++ + L EALCGFQ ++ LD R ++I S+PG+I+K G K + NEGMP ++RP+ KGRL I+F V FPE G LSPD+ LE +LP R E D+ ++V + D + ++E RR + EAY++ + VQC Sbjct: 258 LFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR---HYNGEAYEDDEHHPRGGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNAJ1_CERAE (DnaJ homolog subfamily A member 1 OS=Cercopithecus aethiops GN=DNAJA1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.160e-23 Identity = 59/144 (40.97%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 LYVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L++ + L EALCGFQ ++ LD R ++I S+PG+I+K G K + NEGMP ++RP+ KGRL I+F + FPE G LSPD+ LE +LP R E D+ ++V + D + ++E RR + EAY++ + VQC Sbjct: 258 LFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKINFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR---HYNGEAYEDDEHHPRGGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22 Identity = 59/136 (43.38%), Postives = 83/136 (61.03%), Query Frame = 2 Query: 26 LTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L+EALCGF+ + LD R L+I S GE+IK G K I NEGMP ++ P KG + IQF V FPE LS ++ LE++LPPR ++ DD ++V + + N +E+ ++QH+EAY+E DE VQC Sbjct: 267 LSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRIT----DDMDQVELKEFNPNEQ----SWRQHREAYEEDDEEPRAGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.861e-19 Identity = 54/136 (39.71%), Postives = 82/136 (60.29%), Query Frame = 2 Query: 26 LTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQC 433 L+EALCGF+ + LD R L+I S GE+IK G + + +EGMP ++ P KG L IQF V FPE LS ++ LE++LPPR ++ DD ++V + + +E+ ++QH+EAY+E ++ VQC Sbjct: 267 LSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRIT----DDMDQVELKEFCPNEQ----NWRQHREAYEEDEDGPQAGVQC 394
BLAST of FC876877 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15 Identity = 57/150 (38.00%), Postives = 76/150 (50.67%), Query Frame = 2 Query: 5 YVDHTLILTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINNEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLPPRPGKNL-SDMELDDCEEVTM---HDVNIDEEMRRKRYQQHQEAYDEHDEPAMPRVQCAQQ 442 Y H +LT AL G Q + HLD R L I PGE I+P + K + +GM QR G LYI+F+V+FPE +P+Q LE LPPR ++ + ++C T+ V ID + E DE +E P VQCAQQ Sbjct: 262 YEAHVDLLT-ALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGMLS-QRHHQPGNLYIRFHVDFPEPNFATPEQLALLEKALPPRKIESAPKNAHTEECVLATVDPTEKVRIDNNVDPTTATSMDE--DEDEEGGHPGVQCAQQ 407 The following BLAST results are available for this feature:
BLAST of FC876877 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876877 ID=FC876877; Name=FC876877; organism=Citrus clementina; type=EST; length=713bpback to top |